FFCP PHASE1:Hg19::chr17:40828008..40828045,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=79990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26105 | |||
|TSSclassifier=strong | |||
|UniProt=F8W7U4 | |||
|association_with_transcript=62bp_to_ENST00000456950,uc002iat.1_5end | |||
|description=CAGE_peak_5_at_PLEKHH3_5end | |||
|id=chr17:40828008..40828045,- | |||
|ontology_enrichment_celltype=CL:0002076!3.27e-19!43;CL:0000223!5.12e-13!59;CL:0000066!1.63e-10!254;CL:0002368!8.75e-10!13;CL:0002251!1.54e-08!21;CL:0002202!4.47e-07!9;CL:0002632!4.47e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000575;4.89e-09;2!CL:0000622;1.05e-07;5!CL:0002537;1.15e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.20e-10,42;CL:0000575,4.72e-09,2;CL:0000223,2.20e-08,58;CL:0002537,9.15e-08,5;CL:0000622,1.07e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!4.61e-15!72;UBERON:0004119!2.56e-14!169;UBERON:0000925!2.56e-14!169;UBERON:0006595!2.56e-14!169;UBERON:0000065!2.81e-12!53;UBERON:0000077!8.34e-12!130;UBERON:0001007!1.74e-11!155;UBERON:0001555!1.74e-11!155;UBERON:0007026!1.74e-11!155;UBERON:0005178!8.12e-11!34;UBERON:0002224!8.12e-11!34;UBERON:0000161!1.55e-10!35;UBERON:0005181!2.66e-10!35;UBERON:0004921!5.71e-10!129;UBERON:0004185!5.71e-10!129;UBERON:0000915!1.34e-09!52;UBERON:0007196!1.70e-09!14;UBERON:0001558!1.70e-09!14;UBERON:0008947!7.64e-09!38;UBERON:0003258!7.64e-09!38;UBERON:0000072!1.64e-08!46;UBERON:0001041!2.34e-08!98;UBERON:0005153!1.32e-07!37;UBERON:0005157!1.37e-07!51;UBERON:0003126!1.48e-07!7;UBERON:0001005!1.48e-07!7;UBERON:0000166!1.75e-07!21;UBERON:0003102!4.10e-07!95;UBERON:0000062!4.35e-07!511;UBERON:0000165!5.37e-07!28;UBERON:0000930!5.37e-07!28;UBERON:0004175!7.18e-07!25;UBERON:0005631!8.89e-07!14;UBERON:0000158!8.89e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.09e-09;10!UBERON:0000158;2.09e-09;10!UBERON:0000305;4.66e-09;7!UBERON:0006562;4.89e-09;2!UBERON:0003126;1.40e-08;7!UBERON:0001005;1.40e-08;7!UBERON:0007196;2.94e-08;15!UBERON:0001558;2.94e-08;15!UBERON:0003975;2.68e-07;18!UBERON:0005178;5.09e-07;34!UBERON:0002224;5.09e-07;34!UBERON:0001041;5.14e-07;14!UBERON:0000161;9.33e-07;19!UBERON:0000166;9.33e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,4.44e-09,7;UBERON:0000161,9.55e-09,36;UBERON:0003126,2.12e-08,7;UBERON:0001005,2.12e-08,7;UBERON:0007196,3.67e-08,15;UBERON:0001558,3.67e-08,15;UBERON:0004871,6.01e-08,8;UBERON:0000166,9.65e-08,22;UBERON:0005178,2.06e-07,34;UBERON:0002224,2.06e-07,34;UBERON:0003102,2.81e-07,99;UBERON:0005181,3.71e-07,35;UBERON:0001004,7.09e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0.697801167972428,1.09220686065086,0.527533956456907,0,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,1.83884244895785,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.327447688744282,2.91436230634034,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.206105058476878,0.257640540045629,0,0.337552664482532,0,0,0,0.161646056818812,0,0,0,1.15956511897978,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0.439001141634502,1.1240175325762,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,2.57545848628462,0,0,0,0,0.16798212819886,0.283550194484773,0,0.290633938513962,0.766765358330422,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0.920771839728375,0.280660094433074,0,0,0,1.48418066444991,0,0,0,0,0,0.362578348774867,0.40101294060657,0.920809889358963,0,0,0.262248829918848,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,2.60024098414608,0,0,0,0,0.137836572484531,0,0,0,0,0.495854746082934,0.192190067365106,0.382838137483752,0.30347334256665,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,1.31178950409327,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0.192444225451024,1.34060455107157,1.08890984861323,0.470719003883896,0.43050537267123,0,2.66058092122005,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0.146508179271894,0,0,0,1.90995587790152,3.56357616999166,2.45728561679386,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0.269605053441981,0.179021174675609,0,1.08507746200627,0,0,0,0,0,0.260427761085233,2.44887999989348,0.724999575434793,0,0.254253650292766,2.12748913591143,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,1.95193241990045,1.46205491157214,0,0.69169171316418,0.179515288819544,0.54323685961004,0.957003479195758,0.457987967009312,1.06606955203727,0,0,0,0,0,0,0.189753732724185,0,0,4.57051862845614,0,0,0,0,0,0,0,0,0,0,0,0,2.34797542718508,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0,4.33899345837827,1.07791637155815,0.522355239482415,0.698906672968121,0,0,0,0.164230914106418,4.75246180793255,0.264768380074501,0.451961481561065,0,0,0.0633107959558787,1.17330829640882,0,0.85381197895741,0,0.288180834308212,0,0.171594997861965,0,0,1.88555227693436,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,2.99518500748487,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0.674921674654501,8.51182150013745,0.0607495566580247,3.68978156359193,0,0.0524545881349981,0.105600336519406,0,0.191915197319445,0,0,0,0.542999601753713,1.72844298240254,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0.314408610199332,0.414239055347196,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,1.39879507719444,0.622077260032973,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0.196295437002051,0,1.46742878817343,0.115525666150338,0,0,0,0.300841313397029,0,0,0.261906694481422,0,0.147856086217045,0.135075169236789,0,0,0,0,0,1.48863353516788,0,2.55524855279191,0,0.336283722218824,0,0.455324382702595,0.177404740325278,0,0,0.135939465953663,0.0657727735628491,0,0.111231401892069,1.0989032999072,0,0.840816489941367,0,0,0,0.142953088353313,0,0,0,0,0.207216164163037,1.19502933965765,4.14755797088455,2.15113679410139,0,0,0.423387050190929,6.18588545068935,0,0,1.00669888618013,0,0.121917924982269,0,0.205325613712494,0,1.94284397223656,0,0.198950775161368,0,0,0.109940516745429,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0,0,0.357107877211315,0,0.160482733378337,0,0.458729283404541,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,2.55880778281177,0.476128862927481,0.0645889098360061,0.248298857183432,0,0.0636471582781649,0,2.8303177226605,0.342233301085281,2.69408212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| |||
|short_description=p5@PLEKHH3 | |||
}} |
Revision as of 15:29, 20 January 2014
Short description: | p5@PLEKHH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PLEKHH3_5end |
Coexpression cluster: | NA |
Association with transcript: | 62bp_to_ENST00000456950, uc002iat.1_5end |
EntrezGene: | PLEKHH3 |
HGNC: | 26105 |
UniProt: | F8W7U4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.20e-10 | 42 |
corneal epithelial cell | 4.72e-09 | 2 |
endodermal cell | 2.20e-08 | 58 |
amnion mesenchymal stem cell | 9.15e-08 | 5 |
acinar cell | 1.07e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
amnion | 4.44e-09 | 7 |
orifice | 9.55e-09 | 36 |
trachea | 2.12e-08 | 7 |
respiratory airway | 2.12e-08 | 7 |
tracheobronchial tree | 3.67e-08 | 15 |
lower respiratory tract | 3.67e-08 | 15 |
somatic layer of lateral plate mesoderm | 6.01e-08 | 8 |
oral opening | 9.65e-08 | 22 |
thoracic cavity element | 2.06e-07 | 34 |
thoracic cavity | 2.06e-07 | 34 |
surface structure | 2.81e-07 | 99 |
thoracic segment organ | 3.71e-07 | 35 |
respiratory system | 7.09e-07 | 74 |