FFCP PHASE1:Hg19::chr12:96429385..96429415,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4048 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6710 | |||
|TSSclassifier=strong | |||
|UniProt=B4DEH5 | |||
|association_with_transcript=3bp_to_ENST00000548852_5end | |||
|description=CAGE_peak_2_at_LTA4H_5end | |||
|id=chr12:96429385..96429415,- | |||
|ontology_enrichment_celltype=CL:0002194!1.33e-13!63;CL:0000576!1.33e-13!63;CL:0000040!1.33e-13!63;CL:0000559!1.33e-13!63;CL:0002009!1.04e-12!65;CL:0002057!3.10e-12!42;CL:0000860!4.72e-11!45;CL:0000766!6.17e-11!76;CL:0000557!6.86e-09!71;CL:0000839!8.18e-09!70;CL:0000048!2.27e-07!430;CL:0002087!4.93e-07!119;CL:0000723!6.10e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000576;6.07e-09;48!CL:0000473;8.69e-09;39!CL:0000234;8.69e-09;39!CL:0000860;9.31e-08;33!CL:0002057;9.31e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.59e-15,59;CL:0000576,3.59e-15,59;CL:0000040,3.59e-15,59;CL:0000559,3.59e-15,59;CL:0000473,1.53e-14,48;CL:0000234,1.53e-14,48;CL:0002009,3.70e-14,61;CL:0000860,3.10e-12,42;CL:0002057,3.10e-12,42;CL:0000766,4.53e-12,72;CL:0000557,6.70e-10,67;CL:0000839,7.91e-10,66;CL:0000048,1.20e-07,427;CL:0002087,1.30e-07,115;CL:0000723,3.31e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.77e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.17e-11!167;UBERON:0002193!9.20e-09!112;UBERON:0004765!1.07e-08!101;UBERON:0001434!1.07e-08!101;UBERON:0002371!4.43e-08!80;UBERON:0002390!7.84e-08!102;UBERON:0003061!7.84e-08!102;UBERON:0001474!2.40e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.66e-13,167;UBERON:0001434,1.68e-10,100;UBERON:0004765,7.38e-10,90;UBERON:0002193,1.77e-09,108;UBERON:0000926,1.93e-09,315;UBERON:0004120,1.93e-09,315;UBERON:0006603,1.93e-09,315;UBERON:0002405,3.53e-09,93;UBERON:0002371,6.17e-09,76;UBERON:0002390,1.56e-08,98;UBERON:0003061,1.56e-08,98;UBERON:0001474,4.24e-08,82;UBERON:0003081,1.38e-07,203 | |||
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| |||
|short_description=p2@LTA4H | |||
}} |
Revision as of 15:19, 11 January 2014
Short description: | p2@LTA4H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LTA4H_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENST00000548852_5end |
EntrezGene: | LTA4H |
HGNC: | 6710 |
UniProt: | B4DEH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.59e-15 | 59 |
monocyte | 3.59e-15 | 59 |
monoblast | 3.59e-15 | 59 |
promonocyte | 3.59e-15 | 59 |
defensive cell | 1.53e-14 | 48 |
phagocyte | 1.53e-14 | 48 |
macrophage dendritic cell progenitor | 3.70e-14 | 61 |
classical monocyte | 3.10e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.10e-12 | 42 |
myeloid leukocyte | 4.53e-12 | 72 |
granulocyte monocyte progenitor cell | 6.70e-10 | 67 |
myeloid lineage restricted progenitor cell | 7.91e-10 | 66 |
multi fate stem cell | 1.20e-07 | 427 |
nongranular leukocyte | 1.30e-07 | 115 |
somatic stem cell | 3.31e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.66e-13 | 167 |
skeletal system | 1.68e-10 | 100 |
skeletal element | 7.38e-10 | 90 |
hemolymphoid system | 1.77e-09 | 108 |
mesoderm | 1.93e-09 | 315 |
mesoderm-derived structure | 1.93e-09 | 315 |
presumptive mesoderm | 1.93e-09 | 315 |
immune system | 3.53e-09 | 93 |
bone marrow | 6.17e-09 | 76 |
hematopoietic system | 1.56e-08 | 98 |
blood island | 1.56e-08 | 98 |
bone element | 4.24e-08 | 82 |
lateral plate mesoderm | 1.38e-07 | 203 |