FFCP PHASE1:Hg19::chr13:34922173..34922187,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C744 | |||
|description=CAGE_peak_at_chr13:34922173..34922187,+ | |||
|id=chr13:34922173..34922187,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.40e-12;1!CL:0000164;1.40e-12;1!CL:0000502;1.40e-12;1!CL:0000172;1.40e-12;1!CL:0000173;1.40e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.40e-12,1;CL:0000164,1.40e-12,1;CL:0000502,1.40e-12,1;CL:0000172,1.40e-12,1;CL:0000173,1.40e-12,1;CL:0002351,1.40e-12,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.49e-23;2!UBERON:0008425;8.35e-13;1!UBERON:0008801;9.92e-13;1!UBERON:0006298;1.11e-12;1!UBERON:0005754;1.25e-12;1!CL:0002351;1.40e-12;1!UBERON:0006242;3.26e-12;1!UBERON:0003918;1.44e-10;10!UBERON:0007687;1.44e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.40e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.40e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.08e-27!115;UBERON:0002298!8.68e-16!8;UBERON:0001049!1.84e-13!57;UBERON:0005068!1.84e-13!57;UBERON:0006241!1.84e-13!57;UBERON:0007135!1.84e-13!57;UBERON:0003076!1.57e-10!15;UBERON:0003057!1.57e-10!15;UBERON:0006947!4.71e-10!3;UBERON:0004054!4.71e-10!3;UBERON:0004111!6.17e-10!241;UBERON:0002616!6.24e-10!59;UBERON:0001896!4.17e-09!3;UBERON:0005290!4.17e-09!3;UBERON:0010096!4.17e-09!3;UBERON:0006331!1.14e-08!3;UBERON:0000988!2.09e-08!3;UBERON:0003075!2.91e-08!86;UBERON:0007284!2.91e-08!86;UBERON:0005743!4.11e-08!86;UBERON:0000153!5.25e-08!129;UBERON:0007811!5.25e-08!129;UBERON:0000033!8.21e-08!123;UBERON:0001017!8.70e-08!82;UBERON:0000955!9.66e-08!69;UBERON:0006238!9.66e-08!69;UBERON:0002346!1.10e-07!90;UBERON:0005904!1.31e-07!4;UBERON:0000475!1.41e-07!365;UBERON:0004733!1.53e-07!12;UBERON:0002028!1.53e-07!12;UBERON:0007277!1.53e-07!12;UBERON:0002308!2.16e-07!9;UBERON:0000125!2.16e-07!9;UBERON:0001829!2.78e-07!2;UBERON:0000073!6.47e-07!94;UBERON:0001016!6.47e-07!94;UBERON:0004732!6.61e-07!13;UBERON:0000477!7.98e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.59e-34;3!UBERON:0004054;2.59e-34;3!UBERON:0005904;6.37e-26;4!UBERON:0001829;1.26e-23;2!UBERON:0001044;1.09e-17;6!UBERON:0003293;1.09e-17;6!UBERON:0003294;1.09e-17;6!UBERON:0010047;1.09e-17;6!UBERON:0003408;1.09e-17;6!UBERON:0000167;1.09e-17;6!UBERON:0001000;8.35e-13;1!UBERON:0005352;8.35e-13;1!UBERON:0001831;9.92e-13;1!UBERON:0001567;9.92e-13;1!UBERON:0001736;1.11e-12;1!UBERON:0000998;1.25e-12;1!UBERON:0006868;1.25e-12;1!UBERON:0001301;1.75e-12;1!UBERON:0000058;9.70e-11;10!UBERON:0003135;8.22e-10;11!UBERON:0003101;2.33e-08;22!UBERON:0000079;2.33e-08;22!UBERON:0001041;6.82e-08;14!UBERON:0004089;5.41e-07;2!UBERON:0000341;9.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.45e-34,3;UBERON:0004054,2.45e-34,3;UBERON:0005904,6.11e-26,4;UBERON:0001829,1.26e-23,2;UBERON:0001044,1.09e-17,6;UBERON:0003293,1.09e-17,6;UBERON:0003294,1.09e-17,6;UBERON:0010047,1.09e-17,6;UBERON:0000167,1.09e-17,6;UBERON:0001000,8.85e-13,1;UBERON:0005352,8.85e-13,1;UBERON:0001831,9.92e-13,1;UBERON:0001567,9.92e-13,1;UBERON:0008801,9.92e-13,1;UBERON:0001736,1.11e-12,1;UBERON:0006298,1.11e-12,1;UBERON:0000998,1.25e-12,1;UBERON:0006868,1.25e-12,1;UBERON:0001301,1.57e-12,1;UBERON:0007023,2.59e-12,114;UBERON:0003408,7.57e-11,10;UBERON:0003135,8.10e-10,11;UBERON:0000489,7.82e-09,31;UBERON:0003101,2.20e-08,22;UBERON:0000079,2.20e-08,22;UBERON:0002113,4.54e-07,26;UBERON:0003918,4.54e-07,26;UBERON:0011143,4.54e-07,26;UBERON:0005095,4.54e-07,26;UBERON:0007687,4.54e-07,26;UBERON:0004089,5.41e-07,2;UBERON:0000341,9.54e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0.994147647766298,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0,0,0.260427761085233,9.62059999958153,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0,0,0,0,9.47002566838537,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,2.62090002363045,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.240476460754601,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44297692627514,1.57363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,2.11444506695002,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,1.14681839138014,0.221858103073705,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0.147856086217045,0.0675375846183947,0,0,0.126831620387814,0,7.12735096914337,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0.171488009437418,0.135939465953663,0,0,0.222462803784138,1.88383422841234,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,11.6161386881475,0,0,4.23387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,3.53514820652439,0.981542335574726,1.18818560130834,0,0,0,0,0,0.357107877211315,0.352894871715692,1.92579280054004,0,5.04602211744995,0.286679166302903,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.310298987585686,1.49263787330687,0,0,0,0,0,0,0.217716747896961,0,0.202056159043763,0.573777643141411,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr13:34922173..34922187,+ | |||
}} |
Revision as of 17:18, 11 January 2014
Short description: | p@chr13:34922173..34922187, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:34922173..34922187, + |
Coexpression cluster: | C744_breast_salivary_parotid_submaxillary_seminal_small_ductus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.40e-12 | 1 |
enteroendocrine cell | 1.40e-12 | 1 |
type D enteroendocrine cell | 1.40e-12 | 1 |
somatostatin secreting cell | 1.40e-12 | 1 |
pancreatic D cell | 1.40e-12 | 1 |
progenitor cell of endocrine pancreas | 1.40e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.45e-34 | 3 |
internal male genitalia | 2.45e-34 | 3 |
duct of male reproductive system | 6.11e-26 | 4 |
major salivary gland | 1.26e-23 | 2 |
saliva-secreting gland | 1.09e-17 | 6 |
gland of oral region | 1.09e-17 | 6 |
gland of foregut | 1.09e-17 | 6 |
oral gland | 1.09e-17 | 6 |
oral cavity | 1.09e-17 | 6 |
vas deferens | 8.85e-13 | 1 |
spermatic cord | 8.85e-13 | 1 |
parotid gland | 9.92e-13 | 1 |
cheek | 9.92e-13 | 1 |
parotid gland primordium | 9.92e-13 | 1 |
submandibular gland | 1.11e-12 | 1 |
submandibular gland primordium | 1.11e-12 | 1 |
seminal vesicle | 1.25e-12 | 1 |
seminal fluid secreting gland | 1.25e-12 | 1 |
epididymis | 1.57e-12 | 1 |
adult organism | 2.59e-12 | 114 |
gland of gut | 7.57e-11 | 10 |
male reproductive organ | 8.10e-10 | 11 |
cavitated compound organ | 7.82e-09 | 31 |
male organism | 2.20e-08 | 22 |
male reproductive system | 2.20e-08 | 22 |
kidney | 4.54e-07 | 26 |
kidney mesenchyme | 4.54e-07 | 26 |
upper urinary tract | 4.54e-07 | 26 |
kidney rudiment | 4.54e-07 | 26 |
kidney field | 4.54e-07 | 26 |
midface | 5.41e-07 | 2 |
throat | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.40e-12 | 1 |