FFCP PHASE1:Hg19::chr16:15880477..15880494,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr16:15880477..15880494,+ | |||
|id=chr16:15880477..15880494,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.27e-12;1!UBERON:0009143;5.93e-12;1!UBERON:0004874;5.93e-12;1!UBERON:0006242;1.32e-11;1!UBERON:0005754;1.32e-11;1!UBERON:0006603;4.58e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.93e-43!115;UBERON:0006947!5.45e-13!3;UBERON:0004054!5.45e-13!3;UBERON:0005904!7.53e-10!4;UBERON:0000059!2.47e-09!11;UBERON:0003135!4.44e-09!11;UBERON:0002950!9.04e-09!2;UBERON:0001891!9.04e-09!2;UBERON:0009616!9.04e-09!2;UBERON:0003127!1.97e-08!2;UBERON:0000160!4.22e-08!27;UBERON:0002298!1.04e-07!8;UBERON:0001155!1.37e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.27e-15;3!UBERON:0004054;7.27e-15;3!UBERON:0001000;5.93e-12;1!UBERON:0000989;5.93e-12;1!UBERON:0008811;5.93e-12;1!UBERON:0005352;5.93e-12;1!UBERON:0002146;8.19e-12;1!UBERON:0005623;8.19e-12;1!UBERON:0005795;1.32e-11;1!UBERON:0000998;1.32e-11;1!UBERON:0000996;1.32e-11;1!UBERON:0006868;1.32e-11;1!UBERON:0005904;2.19e-11;4!UBERON:0000160;1.10e-09;17!UBERON:0000059;2.21e-09;11!UBERON:0003135;3.73e-09;11!UBERON:0004175;4.14e-08;21!UBERON:0004921;5.85e-08;33!UBERON:0003101;8.29e-08;22!UBERON:0000079;8.29e-08;22!UBERON:0005409;1.29e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.08e-15,3;UBERON:0004054,8.08e-15,3;UBERON:0007023,1.26e-13,114;UBERON:0001000,5.05e-12,1;UBERON:0005352,5.05e-12,1;UBERON:0000989,6.97e-12,1;UBERON:0008811,6.97e-12,1;UBERON:0006258,6.97e-12,1;UBERON:0005876,6.97e-12,1;UBERON:0004874,6.97e-12,1;UBERON:0002146,7.76e-12,1;UBERON:0005623,7.76e-12,1;UBERON:0000996,9.61e-12,1;UBERON:0000998,1.81e-11,1;UBERON:0006868,1.81e-11,1;UBERON:0005904,2.37e-11,4;UBERON:0000160,1.09e-09,17;UBERON:0000059,2.18e-09,11;UBERON:0003064,3.25e-09,28;UBERON:0003135,4.06e-09,11;UBERON:0001046,4.36e-09,19;UBERON:0003101,8.45e-08,22;UBERON:0000079,8.45e-08,22;UBERON:0000162,2.68e-07,14;UBERON:0001353,2.68e-07,14;UBERON:0000163,2.68e-07,14;UBERON:0006866,2.68e-07,14;UBERON:0000164,2.68e-07,14;UBERON:0000931,2.68e-07,14;UBERON:0004122,7.65e-07,15;UBERON:0004175,7.68e-07,25;UBERON:0005409,9.35e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,5.57894367102995,0.828851746593443,0,0,0,0,0,0,0,5.03081368748361,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,1.38510465306835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9384051040206,0.973033209536731,6.72133159426988,0,0,0,0.067401132980677,0,0,0,0,0,3.94584402849391,2.41981432097328,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,3.4916045935831,0,0,0,0,0.0633107959558787,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7499250881402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0.548257766857182,3.47347824872506,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88383422841234,0,0,3.65263488203798,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0.647428837187895,0.307988420568741,0,0,0,0,0,0,0,0,0.463044948647668,1.5299169235277,0,23.289090566621,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0.213233981900981,0,0,0,0,0.25458863311266,0.606351566874658,0,0,0,0.143444410785353,0.332660356546013,0,0,0,0,7.03922827210363,0.366724332548599,1.62758471326295,1.99727032255654,0,0 | |||
|short_description=p@chr16:15880477..15880494,+ | |||
}} |
Revision as of 02:33, 12 January 2014
Short description: | p@chr16:15880477..15880494, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr16:15880477..15880494, + |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 8.08e-15 | 3 |
internal male genitalia | 8.08e-15 | 3 |
adult organism | 1.26e-13 | 114 |
vas deferens | 5.05e-12 | 1 |
spermatic cord | 5.05e-12 | 1 |
penis | 6.97e-12 | 1 |
intromittent organ | 6.97e-12 | 1 |
lateral plate mesenchyme | 6.97e-12 | 1 |
undifferentiated genital tubercle | 6.97e-12 | 1 |
somatopleure | 6.97e-12 | 1 |
pulmonary valve | 7.76e-12 | 1 |
semi-lunar valve | 7.76e-12 | 1 |
vagina | 9.61e-12 | 1 |
seminal vesicle | 1.81e-11 | 1 |
seminal fluid secreting gland | 1.81e-11 | 1 |
duct of male reproductive system | 2.37e-11 | 4 |
intestine | 1.09e-09 | 17 |
large intestine | 2.18e-09 | 11 |
intermediate mesoderm | 3.25e-09 | 28 |
male reproductive organ | 4.06e-09 | 11 |
hindgut | 4.36e-09 | 19 |
male organism | 8.45e-08 | 22 |
male reproductive system | 8.45e-08 | 22 |
cloaca | 2.68e-07 | 14 |
anal region | 2.68e-07 | 14 |
embryonic cloaca | 2.68e-07 | 14 |
terminal part of digestive tract | 2.68e-07 | 14 |
primitive urogenital sinus | 2.68e-07 | 14 |
proctodeum | 2.68e-07 | 14 |
genitourinary system | 7.65e-07 | 15 |
internal genitalia | 7.68e-07 | 25 |
gastrointestinal system | 9.35e-07 | 25 |