FFCP PHASE1:Hg19::chr17:67137987..67138000,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23460 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=36 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N139 | |||
|association_with_transcript=14bp_to_ENST00000284425,NM_080284,uc002jhw.1,uc002jhy.2_5end | |||
|coexpression_cluster_id=C2432 | |||
|description=CAGE_peak_3_at_ABCA6_5end | |||
|id=chr17:67137987..67138000,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.24e-38!115;UBERON:0000477!1.13e-13!286;UBERON:0000475!2.78e-13!365;UBERON:0004111!5.17e-13!241;UBERON:0000025!7.95e-12!194;UBERON:0001049!3.86e-11!57;UBERON:0005068!3.86e-11!57;UBERON:0006241!3.86e-11!57;UBERON:0007135!3.86e-11!57;UBERON:0002616!2.61e-10!59;UBERON:0000483!3.29e-10!309;UBERON:0000481!5.10e-10!347;UBERON:0000468!7.18e-10!659;UBERON:0000119!7.89e-10!312;UBERON:0003075!3.20e-09!86;UBERON:0007284!3.20e-09!86;UBERON:0002346!1.00e-08!90;UBERON:0000153!1.22e-08!129;UBERON:0007811!1.22e-08!129;UBERON:0007100!2.27e-08!27;UBERON:0002298!2.43e-08!8;UBERON:0000467!3.67e-08!625;UBERON:0000480!4.53e-08!626;UBERON:0002308!5.45e-08!9;UBERON:0000125!5.45e-08!9;UBERON:0000955!8.41e-08!69;UBERON:0006238!8.41e-08!69;UBERON:0003080!1.17e-07!42;UBERON:0000922!1.18e-07!612;UBERON:0000033!1.19e-07!123;UBERON:0002050!1.89e-07!605;UBERON:0005423!1.89e-07!605;UBERON:0000062!2.23e-07!511;UBERON:0000923!3.81e-07!604;UBERON:0005291!3.81e-07!604;UBERON:0006598!3.81e-07!604;UBERON:0002532!3.81e-07!604;UBERON:0002780!5.12e-07!41;UBERON:0001890!5.12e-07!41;UBERON:0006240!5.12e-07!41;UBERON:0001017!6.77e-07!82;UBERON:0004121!7.18e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.65e-09;25!UBERON:0003978;9.73e-08;3!UBERON:0000946;9.73e-08;3!UBERON:0004151;1.44e-07;3!UBERON:0007023;3.02e-07;114!UBERON:0000948;4.88e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.36e-30,114;UBERON:0007100,1.81e-11,27;UBERON:0004797,6.35e-11,7;UBERON:0000948,2.01e-09,24;UBERON:0005498,2.01e-09,24;UBERON:0004140,2.01e-09,24;UBERON:0009881,2.01e-09,24;UBERON:0004141,2.01e-09,24;UBERON:0003084,2.01e-09,24;UBERON:0007005,2.01e-09,24;UBERON:0004139,2.01e-09,24;UBERON:0004291,2.01e-09,24;UBERON:0003103,2.33e-08,68;UBERON:0004111,3.91e-08,240;UBERON:0003978,5.85e-08,3;UBERON:0009751,5.85e-08,3;UBERON:0000946,5.85e-08,3;UBERON:0002523,5.85e-08,3;UBERON:0005983,5.85e-08,3;UBERON:0002165,5.85e-08,3;UBERON:0002062,5.85e-08,3;UBERON:0007280,5.85e-08,3;UBERON:0004151,1.01e-07,3;UBERON:0000025,1.97e-07,192;UBERON:0004145,2.70e-07,3 | |||
|phase1_expression=2.54349730978779,0.214100523890983,3.24195129420734,0,0,0,2.53299878168311,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,2.68280343881454,0.383587685530591,0,0,0.144846518960824,0,0,0,0,0,0.72038491523742,0,0,0,0,1.19662164466979,0,0,0,1.19257444420023,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,2.05389375053383,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0.496971951695318,1.39293562831038,1.85372853138506,0,1.06400514659507,0,0,0,6.53543174339509,0.404132016209064,0.326923806226917,0,2.30470369792,0,0.312160076830321,0,0.597794722207204,0,0,0,1.63323337003915,0.122834317311768,2.06651562351531,0,0.494533858557114,0,0,0.336672227908132,0.375355559615893,0.277064115484183,0,0.30648779579902,0.300476117813194,2.04177929688038,0,0,0.635795703478686,0,0,0,0.18611685633159,0.168776332241266,0,0,0.460249493211497,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1404027857465,4.91413608338813,10.6342183202653,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,1.57275793023962,0,0,0,0.355391948742546,0,1.50719688529793,0.871533458600294,0.899756920638513,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0.300946099727719,0,1.03473071292505,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0.561320188866147,1.66580894032411,1.02341449813341,0.321707842287215,0,0,0.355123450626254,0.246381468041427,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8193062230108,0,0,0,0,1.6068392984416,0,0,0,0,0.537101224341368,0.290033387828457,0.255679882248303,0.0890320356467374,0,0,0,0,0,0,0,0.616067160352178,0.532306030317022,0.869932992075073,0,0,0,0,2.47819252100972,0,1.28381696410176,1.27281299170375,0,0.179872457583315,0.274537029736055,0.353437207037059,0.202182481573316,0,0,0.48763373908959,0.974853958525138,0,0,0.424216295861138,1.13008116620243,0.551365343546124,0,0,0.578775534266688,0,0,0,0,0,0,0.35667105148125,0,1.26664581178598,0,0,0.349934720244983,0,0,0,9.69681148000825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.59286806723523,0,0,0,0,0,0,0,0.422008249231538,0.556543525114529,0,0,0.796991953004279,0,0,0,0,0,0,0,0,3.45251919729268,0,0,0,1.20598527610407,0,0,0,5.07499702804355,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.221158519862449,0.295547618953547,0,0,0,2.84715956464049,0.227884111694002,0,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94606641907346,0.611030144933625,0,0,0,0.876214728748802,0.802577647298789,0.234264445725339,0,0,0.728341138602278,1.57833761139756,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,3.29762656060626,0,1.80784592624426,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,4.10716136675979,0,0,0,3.90995361781156,1.83328339209347,7.17873024576814,0.599037001496973,1.71690419254628,2.4548860318606,3.15762320687613,0.360299883542404,0,0,0,0,0.196854963029498,0,0,0.544813624446302,0,0,0,0,0,0.303747783290123,0,0.551639951094387,0.314727528809989,0,0,0,2.1440859791201,1.98627591109629,0,0,0,0,0,0,0,0,6.15519381447946,1.32506888912221,2.19781025814636,3.43804764530994,0,0,3.20362237703084,0,2.07119527673598,1.48849806543585,0,0,0,0.544017803369474,1.5041393641362,2.45076461410769,2.62298104567844,0,0,0.366078794705889,0.876336514945499,2.29363678276028,5.76831067991632,0.496771223531068,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0.414706207840855,0.265841714557995,0.521745061811734,0.150257608997218,0,0,0,0,0.928067519756987,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0.303859956177382,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.256916900385838,0,1.59633859057151,0,0,0,0,2.85538840518309,0,0,0,0,0,0,0,3.45967510406583,0,0.781514011233092,0,0,0,0.0675375846183947,0.781078098613847,0.206686796501184,0.19024743058172,0,0.548257766857182,1.48863353516788,0,0,0,2.69026977775059,0.606965604236632,1.36597314810779,0.0887023701626388,0,0.514464028312255,0.271878931907327,0.0657727735628491,0,0,1.49136876415977,0.785577949580009,0,0.913158720509496,0,0,0.500335809236594,0,0,0,0.801711364730253,0.207216164163037,0.17071847709395,0,0,0.354996002191696,0.0852134047591577,0,0,0,0,0,0,1.34109717480496,0.647428837187895,2.77189578511867,0,1.45713297917742,0,0,0,0,0,0,1.15761237161917,0,0,4.16752146981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| |||
|short_description=p3@ABCA6 | |||
}} |
Revision as of 17:02, 20 January 2014
Short description: | p3@ABCA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ABCA6_5end |
Coexpression cluster: | C2432_Cardiac_Hepatocyte_Fibroblast_lung_heart_adipose_liver |
Association with transcript: | 14bp_to_ENST00000284425, NM_080284, uc002jhw.1, uc002jhy.2_5end |
EntrezGene: | ABCA6 |
HGNC: | 36 |
UniProt: | Q8N139 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 9.36e-30 | 114 |
primary circulatory organ | 1.81e-11 | 27 |
blood vessel layer | 6.35e-11 | 7 |
heart | 2.01e-09 | 24 |
primitive heart tube | 2.01e-09 | 24 |
primary heart field | 2.01e-09 | 24 |
anterior lateral plate mesoderm | 2.01e-09 | 24 |
heart tube | 2.01e-09 | 24 |
heart primordium | 2.01e-09 | 24 |
cardiac mesoderm | 2.01e-09 | 24 |
cardiogenic plate | 2.01e-09 | 24 |
heart rudiment | 2.01e-09 | 24 |
compound organ | 2.33e-08 | 68 |
anatomical conduit | 3.91e-08 | 240 |
valve | 5.85e-08 | 3 |
cardiac mesenchyme | 5.85e-08 | 3 |
cardial valve | 5.85e-08 | 3 |
tunica intima | 5.85e-08 | 3 |
heart layer | 5.85e-08 | 3 |
endocardium | 5.85e-08 | 3 |
endocardial cushion | 5.85e-08 | 3 |
presumptive endocardium | 5.85e-08 | 3 |
cardiac chamber | 1.01e-07 | 3 |
tube | 1.97e-07 | 192 |
outflow tract | 2.70e-07 | 3 |