FFCP PHASE1:Hg19::chr12:112585995..112586005,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:112585995..112586005,+ | |||
|id=chr12:112585995..112586005,+ | |||
|ontology_enrichment_celltype=CL:0000453!4.93e-13!5;CL:0000990!1.60e-12!8;CL:0000451!5.22e-10!10;CL:0002541!1.16e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.06e-45;5!CL:0000990;1.31e-25;8!CL:0000451;4.98e-21;10!CL:0002577;1.05e-19;3!CL:0000349;3.81e-12;19!CL:0000039;5.37e-09;7!CL:0000586;5.37e-09;7!CL:0001014;2.31e-08;2!CL:0001016;2.31e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,7.08e-46,5;CL:0000990,1.05e-25,8;CL:0000451,4.16e-21,10;CL:0002577,1.27e-19,3;CL:0000349,4.54e-12,19;CL:0000039,5.37e-09,7;CL:0000586,5.37e-09,7;CL:0001014,2.48e-08,2;CL:0001016,2.48e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;9.28e-16;1!DOID:10165;9.28e-16;1!DOID:1798;9.28e-16;1!DOID:4468;1.29e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,9.99e-16,1;DOID:10165,9.99e-16,1;DOID:1798,9.99e-16,1;DOID:4468,1.39e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0003124!3.95e-12!7;UBERON:0005631!7.91e-10!14;UBERON:0000158!7.91e-10!14;UBERON:0000476!1.16e-07!3;UBERON:0000920!1.16e-07!3;UBERON:0004923!5.02e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;4.88e-15;4!UBERON:0000478;1.13e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,1.23e-18,7;UBERON:0005631,2.91e-16,14;UBERON:0000158,2.91e-16,14;UBERON:0001987,5.63e-15,4;UBERON:0004340,5.63e-15,4;UBERON:0000478,1.30e-09,24 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,1.20956117331872,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,1.19372242368845,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0,1.84451123510448,0.807818799687949,1.4124158349861,0.31900115973192,0.183195186803725,1.5991043280559,0,0,0,0.225595660617181,0,0,0,0,0,3.10142335502381,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0.174118413160805,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,1.5476039091159,0,0,0,0,0,0,3.64638874906946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0.197611631897944,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0.192619830407303,0,0.782982875895635,0,0.231522474323834,0.489473409012935,0,0,0,0,0,0,0,0,0,0,1.94860308839388,2.65729680626726,3.10774249086104,0,0,0.633936370075881,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,2.09525355585138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0.171488009437418,0.0679697329768317,0,0,0,0,0,0.840816489941367,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.61193297845189,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr12:112585995..112586005,+ | |||
}} |
Revision as of 15:58, 11 January 2014
Short description: | p@chr12:112585995..112586005, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:112585995..112586005, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 7.08e-46 | 5 |
conventional dendritic cell | 1.05e-25 | 8 |
dendritic cell | 4.16e-21 | 10 |
placental epithelial cell | 1.27e-19 | 3 |
extraembryonic cell | 4.54e-12 | 19 |
germ line cell | 5.37e-09 | 7 |
germ cell | 5.37e-09 | 7 |
CD1a-positive Langerhans cell | 2.48e-08 | 2 |
immature CD1a-positive Langerhans cell | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chorion | 1.23e-18 | 7 |
extraembryonic membrane | 2.91e-16 | 14 |
membranous layer | 2.91e-16 | 14 |
placenta | 5.63e-15 | 4 |
allantois | 5.63e-15 | 4 |
extraembryonic structure | 1.30e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 9.99e-16 | 1 |
endocrine pancreas cancer | 9.99e-16 | 1 |
pancreatic endocrine carcinoma | 9.99e-16 | 1 |
clear cell adenocarcinoma | 1.39e-08 | 2 |