FFCP PHASE1:Hg19::chr16:15814873..15814889,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=20bp_to_AF249898_5end | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_1_at_AF249898_5end | |||
|id=chr16:15814873..15814889,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.88e-21;1!UBERON:0009143;3.45e-21;1!UBERON:0004874;3.45e-21;1!UBERON:0007297;2.02e-11;2!UBERON:0006965;3.89e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.68e-35!115;UBERON:0005409!2.35e-11!35;UBERON:0003135!8.30e-11!11;UBERON:0000160!1.02e-09!27;UBERON:0006947!1.07e-07!3;UBERON:0004054!1.07e-07!3;UBERON:0004151!1.80e-07!3;UBERON:0003101!2.44e-07!22;UBERON:0000079!2.44e-07!22;UBERON:0003978!2.99e-07!3;UBERON:0009751!2.99e-07!3;UBERON:0000946!2.99e-07!3;UBERON:0002523!2.99e-07!3;UBERON:0005983!2.99e-07!3;UBERON:0002165!2.99e-07!3;UBERON:0002062!2.99e-07!3;UBERON:0007280!2.99e-07!3;UBERON:0000059!3.23e-07!11;UBERON:0004921!9.03e-07!129;UBERON:0004185!9.03e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.23e-27;3!UBERON:0004054;2.23e-27;3!UBERON:0000998;1.88e-21;1!UBERON:0006868;1.88e-21;1!UBERON:0000989;3.45e-21;1!UBERON:0000996;3.45e-21;1!UBERON:0008811;3.45e-21;1!UBERON:0001000;6.98e-21;1!UBERON:0005352;6.98e-21;1!UBERON:0005904;8.13e-21;4!UBERON:0003135;6.53e-17;11!UBERON:0001255;2.23e-11;2!UBERON:0001556;2.23e-11;2!UBERON:0004175;3.59e-09;21!UBERON:0000058;6.41e-09;10!UBERON:0003101;8.82e-09;22!UBERON:0000079;8.82e-09;22!UBERON:0001043;5.93e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.72e-27,3;UBERON:0004054,2.72e-27,3;UBERON:0000998,1.88e-21,1;UBERON:0006868,1.88e-21,1;UBERON:0000996,2.82e-21,1;UBERON:0000989,3.45e-21,1;UBERON:0008811,3.45e-21,1;UBERON:0006258,3.45e-21,1;UBERON:0005876,3.45e-21,1;UBERON:0004874,3.45e-21,1;UBERON:0001000,9.43e-21,1;UBERON:0005352,9.43e-21,1;UBERON:0005904,9.46e-21,4;UBERON:0003135,7.09e-17,11;UBERON:0007023,1.06e-13,114;UBERON:0003064,8.10e-12,28;UBERON:0001255,2.23e-11,2;UBERON:0001556,2.23e-11,2;UBERON:0003101,9.18e-09,22;UBERON:0000079,9.18e-09,22;UBERON:0004876,3.03e-08,11;UBERON:0001043,6.34e-08,3;UBERON:0009143,6.34e-08,3;UBERON:0004175,8.61e-08,25;UBERON:0003133,5.65e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0,0,0,0,0,0,0,0,3.74844941420348,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23074737923365,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.687481272035051,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0.781514011233092,0,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627944742804112,0,0,0.913158720509496,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,5.92741870267301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,11.2768228006797,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,1.46067277649303,0,0,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.488965776731466,0.406896178315738,2.66302709674205,0,0 | |||
|short_description=p1@AF249898 | |||
}} |
Revision as of 02:31, 12 January 2014
Short description: | p1@AF249898 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AF249898_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 20bp_to_AF249898_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.72e-27 | 3 |
internal male genitalia | 2.72e-27 | 3 |
seminal vesicle | 1.88e-21 | 1 |
seminal fluid secreting gland | 1.88e-21 | 1 |
vagina | 2.82e-21 | 1 |
penis | 3.45e-21 | 1 |
intromittent organ | 3.45e-21 | 1 |
lateral plate mesenchyme | 3.45e-21 | 1 |
undifferentiated genital tubercle | 3.45e-21 | 1 |
somatopleure | 3.45e-21 | 1 |
vas deferens | 9.43e-21 | 1 |
spermatic cord | 9.43e-21 | 1 |
duct of male reproductive system | 9.46e-21 | 4 |
male reproductive organ | 7.09e-17 | 11 |
adult organism | 1.06e-13 | 114 |
intermediate mesoderm | 8.10e-12 | 28 |
urinary bladder | 2.23e-11 | 2 |
lower urinary tract | 2.23e-11 | 2 |
male organism | 9.18e-09 | 22 |
male reproductive system | 9.18e-09 | 22 |
urogenital ridge | 3.03e-08 | 11 |
esophagus | 6.34e-08 | 3 |
esophageal region | 6.34e-08 | 3 |
internal genitalia | 8.61e-08 | 25 |
reproductive organ | 5.65e-07 | 48 |