FFCP PHASE1:Hg19::chr14:100541182..100541217,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000554245_5end | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_1_at_ENST00000554245_5end | |||
|id=chr14:100541182..100541217,- | |||
|ontology_enrichment_celltype=CL:0000625!8.35e-20!11;CL:0000623!1.31e-19!3;CL:0000825!1.31e-19!3;CL:0000084!8.78e-19!25;CL:0000827!8.78e-19!25;CL:0000838!1.27e-17!52;CL:0000542!3.06e-17!53;CL:0000051!3.06e-17!53;CL:0000791!5.00e-16!18;CL:0000789!5.00e-16!18;CL:0002420!5.00e-16!18;CL:0002419!5.00e-16!18;CL:0000790!5.00e-16!18;CL:0000738!6.69e-15!140;CL:0000037!2.43e-11!172;CL:0000566!2.43e-11!172;CL:0002087!2.63e-11!119;CL:0000988!1.74e-10!182;CL:0002031!2.43e-09!124;CL:0000842!8.23e-09!3;CL:0002032!2.58e-08!165;CL:0000837!2.58e-08!165;CL:0000946!3.40e-07!1;CL:0000786!3.40e-07!1;CL:0000980!3.40e-07!1;CL:0000224!8.19e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000623;9.45e-18;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,9.46e-18,3;CL:0000825,9.46e-18,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.34e-14!7;UBERON:0002106!1.27e-08!3;UBERON:0004854!1.27e-08!3;UBERON:0009034!1.27e-08!3;UBERON:0002095!1.27e-08!3;UBERON:0004782!1.27e-08!3;UBERON:0003281!1.27e-08!3;UBERON:0009664!1.27e-08!3;UBERON:0002296!1.27e-08!3;UBERON:0005602!1.27e-08!3;UBERON:0001179!1.27e-08!3;UBERON:0006293!1.27e-08!3;UBERON:0002370!2.01e-07!4;UBERON:0005058!2.01e-07!4;UBERON:0009113!2.01e-07!4;UBERON:0003295!2.01e-07!4;UBERON:0005562!2.01e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.56e-98;2!UBERON:0005058;2.56e-98;2!UBERON:0009113;2.56e-98;2!UBERON:0004177;3.31e-40;5!UBERON:0005057;3.31e-40;5!UBERON:0000077;2.22e-08;27!UBERON:0002405;2.22e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.60e-50,4;UBERON:0005058,6.60e-50,4;UBERON:0009113,6.60e-50,4;UBERON:0003295,6.60e-50,4;UBERON:0005562,6.60e-50,4;UBERON:0003351,9.87e-34,6;UBERON:0004177,4.21e-29,7;UBERON:0005057,4.21e-29,7;UBERON:0000974,9.44e-21,10;UBERON:0003408,9.44e-21,10;UBERON:0001042,9.44e-21,10;UBERON:0009145,9.44e-21,10;UBERON:0006562,5.63e-19,11;UBERON:0009722,5.63e-19,11;UBERON:0007690,5.63e-19,11;UBERON:0008814,4.81e-12,18;UBERON:0001557,1.81e-11,19;UBERON:0004807,4.06e-08,28;UBERON:0000077,7.15e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0,0.318565414324097,0.651083453856419,0.950452044448374,0.301150238155546,0.255973222308837,0,0,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,1.50939302401662,0.385029108839245,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,3.05909926398181,0.956557636372934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,1.22718928688412,1.61394257169231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000554245 | |||
}} |
Revision as of 21:54, 11 January 2014
Short description: | p1@ENST00000554245 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000554245_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | 0bp_to_ENST00000554245_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 9.46e-18 | 3 |
pro-NK cell | 9.46e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 6.60e-50 | 4 |
hemolymphoid system gland | 6.60e-50 | 4 |
thymic region | 6.60e-50 | 4 |
pharyngeal gland | 6.60e-50 | 4 |
thymus primordium | 6.60e-50 | 4 |
pharyngeal epithelium | 9.87e-34 | 6 |
hemopoietic organ | 4.21e-29 | 7 |
immune organ | 4.21e-29 | 7 |
neck | 9.44e-21 | 10 |
gland of gut | 9.44e-21 | 10 |
chordate pharynx | 9.44e-21 | 10 |
pharyngeal region of foregut | 9.44e-21 | 10 |
pharynx | 5.63e-19 | 11 |
entire pharyngeal arch endoderm | 5.63e-19 | 11 |
early pharyngeal endoderm | 5.63e-19 | 11 |
pharyngeal arch system | 4.81e-12 | 18 |
upper respiratory tract | 1.81e-11 | 19 |
respiratory system epithelium | 4.06e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 7.15e-08 | 29 |