FFCP PHASE1:Hg19::chr19:13388036..13388041,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:13388036..13388041,- | |||
|id=chr19:13388036..13388041,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000054;3.18e-11;2!CL:0000137;3.18e-11;2!CL:0000092;3.18e-11;2!CL:0000346;6.56e-08;3!CL:1000428;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,3.02e-11,2;CL:0000137,3.02e-11,2;CL:0000092,3.02e-11,2;CL:0000346,5.54e-08,3;CL:1000428,5.54e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006238;3.19e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;4.66e-21;1!DOID:3165;4.66e-21;1!DOID:0060121;4.66e-21;1!DOID:2438;4.66e-21;1!DOID:4418;4.66e-21;1!DOID:200;3.18e-11;2!DOID:4305;3.18e-11;2!DOID:3093;1.31e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,4.22e-21,1;DOID:3165,4.22e-21,1;DOID:0060121,4.22e-21,1;DOID:2438,4.22e-21,1;DOID:4418,4.22e-21,1;DOID:200,3.02e-11,2;DOID:4305,3.02e-11,2;DOID:3093,1.33e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001950!2.60e-16!20;UBERON:0000955!2.18e-15!69;UBERON:0006238!2.18e-15!69;UBERON:0002619!1.22e-14!22;UBERON:0001017!1.84e-14!82;UBERON:0001893!1.13e-13!34;UBERON:0005743!1.71e-13!86;UBERON:0001869!8.67e-13!32;UBERON:0000956!1.29e-12!25;UBERON:0000203!1.29e-12!25;UBERON:0002616!1.81e-12!59;UBERON:0002791!3.20e-12!33;UBERON:0002020!8.94e-12!34;UBERON:0003528!8.94e-12!34;UBERON:0000073!1.27e-11!94;UBERON:0001016!1.27e-11!94;UBERON:0002780!8.91e-11!41;UBERON:0001890!8.91e-11!41;UBERON:0006240!8.91e-11!41;UBERON:0003080!1.93e-10!42;UBERON:0001049!5.17e-09!57;UBERON:0005068!5.17e-09!57;UBERON:0006241!5.17e-09!57;UBERON:0007135!5.17e-09!57;UBERON:0000033!1.55e-08!123;UBERON:0000153!7.48e-08!129;UBERON:0007811!7.48e-08!129;UBERON:0000200!2.32e-07!6;UBERON:0007023!7.64e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;6.56e-08;3!UBERON:0001992;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,5.54e-08,3;UBERON:0001992,5.54e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78256731016278,0,0,0,1.40900451698243,0.780356085359269,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11838053946208,0.500547425135725,0,0.278406173895242,0,0.270455678475983,0,0,0,0,0,4.01196183398922,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0.537063524026827,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.971121518136371,0,1.20990716048664,0,0.063186579628488,0,0,0,0.661983911750998,0.627865836814451,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0.411125773940253,1.39100228192093,0.443175571691151,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,1.22313785466253,2.510468311496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.41023272848151,0,0.345786262321089,0.161475645631851,0,1.17777262201231,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.270150338473579,0.781078098613847,0,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0.460409414939944,0,0.444925607568277,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0.299823467774787,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p@chr19:13388036..13388041,- | |||
}} |
Revision as of 21:40, 20 January 2014
Short description: | p@chr19:13388036..13388041, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:13388036..13388041, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 3.02e-11 | 2 |
osteocyte | 3.02e-11 | 2 |
osteoclast | 3.02e-11 | 2 |
hair follicle dermal papilla cell | 5.54e-08 | 3 |
stem cell of epidermis | 5.54e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 5.54e-08 | 3 |
papillary layer of dermis | 5.54e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 4.22e-21 | 1 |
skin benign neoplasm | 4.22e-21 | 1 |
integumentary system benign neoplasm | 4.22e-21 | 1 |
dermis tumor | 4.22e-21 | 1 |
cutaneous fibrous histiocytoma | 4.22e-21 | 1 |
giant cell tumor | 3.02e-11 | 2 |
bone giant cell tumor | 3.02e-11 | 2 |
nervous system cancer | 1.33e-07 | 11 |