FFCP PHASE1:Hg19::chr12:120897781..120897785,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:120897781..120897785,+ | |||
|id=chr12:120897781..120897785,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;4.10e-23;1!CL:0002615;9.31e-09;3!CL:0000306;9.10e-07;4!CL:0002222;9.10e-07;4!CL:0002224;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,5.13e-23,1;CL:0002615,1.04e-08,3;CL:0000306,8.14e-07,4;CL:0002222,8.14e-07,4;CL:0002224,8.14e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;1.75e-12;2!UBERON:0000078;2.90e-12;2!UBERON:0002012;2.90e-12;2!UBERON:0008886;2.90e-12;2!UBERON:0010077;9.10e-07;4!UBERON:0005389;9.10e-07;4!UBERON:0000484;9.10e-07;4!UBERON:0000965;9.10e-07;4!UBERON:0001803;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,1.65e-12,2;UBERON:0000078,3.24e-12,2;UBERON:0007497,3.24e-12,2;UBERON:0003643,3.24e-12,2;UBERON:0003504,3.24e-12,2;UBERON:0003469,3.24e-12,2;UBERON:0003496,3.24e-12,2;UBERON:0002012,3.24e-12,2;UBERON:0008886,3.24e-12,2;UBERON:0007303,3.24e-12,2;UBERON:0002061,3.24e-12,2;UBERON:0005432,3.24e-12,2;UBERON:0004363,3.24e-12,2;UBERON:0004145,1.40e-08,3;UBERON:0010077,8.14e-07,4;UBERON:0005389,8.14e-07,4;UBERON:0000484,8.14e-07,4;UBERON:0002546,8.14e-07,4;UBERON:0000965,8.14e-07,4;UBERON:0001803,8.14e-07,4;UBERON:0003073,8.14e-07,4;UBERON:0005426,8.14e-07,4 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,2.00146596706261,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0.123121058076788,0,0,0.286235987131057,0.410623275218653,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0.30120591877825,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.534880391567015,0,0,0,0,0,0,0.289693037921647,0,0,0,0.221729397462564,0.263504357079378,0,0,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0.302714855289863,0.576175924479999,0,0,0,0.149448680551801,0.352303495931295,0,0,0,0.245668634623536,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0,0,0.194874010322397,0.252433774244115,0.184099797284599,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.441175890929576,0.217879444092406,0,0.134831308160164,0.392442930250692,0,0,0,0,0,1.26755034821831,0,0,0,0.368965315629341,0,0,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,1.44331342025273,0.115930404975077,0,0.144366447761074,0,0,0.790204397959275,0,0.246217006087397,0,0.148631162288728,0,0,0,0.0895585227028483,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0.43596006883328,0,0,0,0,0,2.08014873822732,0,0,0.799266537048298,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0.821905290201534,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0,0,0.356857977594324,0,0,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0,0,0,0.483437798366489,0,0,0.459257792658427,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0.219259876645935,0,0,0,0,0,0.0915694648183434,0,0,0.650060246036521,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0.107420244868274,0.145016693914229,0.255679882248303,0,0.165284915360978,0,0,0.10115778085555,2.32422774648643,0,0,0.308033580176089,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0.141405431953713,1.13008116620243,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.282431402330337,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.439524537815682,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0.20453736500431,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0.260427761085233,0,0.724999575434793,0,0,0,0.344743373241465,0,0.173624994933292,0,0.241192877250816,0,0.221158519862449,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0.995261931078505,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0.729819156862664,0.19566461893209,0.242780379534093,0,0,0,0,0,0,0,0.661983911750998,0,0,0,0,0.173559738335131,0.195984794828755,0.0870592065804026,0,0.171986032471617,0.19351266257817,0,0.328461828212837,0,0,0.225980740780532,0,0,0.189932387867636,0.391102765469606,0,0,0.39961921916426,0.144090417154106,0,0,0.432164393964449,0.124252535565433,0.471388069233591,0,0.209205692624666,0,0,0,0,0,0.859530882839914,0,0,0,0,0.399358000997982,0,0,0,0,0,0.315132729228895,0.329663433524666,0.0674035438541849,0.196854963029498,0.0846733320657845,0.795229689809303,0.136203406111576,0.321506296930038,0.137539436597234,0.83088067605837,0,0,0.121499113316049,0,0.0788057072991982,0,0,0.35857467866569,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0.226624183040251,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,2.19647276823534,0.1251909307065,0.573409195690071,0,0.0620964029413835,0.415045904808692,0,0,0,0.470531639396343,0.468334905806882,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0,0,0,0.453692771289717,0.15543720058278,0.295710299979268,0.318593534327405,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0.800055529326307,0,0.336749488765919,0,0,0,0.260994291965212,0.226705925512272,0,0,0.179088841081487,0.308801447160972,0,0,0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| |||
|short_description=p@chr12:120897781..120897785,+ | |||
}} |
Revision as of 16:16, 11 January 2014
Short description: | p@chr12:120897781..120897785, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:120897781..120897785, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 5.13e-23 | 1 |
adipocyte of omentum tissue | 1.04e-08 | 3 |
crystallin accumulating cell | 8.14e-07 | 4 |
vertebrate lens cell | 8.14e-07 | 4 |
lens epithelial cell | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 1.65e-12 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 3.24e-12 | 2 |
developing epithelial placode | 3.24e-12 | 2 |
respiratory system arterial blood vessel | 3.24e-12 | 2 |
respiratory system blood vessel | 3.24e-12 | 2 |
respiratory system artery | 3.24e-12 | 2 |
head blood vessel | 3.24e-12 | 2 |
pulmonary artery | 3.24e-12 | 2 |
pulmonary vascular system | 3.24e-12 | 2 |
pharyngeal vasculature | 3.24e-12 | 2 |
truncus arteriosus | 3.24e-12 | 2 |
aortic sac | 3.24e-12 | 2 |
pharyngeal arch artery | 3.24e-12 | 2 |
outflow tract | 1.40e-08 | 3 |
cuboidal epithelium | 8.14e-07 | 4 |
transparent eye structure | 8.14e-07 | 4 |
simple cuboidal epithelium | 8.14e-07 | 4 |
cranial placode | 8.14e-07 | 4 |
lens of camera-type eye | 8.14e-07 | 4 |
epithelium of lens | 8.14e-07 | 4 |
lens placode | 8.14e-07 | 4 |
lens vesicle | 8.14e-07 | 4 |