FFCP PHASE1:Hg19::chr19:45844032..45844043,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147700 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20717 | |||
|TSSclassifier=strong | |||
|UniProt=Q6P597 | |||
|association_with_transcript=21bp_to_ENST00000391946_5end | |||
|description=CAGE_peak_3_at_KLC3_5end | |||
|id=chr19:45844032..45844043,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.09e-28!254;CL:0002076!1.42e-20!43;CL:0000223!1.22e-16!59;CL:0002368!1.60e-10!13;CL:0002251!3.58e-10!21;CL:0002159!1.36e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:0002159;4.61e-19;14!CL:0002328;3.34e-11;3!CL:0002166;4.12e-11;3!CL:0002231;4.12e-11;3!CL:0002621;8.02e-11;3!CL:0002076;5.35e-10;42!CL:0002077;5.83e-09;34!CL:0000764;9.90e-09;2!CL:0000558;9.90e-09;2!CL:0000244;9.96e-09;4!CL:0000731;9.96e-09;4!CL:0000575;1.26e-08;2!CL:0000312;6.16e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,6.19e-19,14;CL:0002076,5.69e-13,42;CL:0002231,3.86e-11,3;CL:0002328,4.14e-11,3;CL:0000066,4.22e-11,253;CL:0002166,5.30e-11,3;CL:0002621,7.25e-11,3;CL:0002077,2.59e-10,34;CL:0000223,6.39e-10,58;CL:0000244,7.86e-09,4;CL:0000731,7.86e-09,4;CL:0000764,1.07e-08,2;CL:0000765,1.07e-08,2;CL:0000050,1.07e-08,2;CL:0000038,1.07e-08,2;CL:0000558,1.07e-08,2;CL:0000547,1.07e-08,2;CL:0000549,1.07e-08,2;CL:0000550,1.07e-08,2;CL:0000552,1.07e-08,2;CL:0000575,1.34e-08,2;CL:0000312,5.07e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.58e-14!106;DOID:0050687!2.15e-11!143;DOID:1749!2.17e-10!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.59e-16!169;UBERON:0000925!2.59e-16!169;UBERON:0006595!2.59e-16!169;UBERON:0001004!2.56e-12!72;UBERON:0001007!1.16e-10!155;UBERON:0001555!1.16e-10!155;UBERON:0007026!1.16e-10!155;UBERON:0000077!1.26e-09!130;UBERON:0000065!1.31e-09!53;UBERON:0005911!2.08e-09!82;UBERON:0005153!7.11e-09!37;UBERON:0004921!8.38e-09!129;UBERON:0004185!8.38e-09!129;UBERON:0000161!2.67e-08!35;UBERON:0005157!3.64e-08!51;UBERON:0000344!4.96e-08!12;UBERON:0001041!9.30e-08!98;UBERON:0006554!2.97e-07!44;UBERON:0000072!3.38e-07!46;UBERON:0005631!3.72e-07!14;UBERON:0000158!3.72e-07!14;UBERON:0001008!5.73e-07!45;UBERON:0000365!6.57e-07!5;UBERON:0005156!8.16e-07!59;UBERON:0000990!8.16e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.14e-11;15!UBERON:0000179;1.14e-11;15!UBERON:0000463;1.14e-11;15!UBERON:0004815;3.34e-11;3!UBERON:0002031;3.34e-11;3!UBERON:0001949;8.02e-11;3!UBERON:0000486;5.62e-10;12!UBERON:0005911;1.51e-08;36!UBERON:0001708;1.92e-08;4!UBERON:0008895;1.92e-08;4!UBERON:0000365;4.65e-07;5!UBERON:0002185;6.91e-07;5!UBERON:0004807;7.46e-07;22!UBERON:0011159;7.82e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.09e-11,15;UBERON:0000179,1.09e-11,15;UBERON:0000463,1.09e-11,15;UBERON:0004815,4.14e-11,3;UBERON:0002031,4.14e-11,3;UBERON:0001949,7.25e-11,3;UBERON:0003102,3.27e-10,99;UBERON:0005631,2.57e-09,14;UBERON:0000158,2.57e-09,14;UBERON:0000161,3.79e-09,36;UBERON:0000166,1.68e-08,22;UBERON:0001708,2.31e-08,4;UBERON:0008895,2.31e-08,4;UBERON:0000033,1.60e-07,56;UBERON:0004119,1.64e-07,160;UBERON:0000925,1.64e-07,160;UBERON:0006595,1.64e-07,160;UBERON:0000365,3.86e-07,5;UBERON:0002185,7.84e-07,5;UBERON:0011159,9.04e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,4.88460817580699,0.655324116390517,2.63766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,1.50602959389125,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,2.5500670180478,5.19098219898201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23312862571041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,1.36373060295417,1.72082757233402,0.365921118388786,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0,0,1.40241773803446,0,0,0,0,0,0,0.368965315629341,0,1.53650399572076,4.49607013030478,1.91005047582099,0.925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,1.34385702559088,1.55952606966625,0.53735113621709,0.581267877027924,1.53353071666084,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85004114314015,4.99306318531491,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,1.80455823272956,2.20994373446151,0,0,0,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,4.60445740956463,4.70583811844821,0,0,0.325378394664303,0.103041011647722,0.27470839445503,0.165018999841176,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0.826424576804891,0.768760269460425,0.638063562472921,1.6185244936888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,2.01090682660736,0,0.0941438007767792,1.72202149068492,3.36942951335251,2.66058092122005,0.689170200620878,7.10426652925037,9.94028369285088,6.83576624608995,0.714695326373367,1.64544909234478,3.24236655596359,9.18053443304795,4.75875105776562,0.213648142254946,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87856799634377,0.890894042497916,8.29333895667927,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,4.0432885840795,0.384751292518985,0,0,0.0897576444097721,0.325942115766024,2.23300811812344,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0.300646838828985,0.414752765588989,0,0,0,0,0,0,0.347119476670262,1.7638631534588,0.435296032902013,0.17472666824203,0,0,0,0,0.775912131907355,0,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0.114536596165916,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0.335434687599266,0,0.0524545881349981,0,0,2.68681276247223,0,0,0,0,0,0,0,0.082092520749339,0,0.339936274560377,0,2.65013777824443,0,0,0.171086837884329,0.704815022316672,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0.249960815924213,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0,0,0.463044948647668,0.489473409012935,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0.655219697692825,0.245772908753719,0.211312123358627,0,0,0,0,0,1.67855409263333,1.86623178009892,0.127894371303652,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0.471878893390961,1.28400018965175,0.346576998451015,0,0,0,0,0.40341013740704,0.781514011233092,0.261906694481422,0.163771917510097,0.887136517302272,0,0,0,0,0,0,0.496211178389294,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0.236387681767936,0.222462803784138,0.078493092850514,0,0,0,0,0.47775168788705,0.214429632529969,0,0,0,0,0,0,1.38251932362818,0,0,0,0,0.22910686854405,0,0,0.447421727191169,0.294450700845729,0,0,0,0,1.94284397223656,0.233939463462106,1.59160620129095,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0.0644578879735772,0,0,0.352894871715692,0.0802413666891683,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0.203977659483963,0.26721740526556,0.459474497674225,0.50141507858475,0.151557396436479,0,0,0,0.852935927603924,0,0,0.0620747142958579,0.224263725161227,0,0,1.74173398317569,1.36893320434112,0.471464371102113,0.143444410785353,0,0.162806537221949,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p3@KLC3 | |||
}} |
Revision as of 23:54, 20 January 2014
Short description: | p3@KLC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KLC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000391946_5end |
EntrezGene: | KLC3 |
HGNC: | 20717 |
UniProt: | Q6P597 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 6.19e-19 | 14 |
endo-epithelial cell | 5.69e-13 | 42 |
epithelial cell of prostate | 3.86e-11 | 3 |
bronchial epithelial cell | 4.14e-11 | 3 |
epithelial cell | 4.22e-11 | 253 |
epithelial cell of Malassez | 5.30e-11 | 3 |
gingival epithelial cell | 7.25e-11 | 3 |
ecto-epithelial cell | 2.59e-10 | 34 |
endodermal cell | 6.39e-10 | 58 |
transitional epithelial cell | 7.86e-09 | 4 |
urothelial cell | 7.86e-09 | 4 |
erythroid lineage cell | 1.07e-08 | 2 |
erythroblast | 1.07e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 1.07e-08 | 2 |
erythroid progenitor cell | 1.07e-08 | 2 |
reticulocyte | 1.07e-08 | 2 |
proerythroblast | 1.07e-08 | 2 |
basophilic erythroblast | 1.07e-08 | 2 |
polychromatophilic erythroblast | 1.07e-08 | 2 |
orthochromatic erythroblast | 1.07e-08 | 2 |
corneal epithelial cell | 1.34e-08 | 2 |
keratinocyte | 5.07e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
blood | 1.09e-11 | 15 |
haemolymphatic fluid | 1.09e-11 | 15 |
organism substance | 1.09e-11 | 15 |
lower respiratory tract epithelium | 4.14e-11 | 3 |
epithelium of bronchus | 4.14e-11 | 3 |
gingival epithelium | 7.25e-11 | 3 |
surface structure | 3.27e-10 | 99 |
extraembryonic membrane | 2.57e-09 | 14 |
membranous layer | 2.57e-09 | 14 |
orifice | 3.79e-09 | 36 |
oral opening | 1.68e-08 | 22 |
jaw skeleton | 2.31e-08 | 4 |
splanchnocranium | 2.31e-08 | 4 |
head | 1.60e-07 | 56 |
endoderm-derived structure | 1.64e-07 | 160 |
endoderm | 1.64e-07 | 160 |
presumptive endoderm | 1.64e-07 | 160 |
urothelium | 3.86e-07 | 5 |
bronchus | 7.84e-07 | 5 |
primary subdivision of cranial skeletal system | 9.04e-07 | 5 |