FFCP PHASE1:Hg19::chr19:1863591..1863611,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83855 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16857 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BXK1 | |||
|association_with_transcript=-27bp_to_ENST00000250916,NM_031918,uc002luc.2,uc010xgt.1_5end | |||
|description=CAGE_peak_2_at_KLF16_5end | |||
|id=chr19:1863591..1863611,- | |||
|ontology_enrichment_celltype=CL:0002321!4.20e-23!248;CL:0000220!9.25e-23!246;CL:0000144!6.22e-18!625;CL:0000548!4.41e-17!679;CL:0000004!4.41e-17!679;CL:0000255!4.41e-17!679;CL:0000012!6.57e-17!682;CL:0002371!4.04e-16!591;CL:0000222!9.11e-16!119;CL:0002078!1.36e-14!44;CL:0000115!1.58e-14!35;CL:0000066!3.66e-12!254;CL:0000003!1.64e-11!722;CL:0002139!1.38e-10!24;CL:0000213!4.99e-10!57;CL:0000215!4.99e-10!57;CL:0000071!3.62e-09!18;CL:0002546!3.62e-09!18;CL:0000055!1.28e-08!180;CL:0000359!2.09e-08!32;CL:0000221!3.68e-08!71;CL:0000183!7.89e-08!59;CL:0000192!1.31e-07!42;CL:0000514!1.31e-07!42;CL:1000449!2.03e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000115;7.85e-13;36!CL:0002139;9.99e-11;24!CL:0002078;1.64e-10;45!CL:0000071;3.22e-09;18!CL:1000449;2.67e-08;15!CL:0000359;3.93e-08;32!CL:1000497;8.62e-07;17!CL:0002518;8.62e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.44e-23,250;CL:0000222,8.98e-16,121;CL:0002078,4.59e-15,45;CL:0000115,5.19e-15,36;CL:0000066,2.22e-12,253;CL:0002139,1.38e-10,24;CL:0000213,1.98e-10,58;CL:0000215,1.98e-10,58;CL:0000071,3.62e-09,18;CL:0002546,3.62e-09,18;CL:0000359,2.09e-08,32;CL:1000449,2.51e-08,15;CL:0000221,2.65e-08,72;CL:0000192,3.53e-07,43;CL:0000514,3.53e-07,43;CL:1000497,8.18e-07,17;CL:0002518,8.18e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;3.22e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!2.91e-14!69;UBERON:0002049!1.12e-12!79;UBERON:0007798!1.12e-12!79;UBERON:0001981!8.51e-12!60;UBERON:0007500!8.51e-12!60;UBERON:0004537!8.51e-12!60;UBERON:0006965!8.51e-12!60;UBERON:0001637!9.20e-12!42;UBERON:0003509!9.20e-12!42;UBERON:0004572!9.20e-12!42;UBERON:0004535!1.38e-11!110;UBERON:0003914!5.28e-11!118;UBERON:0004872!6.63e-11!84;UBERON:0001009!3.91e-10!113;UBERON:0000487!3.25e-09!22;UBERON:0001986!3.62e-09!18;UBERON:0004638!3.62e-09!18;UBERON:0004852!3.62e-09!18;UBERON:0006914!7.04e-09!25;UBERON:0004573!1.67e-08!33;UBERON:0004571!1.67e-08!33;UBERON:0000486!1.76e-07!82;UBERON:0004211!2.03e-07!16;UBERON:0001285!2.03e-07!16;UBERON:0007684!2.03e-07!16;UBERON:0003220!2.03e-07!16;UBERON:0004208!2.03e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;5.11e-10;74!UBERON:0000487;2.80e-09;22!UBERON:0004638;3.22e-09;18!UBERON:0001986;3.22e-09;18!UBERON:0004852;3.22e-09;18!UBERON:0006914;4.98e-09;25!UBERON:0007500;8.30e-09;56!UBERON:0001981;8.30e-09;56!UBERON:0004537;8.30e-09;56!UBERON:0001637;1.81e-08;42!UBERON:0003509;1.81e-08;42!UBERON:0004572;1.81e-08;42!UBERON:0000055;2.33e-08;65!UBERON:0006555;2.67e-08;15!UBERON:0004819;2.67e-08;15!UBERON:0001285;2.67e-08;15!UBERON:0007684;2.67e-08;15!UBERON:0004573;6.74e-08;33!UBERON:0004571;6.74e-08;33!UBERON:0000353;8.41e-08;15!UBERON:0000490;5.92e-07;33!UBERON:0002049;7.21e-07;75!UBERON:0007798;7.21e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.86e-15,68;UBERON:0002049,2.45e-13,78;UBERON:0007798,2.45e-13,78;UBERON:0007500,1.53e-12,59;UBERON:0001981,1.53e-12,59;UBERON:0004537,1.53e-12,59;UBERON:0006965,1.53e-12,59;UBERON:0004535,4.23e-12,109;UBERON:0001637,9.20e-12,42;UBERON:0003509,9.20e-12,42;UBERON:0004572,9.20e-12,42;UBERON:0004872,1.75e-11,83;UBERON:0003914,2.58e-11,117;UBERON:0001009,1.34e-10,112;UBERON:0000487,3.25e-09,22;UBERON:0004638,3.62e-09,18;UBERON:0001986,3.62e-09,18;UBERON:0004852,3.62e-09,18;UBERON:0006914,7.04e-09,25;UBERON:0004573,1.67e-08,33;UBERON:0004571,1.67e-08,33;UBERON:0004211,2.51e-08,15;UBERON:0009773,2.51e-08,15;UBERON:0001231,2.51e-08,15;UBERON:0001285,2.51e-08,15;UBERON:0007684,2.51e-08,15;UBERON:0004208,2.51e-08,15;UBERON:0000353,9.03e-08,15;UBERON:0007503,1.81e-07,78;UBERON:0000486,3.39e-07,83;UBERON:0006555,5.08e-07,16;UBERON:0004819,5.08e-07,16 | |||
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 | |||
|short_description=p2@KLF16 | |||
}} |
Revision as of 20:19, 20 January 2014
Short description: | p2@KLF16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KLF16_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENST00000250916, NM_031918, uc002luc.2, uc010xgt.1_5end |
EntrezGene: | KLF16 |
HGNC: | 16857 |
UniProt: | Q9BXK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.44e-23 | 250 |
mesodermal cell | 8.98e-16 | 121 |
meso-epithelial cell | 4.59e-15 | 45 |
endothelial cell | 5.19e-15 | 36 |
epithelial cell | 2.22e-12 | 253 |
endothelial cell of vascular tree | 1.38e-10 | 24 |
lining cell | 1.98e-10 | 58 |
barrier cell | 1.98e-10 | 58 |
blood vessel endothelial cell | 3.62e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.62e-09 | 18 |
vascular associated smooth muscle cell | 2.09e-08 | 32 |
epithelial cell of nephron | 2.51e-08 | 15 |
ectodermal cell | 2.65e-08 | 72 |
smooth muscle cell | 3.53e-07 | 43 |
smooth muscle myoblast | 3.53e-07 | 43 |
kidney cell | 8.18e-07 | 17 |
kidney epithelial cell | 8.18e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
vessel | 4.86e-15 | 68 |
vasculature | 2.45e-13 | 78 |
vascular system | 2.45e-13 | 78 |
epithelial tube open at both ends | 1.53e-12 | 59 |
blood vessel | 1.53e-12 | 59 |
blood vasculature | 1.53e-12 | 59 |
vascular cord | 1.53e-12 | 59 |
cardiovascular system | 4.23e-12 | 109 |
artery | 9.20e-12 | 42 |
arterial blood vessel | 9.20e-12 | 42 |
arterial system | 9.20e-12 | 42 |
splanchnic layer of lateral plate mesoderm | 1.75e-11 | 83 |
epithelial tube | 2.58e-11 | 117 |
circulatory system | 1.34e-10 | 112 |
simple squamous epithelium | 3.25e-09 | 22 |
blood vessel endothelium | 3.62e-09 | 18 |
endothelium | 3.62e-09 | 18 |
cardiovascular system endothelium | 3.62e-09 | 18 |
squamous epithelium | 7.04e-09 | 25 |
systemic artery | 1.67e-08 | 33 |
systemic arterial system | 1.67e-08 | 33 |
nephron epithelium | 2.51e-08 | 15 |
renal tubule | 2.51e-08 | 15 |
nephron tubule | 2.51e-08 | 15 |
nephron | 2.51e-08 | 15 |
uriniferous tubule | 2.51e-08 | 15 |
nephrogenic mesenchyme | 2.51e-08 | 15 |
parenchyma | 9.03e-08 | 15 |
epithelial vesicle | 1.81e-07 | 78 |
multilaminar epithelium | 3.39e-07 | 83 |
excretory tube | 5.08e-07 | 16 |
kidney epithelium | 5.08e-07 | 16 |