FFCP PHASE1:Hg19::chr17:73720330..73720338,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3691 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6158 | |||
|TSSclassifier=weak | |||
|UniProt=P16144 | |||
|association_with_transcript=-435bp_to_uc002jpj.2,uc010dgp.1_5end | |||
|description=CAGE_peak_22_at_ITGB4_5end | |||
|id=chr17:73720330..73720338,+ | |||
|ontology_enrichment_celltype=CL:0002621!4.68e-19!3;CL:0002076!1.20e-14!43;CL:0002251!5.03e-13!21;CL:0000223!3.20e-12!59;CL:0000066!1.20e-07!254;CL:0000342!3.85e-07!1;CL:0002565!3.85e-07!1;CL:0000244!4.90e-07!4;CL:0000731!4.90e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002621;4.89e-53;3!CL:0002231;1.83e-14;3!CL:0000083;2.66e-11;4!CL:0002076;1.04e-09;42!CL:0002251;6.42e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,6.39e-53,3;CL:0002231,1.60e-14,3;CL:0000223,1.39e-11,58;CL:0000083,2.80e-11,4;CL:0002076,2.90e-09,42;CL:0002251,6.69e-09,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;3.44e-21;2!DOID:1793;2.66e-11;4!DOID:170;5.73e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,3.81e-21,2;DOID:1793,2.80e-11,4;DOID:170,5.92e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001949!4.68e-19!3;UBERON:0001264!2.11e-15!10;UBERON:0003922!2.11e-15!10;UBERON:0003923!2.11e-15!10;UBERON:0003924!2.11e-15!10;UBERON:0003921!2.11e-15!10;UBERON:0001045!5.57e-14!11;UBERON:0000166!6.41e-13!21;UBERON:0001444!1.12e-12!48;UBERON:0002114!8.60e-12!12;UBERON:0002108!3.48e-10!14;UBERON:0004119!7.57e-10!169;UBERON:0000925!7.57e-10!169;UBERON:0006595!7.57e-10!169;UBERON:0000161!1.06e-09!35;UBERON:0005910!1.59e-09!6;UBERON:0000165!1.79e-09!28;UBERON:0000930!1.79e-09!28;UBERON:0002075!1.93e-08!18;UBERON:0001828!1.92e-07!8;UBERON:0000033!2.20e-07!123;UBERON:0004121!3.18e-07!169;UBERON:0002506!3.85e-07!1;UBERON:0001769!3.85e-07!1;UBERON:0002038!4.08e-07!1;UBERON:0009661!4.08e-07!1;UBERON:0000924!5.58e-07!173;UBERON:0006601!5.58e-07!173;UBERON:0000153!6.48e-07!129;UBERON:0007811!6.48e-07!129;UBERON:0002372!6.57e-07!1;UBERON:0001961!6.57e-07!1;UBERON:0001744!6.57e-07!1;UBERON:0001735!6.57e-07!1;UBERON:0002581!6.97e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.89e-53;3!UBERON:0003929;1.80e-23;7!UBERON:0003350;1.10e-20;8!UBERON:0001828;1.10e-20;8!UBERON:0001264;5.90e-17;10!UBERON:0000486;3.59e-14;12!UBERON:0003729;3.64e-13;13!UBERON:0002075;6.79e-10;18!UBERON:0000161;2.46e-09;19!UBERON:0000166;2.46e-09;19!UBERON:0000344;6.42e-09;20!UBERON:0004807;3.39e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.39e-53,3;UBERON:0003350,1.21e-20,8;UBERON:0001828,1.21e-20,8;UBERON:0001264,5.90e-17,10;UBERON:0003729,3.87e-13,13;UBERON:0000161,1.12e-10,36;UBERON:0002075,6.79e-10,18;UBERON:0000344,6.69e-09,20;UBERON:0000166,3.51e-08,22;UBERON:0003929,2.27e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,1.09098448236334,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80455823272956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0.627865836814451,2.38944859545918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895444205407437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,2.24563005266467,0,0,0,0,0,0 | |||
|short_description=p22@ITGB4 | |||
}} |
Revision as of 17:21, 20 January 2014
Short description: | p22@ITGB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_ITGB4_5end |
Coexpression cluster: | NA |
Association with transcript: | -435bp_to_uc002jpj.2, uc010dgp.1_5end |
EntrezGene: | ITGB4 |
HGNC: | 6158 |
UniProt: | P16144 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 6.39e-53 | 3 |
epithelial cell of prostate | 1.60e-14 | 3 |
endodermal cell | 1.39e-11 | 58 |
epithelial cell of pancreas | 2.80e-11 | 4 |
endo-epithelial cell | 2.90e-09 | 42 |
epithelial cell of alimentary canal | 6.69e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 6.39e-53 | 3 |
epithelium of mucosa | 1.21e-20 | 8 |
gingiva | 1.21e-20 | 8 |
pancreas | 5.90e-17 | 10 |
mouth mucosa | 3.87e-13 | 13 |
orifice | 1.12e-10 | 36 |
viscus | 6.79e-10 | 18 |
mucosa | 6.69e-09 | 20 |
oral opening | 3.51e-08 | 22 |
gut epithelium | 2.27e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 3.81e-21 | 2 |
pancreatic cancer | 2.80e-11 | 4 |
endocrine gland cancer | 5.92e-08 | 6 |