FFCP PHASE1:Hg19::chr17:80376216..80376245,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284004 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26307 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WVB3 | |||
|association_with_transcript=-6bp_to_ENST00000337014,NM_173620,uc002kev.3,uc010diq.2_5end | |||
|description=CAGE_peak_1_at_HEXDC_5end | |||
|id=chr17:80376216..80376245,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.53e-11!53;CL:0000051!3.53e-11!53;CL:0000838!4.97e-11!52;CL:0000791!2.21e-09!18;CL:0000789!2.21e-09!18;CL:0002420!2.21e-09!18;CL:0002419!2.21e-09!18;CL:0000790!2.21e-09!18;CL:0000084!1.06e-08!25;CL:0000827!1.06e-08!25;CL:0000236!2.71e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.29e-09;18!CL:0000789;2.29e-09;18!CL:0002419;2.29e-09;18!CL:0000084;1.02e-08;25!CL:0000236;4.30e-08;13!CL:0000542;5.48e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.53e-11,53;CL:0000051,3.53e-11,53;CL:0000838,4.97e-11,52;CL:0000791,2.21e-09,18;CL:0000789,2.21e-09,18;CL:0002420,2.21e-09,18;CL:0002419,2.21e-09,18;CL:0000790,2.21e-09,18;CL:0000084,1.06e-08,25;CL:0000827,1.06e-08,25;CL:0000236,2.71e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;2.29e-09;18!CL:0000051;5.48e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.99e-13!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.05e-13,114 | |||
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| |||
|short_description=p1@HEXDC | |||
}} |
Revision as of 18:10, 20 January 2014
Short description: | p1@HEXDC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HEXDC_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000337014, NM_173620, uc002kev.3, uc010diq.2_5end |
EntrezGene: | HEXDC |
HGNC: | 26307 |
UniProt: | Q8WVB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.53e-11 | 53 |
common lymphoid progenitor | 3.53e-11 | 53 |
lymphoid lineage restricted progenitor cell | 4.97e-11 | 52 |
mature alpha-beta T cell | 2.21e-09 | 18 |
alpha-beta T cell | 2.21e-09 | 18 |
immature T cell | 2.21e-09 | 18 |
mature T cell | 2.21e-09 | 18 |
immature alpha-beta T cell | 2.21e-09 | 18 |
T cell | 1.06e-08 | 25 |
pro-T cell | 1.06e-08 | 25 |
B cell | 2.71e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.05e-13 | 114 |