FFCP PHASE1:Hg19::chr12:117295919..117295923,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283454 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=44bp_to_AK094730_5end | |||
|description=CAGE_peak_1_at_LOC283454_5end | |||
|id=chr12:117295919..117295923,- | |||
|ontology_enrichment_celltype=CL:0000148!2.27e-12!10;CL:0000541!2.27e-12!10;CL:0000147!4.55e-10!14;CL:0002322!1.01e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000148;8.30e-23;10!CL:0002567;9.52e-20;3!CL:0000147;2.11e-16;14!CL:0000785;5.56e-16;1!CL:0000819;5.56e-16;1!CL:0000710;1.41e-11;20!CL:0002077;7.19e-10;34!CL:0000075;1.21e-08;27!CL:0000123;2.23e-08;2!CL:0000242;2.23e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.28e-23,10;CL:0000541,5.28e-23,10;CL:0002567,9.53e-20,3;CL:0000147,1.53e-16,14;CL:0000819,5.56e-16,1;CL:0000710,1.13e-11,20;CL:0002077,1.84e-10,34;CL:0000075,1.03e-08,27;CL:0000785,1.20e-08,2;CL:0000955,1.20e-08,2;CL:0000818,1.20e-08,2;CL:0000954,1.20e-08,2;CL:0000816,1.20e-08,2;CL:0000242,1.86e-08,2;CL:0000333,2.90e-08,41 | |||
|ontology_enrichment_development_v019=CL:0000954;1.20e-08;2 | |||
|ontology_enrichment_disease=DOID:3095!8.26e-07!22;DOID:2994!8.26e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:0060073;5.56e-16;1!DOID:8675;5.56e-16;1!DOID:1909;2.23e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,5.56e-16,1;DOID:8675,5.56e-16,1;DOID:1909,2.48e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002780!3.68e-14!41;UBERON:0001890!3.68e-14!41;UBERON:0006240!3.68e-14!41;UBERON:0003080!1.15e-13!42;UBERON:0000073!2.24e-13!94;UBERON:0001016!2.24e-13!94;UBERON:0001049!4.38e-13!57;UBERON:0005068!4.38e-13!57;UBERON:0006241!4.38e-13!57;UBERON:0007135!4.38e-13!57;UBERON:0001017!2.28e-11!82;UBERON:0002616!2.35e-11!59;UBERON:0002619!2.62e-11!22;UBERON:0005743!2.71e-11!86;UBERON:0000955!4.33e-11!69;UBERON:0006238!4.33e-11!69;UBERON:0001893!1.49e-10!34;UBERON:0002791!8.83e-10!33;UBERON:0000956!1.58e-09!25;UBERON:0000203!1.58e-09!25;UBERON:0001950!3.82e-09!20;UBERON:0002346!4.35e-09!90;UBERON:0003075!4.94e-09!86;UBERON:0007284!4.94e-09!86;UBERON:0001869!5.95e-09!32;UBERON:0000349!9.33e-09!5;UBERON:0007023!2.42e-08!115;UBERON:0003056!2.73e-08!61;UBERON:0002020!3.96e-08!34;UBERON:0003528!3.96e-08!34;UBERON:0000924!6.77e-07!173;UBERON:0006601!6.77e-07!173;UBERON:0004121!9.20e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.92e-15;1!UBERON:0009842;1.92e-15;1!UBERON:0003704;1.92e-15;1!UBERON:0001171;1.92e-15;1!UBERON:0001172;1.92e-15;1!UBERON:0001954;1.39e-08;2!UBERON:0003022;1.39e-08;2!UBERON:0002421;1.39e-08;2!UBERON:0002600;1.39e-08;2!UBERON:0000007;2.23e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.75e-15,1;UBERON:0009842,2.75e-15,1;UBERON:0003704,2.75e-15,1;UBERON:0001171,2.75e-15,1;UBERON:0001172,2.75e-15,1;UBERON:0001954,1.39e-08,2;UBERON:0003022,1.39e-08,2;UBERON:0002421,1.39e-08,2;UBERON:0002600,1.39e-08,2;UBERON:0000007,2.00e-08,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542270404062111,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0.651083453856419,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.397589304964456,0.464775771478074,0.10366105501537,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0.317489471460845,1.14596527667483,1.17217447210047,0,1.43958489784653,0.600686115687835,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0.640944426764839,0.962479855263359,0.245040215981032,0,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0.994147647766298,0.844016498463076,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,2.90799823828566,0.185536196323703,0,0,0,0,0.227586896570999,0,0,0,0.583209226766509,0,0,0,0,0,0,0.87754158861589,0,0.557694977114413,0,1.13942055847001,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0.471807930864739,0,0.234264445725339,5.10873409803865,0.19566461893209,0,0,0,0.30607276163049,0,0.300646838828985,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0.189932387867636,0,0,0,0.599428828746391,0.72045208577053,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,2.38568906942791,0.272406812223151,0.321506296930038,0.137539436597234,0,0,0,0.668245123238271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0.0620964029413835,0.138348634936231,0,0.151649117541648,1.14186133417987,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0,0,1.0362910251936,0,0.276516872303462,0,0,0.163565394255844,0,0.245772908753719,0,0,0.213383459388282,0.172214979660816,0,0,0,0,0.255788742607303,0.107824811396682,0.314531883711793,0.327628914576042,0,0,0.743614585554013,0,0,0.0788617450012534,0,0,0,0.578063025868136,0,0.159633859057151,0,0,0.414943514785307,0.322951291263702,0,0,0,0.183428598521679,0.231051332300676,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0,0.202612753855184,0,0,0.126831620387814,0.546974809018219,0,0,0,0.383287282918786,0,0,1.21393120847326,0.455324382702595,0,0,0,0.0679697329768317,0.394636641377094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.4582137370881,0,0,0,0,0,0,0.102662806856247,0,0,0.233939463462106,0,0,0.22589216407792,0,0.905777061400041,0,0,0,0,0.471353094203252,0.196308467114945,0,0,0,0,0,0,0.71421575442263,0,0.0802413666891683,0,0,0.143339583151451,0.157771562193185,0.339957450954573,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0.407955318967927,0.26721740526556,0.0918948995348449,0.50141507858475,0,0,0.829169439458779,0.103432995861895,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@LOC283454 | |||
}} |
Revision as of 16:08, 11 January 2014
Short description: | p1@LOC283454 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC283454_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_AK094730_5end |
EntrezGene: | LOC283454 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.28e-23 | 10 |
melanoblast | 5.28e-23 | 10 |
light melanocyte | 9.53e-20 | 3 |
pigment cell | 1.53e-16 | 14 |
B-1 B cell | 5.56e-16 | 1 |
neurecto-epithelial cell | 1.13e-11 | 20 |
ecto-epithelial cell | 1.84e-10 | 34 |
columnar/cuboidal epithelial cell | 1.03e-08 | 27 |
mature B cell | 1.20e-08 | 2 |
pre-B-II cell | 1.20e-08 | 2 |
transitional stage B cell | 1.20e-08 | 2 |
small pre-B-II cell | 1.20e-08 | 2 |
immature B cell | 1.20e-08 | 2 |
Merkel cell | 1.86e-08 | 2 |
migratory neural crest cell | 2.90e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 2.75e-15 | 1 |
acinus | 2.75e-15 | 1 |
intrahepatic bile duct | 2.75e-15 | 1 |
portal lobule | 2.75e-15 | 1 |
hepatic acinus | 2.75e-15 | 1 |
Ammon's horn | 1.39e-08 | 2 |
lobe parts of cerebral cortex | 1.39e-08 | 2 |
hippocampal formation | 1.39e-08 | 2 |
limbic lobe | 1.39e-08 | 2 |
pituitary gland | 2.00e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 5.56e-16 | 1 |
lymphosarcoma | 5.56e-16 | 1 |
melanoma | 2.48e-08 | 2 |