FFCP PHASE1:Hg19::chr19:45417959..45417970,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=341 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=607 | |||
|TSSclassifier=strong | |||
|UniProt=P02654,B2R526 | |||
|association_with_transcript=38bp_to_ENST00000252491,NM_001645,uc002pae.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_APOC1_5end | |||
|id=chr19:45417959..45417970,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.42e-11!7;CL:0000586!1.42e-11!7;CL:0000181!2.30e-09!12;CL:0000417!2.30e-09!12;CL:0000668!2.30e-09!12;CL:0000414!2.30e-09!12;CL:0000412!2.30e-09!12;CL:0000182!2.30e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.98e-25;6!CL:0000182;2.27e-22;12!CL:0002231;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.33e-25,6;CL:0000182,2.15e-22,12;CL:0000223,3.72e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.22e-14;11!UBERON:0009497;4.96e-12;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!1.11e-10!26;UBERON:0002298!2.78e-09!8;UBERON:0002107!4.26e-09!19;UBERON:0006925!4.26e-09!19;UBERON:0008836!4.26e-09!19;UBERON:0008835!1.39e-07!22;UBERON:0003894!1.39e-07!22;UBERON:0001896!3.59e-07!3;UBERON:0005290!3.59e-07!3;UBERON:0010096!3.59e-07!3;UBERON:0009854!3.61e-07!23;UBERON:0006331!4.09e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.83e-31;19!UBERON:0006925;4.83e-31;19!UBERON:0002423;1.38e-23;25!UBERON:0002365;6.55e-18;31!UBERON:0002330;6.55e-18;31!UBERON:0002368;7.17e-17;33!UBERON:0000949;1.82e-11;43!UBERON:0002530;1.83e-08;57!UBERON:0005172;6.94e-08;52!UBERON:0005173;6.94e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.96e-31,19;UBERON:0006925,4.96e-31,19;UBERON:0008836,4.96e-31,19;UBERON:0008835,8.47e-27,22;UBERON:0003894,8.47e-27,22;UBERON:0009854,1.24e-25,23;UBERON:0007499,1.40e-23,25;UBERON:0009497,1.40e-23,25;UBERON:0000015,1.40e-23,25;UBERON:0002423,1.40e-23,25;UBERON:0006235,1.40e-23,25;UBERON:0004161,1.40e-23,25;UBERON:0009856,1.14e-22,26;UBERON:0002365,5.29e-19,31;UBERON:0002330,5.29e-19,31;UBERON:0002368,8.07e-17,35;UBERON:0003929,1.40e-14,54;UBERON:0002530,2.59e-13,59;UBERON:0000949,4.74e-13,45;UBERON:0005172,7.60e-11,54;UBERON:0005173,7.60e-11,54;UBERON:0002417,9.69e-10,60;UBERON:0000916,9.69e-10,60;UBERON:0005911,1.82e-09,82 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671746422719773,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,3.9313088667105,1.18157981336281,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,1.40402559083543,1.78357394746474,0.93733833986777,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,3.29731237272711,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.322260734604821,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10674542563371,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.448788222048861,0.217294743844016,0,0,0,0,0,0.332423363800313,0,0,0.167821586975843,0.37950746544837,0.317873157960757,0,0,0.141353071433941,0,0,0,0,0,0,0,0.202203398942031,0,0.468528891450678,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.857974989309823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945398187686684,1.31865373409866,0.674035438541849,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0.113312091520126,1.02586563574658,2.65013777824443,0.129282956361551,0.13223260174269,0.171086837884329,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.221858103073705,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398594520940089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0.785233868459781,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0.126166424835079,0,0,0.407955318967927,0,0.36757959813938,0.250707539292375,0,0,0,0.103432995861895,0.213233981900981,0,0,0.186224142887574,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p6@APOC1 | |||
}} |
Revision as of 23:49, 20 January 2014
Short description: | p6@APOC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_APOC1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 38bp_to_ENST00000252491, NM_001645, uc002pae.1_5end |
EntrezGene: | APOC1 |
HGNC: | 607 |
UniProt: | P02654B2R526 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.33e-25 | 6 |
hepatocyte | 2.15e-22 | 12 |
endodermal cell | 3.72e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 4.96e-31 | 19 |
digestive gland | 4.96e-31 | 19 |
liver bud | 4.96e-31 | 19 |
hepatic diverticulum | 8.47e-27 | 22 |
liver primordium | 8.47e-27 | 22 |
digestive tract diverticulum | 1.24e-25 | 23 |
epithelial sac | 1.40e-23 | 25 |
epithelium of foregut-midgut junction | 1.40e-23 | 25 |
anatomical boundary | 1.40e-23 | 25 |
hepatobiliary system | 1.40e-23 | 25 |
foregut-midgut junction | 1.40e-23 | 25 |
septum transversum | 1.40e-23 | 25 |
sac | 1.14e-22 | 26 |
exocrine gland | 5.29e-19 | 31 |
exocrine system | 5.29e-19 | 31 |
endocrine gland | 8.07e-17 | 35 |
gut epithelium | 1.40e-14 | 54 |
gland | 2.59e-13 | 59 |
endocrine system | 4.74e-13 | 45 |
abdomen element | 7.60e-11 | 54 |
abdominal segment element | 7.60e-11 | 54 |
abdominal segment of trunk | 9.69e-10 | 60 |
abdomen | 9.69e-10 | 60 |
endo-epithelium | 1.82e-09 | 82 |