FFCP PHASE1:Hg19::chr12:57482758..57482831,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4665 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7627 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000555857_5end | |||
|description=CAGE_peak_2_at_NAB2_5end | |||
|id=chr12:57482758..57482831,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.96e-11!180;CL:0000393!1.14e-07!60;CL:0000211!1.14e-07!60;CL:0000183!2.19e-07!59;CL:0000680!3.74e-07!57;CL:0000056!3.74e-07!57;CL:0000355!3.74e-07!57;CL:0000187!6.87e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.33e-08,61;CL:0000211,4.33e-08,61;CL:0000680,1.44e-07,58;CL:0000056,1.44e-07,58;CL:0000355,1.44e-07,58;CL:0000187,2.64e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!7.23e-09!659;UBERON:0002204!4.14e-08!167;UBERON:0000922!1.36e-07!612;UBERON:0004290!3.53e-07!70;UBERON:0002100!4.53e-07!216;UBERON:0000926!5.32e-07!448;UBERON:0004120!5.32e-07!448;UBERON:0006603!5.32e-07!448;UBERON:0002050!8.59e-07!605;UBERON:0005423!8.59e-07!605;UBERON:0002385!8.77e-07!63;UBERON:0001015!8.77e-07!63;UBERON:0000383!8.77e-07!63;UBERON:0000914!8.84e-07!83;UBERON:0002329!8.84e-07!83;UBERON:0003077!8.84e-07!83;UBERON:0003059!8.84e-07!83;UBERON:0007282!8.84e-07!83;UBERON:0009618!8.84e-07!83;UBERON:0007285!8.84e-07!83;UBERON:0001134!9.96e-07!61;UBERON:0002036!9.96e-07!61;UBERON:0003082!9.96e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.43e-09,167;UBERON:0007503,2.63e-08,78;UBERON:0007524,6.52e-08,73;UBERON:0003077,1.18e-07,72;UBERON:0007285,1.18e-07,72;UBERON:0002329,1.47e-07,71;UBERON:0003059,1.47e-07,71;UBERON:0007282,1.47e-07,71;UBERON:0004290,1.47e-07,71;UBERON:0009618,1.47e-07,71;UBERON:0000922,2.89e-07,592;UBERON:0002385,3.61e-07,64;UBERON:0001015,3.61e-07,64;UBERON:0000383,3.61e-07,64;UBERON:0001134,4.08e-07,62;UBERON:0002036,4.08e-07,62;UBERON:0003082,4.08e-07,62;UBERON:0000486,8.03e-07,83 | |||
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| |||
|short_description=p2@NAB2 | |||
}} |
Revision as of 14:06, 11 January 2014
Short description: | p2@NAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NAB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000555857_5end |
EntrezGene: | NAB2 |
HGNC: | 7627 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.33e-08 | 61 |
electrically active cell | 4.33e-08 | 61 |
muscle precursor cell | 1.44e-07 | 58 |
myoblast | 1.44e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.44e-07 | 58 |
muscle cell | 2.64e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.43e-09 | 167 |
epithelial vesicle | 2.63e-08 | 78 |
dense mesenchyme tissue | 6.52e-08 | 73 |
paraxial mesoderm | 1.18e-07 | 72 |
presumptive paraxial mesoderm | 1.18e-07 | 72 |
somite | 1.47e-07 | 71 |
presomitic mesoderm | 1.47e-07 | 71 |
presumptive segmental plate | 1.47e-07 | 71 |
dermomyotome | 1.47e-07 | 71 |
trunk paraxial mesoderm | 1.47e-07 | 71 |
embryo | 2.89e-07 | 592 |
muscle tissue | 3.61e-07 | 64 |
musculature | 3.61e-07 | 64 |
musculature of body | 3.61e-07 | 64 |
skeletal muscle tissue | 4.08e-07 | 62 |
striated muscle tissue | 4.08e-07 | 62 |
myotome | 4.08e-07 | 62 |
multilaminar epithelium | 8.03e-07 | 83 |