FFCP PHASE1:Hg19::chr15:78914288..78914292,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_at_chr15:78914288..78914292,- | |||
|id=chr15:78914288..78914292,- | |||
|ontology_enrichment_celltype=CL:0000242!2.74e-20!2;CL:0000312!1.13e-08!5;CL:0000333!1.59e-07!41;CL:0000240!2.30e-07!6;CL:0000311!2.30e-07!6;CL:0000079!2.30e-07!6;CL:0000237!2.30e-07!6;CL:0000036!2.30e-07!6;CL:0000357!2.30e-07!6;CL:0000114!2.30e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.89e-10;2!CL:0000242;1.89e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.89e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.17e-10;2 | |||
|ontology_enrichment_disease=DOID:169!7.75e-15!6;DOID:0050619!1.10e-10!1;DOID:1357!1.10e-10!1;DOID:171!4.03e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:154;3.27e-10;2!DOID:4236;3.27e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,3.58e-10,2;DOID:4236,3.58e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.11e-17!5;UBERON:0002410!1.11e-17!5;UBERON:0004177!5.61e-13!7;UBERON:0002370!7.47e-11!4;UBERON:0005058!7.47e-11!4;UBERON:0009113!7.47e-11!4;UBERON:0003295!7.47e-11!4;UBERON:0005562!7.47e-11!4;UBERON:0001764!1.10e-10!1;UBERON:0001825!1.10e-10!1;UBERON:0000010!4.45e-10!8;UBERON:0000974!2.43e-09!10;UBERON:0003351!1.62e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.89e-37;2!UBERON:0005058;1.89e-37;2!UBERON:0009113;1.89e-37;2!UBERON:0005795;4.69e-19;1!UBERON:0004177;1.21e-15;5!UBERON:0005057;1.21e-15;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.71e-19,4;UBERON:0005058,2.71e-19,4;UBERON:0009113,2.71e-19,4;UBERON:0003295,2.71e-19,4;UBERON:0005562,2.71e-19,4;UBERON:0003351,3.34e-13,6;UBERON:0004177,1.87e-11,7;UBERON:0005057,1.87e-11,7;UBERON:0000974,2.72e-08,10;UBERON:0003408,2.72e-08,10;UBERON:0001042,2.72e-08,10;UBERON:0009145,2.72e-08,10;UBERON:0006562,1.28e-07,11;UBERON:0009722,1.28e-07,11;UBERON:0007690,1.28e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5317047953172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63224820389132,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56262495439963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0.936669811613763,6.81128834470878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,72.8997916430815,0.215649622793364,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0.158013611732727,2.90603563420313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,27.9669979589906,25.5747822898935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62758471326295,0,3.01910690386539,0 | |||
|short_description=p@chr15:78914288..78914292,- | |||
}} |
Revision as of 00:45, 12 January 2014
Short description: | p@chr15:78914288..78914292, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:78914288..78914292, - |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.89e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.71e-19 | 4 |
hemolymphoid system gland | 2.71e-19 | 4 |
thymic region | 2.71e-19 | 4 |
pharyngeal gland | 2.71e-19 | 4 |
thymus primordium | 2.71e-19 | 4 |
pharyngeal epithelium | 3.34e-13 | 6 |
hemopoietic organ | 1.87e-11 | 7 |
immune organ | 1.87e-11 | 7 |
neck | 2.72e-08 | 10 |
gland of gut | 2.72e-08 | 10 |
chordate pharynx | 2.72e-08 | 10 |
pharyngeal region of foregut | 2.72e-08 | 10 |
pharynx | 1.28e-07 | 11 |
entire pharyngeal arch endoderm | 1.28e-07 | 11 |
early pharyngeal endoderm | 1.28e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 3.58e-10 | 2 |
carcinosarcoma | 3.58e-10 | 2 |