FFCP PHASE1:Hg19::chr19:51520536..51520567,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:51520536..51520567,- | |||
|id=chr19:51520536..51520567,- | |||
|ontology_enrichment_celltype=CL:0000066!1.64e-14!254;CL:0002076!1.72e-09!43;CL:0002322!8.86e-08!5;CL:0000223!3.55e-07!59;CL:0002159!4.71e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.10e-16;5!CL:0002077;3.56e-11;34!CL:0002159;1.64e-10;14!CL:0000575;6.05e-08;2!CL:0000317;1.32e-07;2!CL:1000448;1.32e-07;2!CL:0002308;1.32e-07;2!CL:0002140;1.32e-07;2!CL:0002327;1.94e-07;4!CL:1000415;2.74e-07;2!CL:0002251;9.17e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.30e-17,5;CL:0000066,7.10e-14,253;CL:0002077,5.57e-13,34;CL:0002159,1.71e-10,14;CL:0000076,3.28e-09,63;CL:0000221,3.10e-08,72;CL:0000575,6.06e-08,2;CL:0000317,1.24e-07,2;CL:1000448,1.24e-07,2;CL:0002308,1.24e-07,2;CL:0002140,1.24e-07,2;CL:0002327,1.49e-07,4;CL:1000415,2.58e-07,2;CL:0002251,7.96e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.35e-10;10!UBERON:0005564;3.35e-10;10!UBERON:0008814;2.91e-07;2!UBERON:0010056;2.91e-07;2 | |||
|ontology_enrichment_disease=DOID:305!1.73e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.81e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.78e-11,14;DOID:305,7.60e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.73e-15!115;UBERON:0004121!7.47e-14!169;UBERON:0000924!1.32e-13!173;UBERON:0006601!1.32e-13!173;UBERON:0000153!2.42e-13!129;UBERON:0007811!2.42e-13!129;UBERON:0000033!7.85e-13!123;UBERON:0001049!5.03e-12!57;UBERON:0005068!5.03e-12!57;UBERON:0006241!5.03e-12!57;UBERON:0007135!5.03e-12!57;UBERON:0003075!9.34e-11!86;UBERON:0007284!9.34e-11!86;UBERON:0002346!2.34e-10!90;UBERON:0005743!8.28e-10!86;UBERON:0002616!1.52e-09!59;UBERON:0000475!8.75e-09!365;UBERON:0001017!9.06e-09!82;UBERON:0000166!2.99e-08!21;UBERON:0000464!4.42e-08!104;UBERON:0000073!6.88e-08!94;UBERON:0001016!6.88e-08!94;UBERON:0000064!8.67e-08!219;UBERON:0000062!1.28e-07!511;UBERON:0000955!1.95e-07!69;UBERON:0006238!1.95e-07!69;UBERON:0003076!3.18e-07!15;UBERON:0003057!3.18e-07!15;UBERON:0000161!4.52e-07!35;UBERON:0001004!5.83e-07!72;UBERON:0003080!6.37e-07!42;UBERON:0004111!6.59e-07!241;UBERON:0000481!7.14e-07!347;UBERON:0000466!8.13e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;3.92e-08;4!UBERON:0004785;3.92e-08;4!UBERON:0003729;4.35e-08;13!UBERON:0002419;1.32e-07;2!UBERON:0007771;1.32e-07;2!UBERON:0003297;1.32e-07;2!UBERON:0001821;1.32e-07;2!UBERON:0003487;1.32e-07;2!UBERON:0001820;1.32e-07;2!UBERON:0001911;1.94e-07;4!UBERON:0002294;2.55e-07;7!UBERON:0001173;2.55e-07;7!UBERON:0000165;3.94e-07;28!UBERON:0000161;6.34e-07;19!UBERON:0000166;6.34e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,3.45e-08,4;UBERON:0004785,3.45e-08,4;UBERON:0003729,3.53e-08,13;UBERON:0002419,1.24e-07,2;UBERON:0007771,1.24e-07,2;UBERON:0003297,1.24e-07,2;UBERON:0001821,1.24e-07,2;UBERON:0003487,1.24e-07,2;UBERON:0001820,1.24e-07,2;UBERON:0005089,1.24e-07,2;UBERON:0005088,1.24e-07,2;UBERON:0000166,1.33e-07,22;UBERON:0001911,1.49e-07,4;UBERON:0005333,1.49e-07,4;UBERON:0008425,1.49e-07,4;UBERON:0005311,1.49e-07,4;UBERON:0000165,6.30e-07,29;UBERON:0000930,6.30e-07,29;UBERON:0000344,9.82e-07,20;UBERON:0004121,9.90e-07,171;UBERON:0000924,9.90e-07,171;UBERON:0006601,9.90e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,11.2931539370688,6.67411997011973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,0.818238361772504,1.43402297694502,7.68434348616451,4.5060121229305,5.22872742912833,3.73179798055334,4.54177531576131,4.01475094983413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,3.07300799144152,0,2.21163739305588,2.96283024507295,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,2.85569617938061,0.850650583454319,1.70161193135412,1.45316969256981,8.43441894163465,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.904318131178758,0.871533458600294,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,2.4861867012692,0,0,0,3.15839729035188,0.770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0.764628819135115,1.66215201785745,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0,3.44559322797703,5.20048196829217,0,0,0,0,0,0,0,0,0,0,0.576570202095319,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0,0,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0.213648142254946,0,3.43056302373444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0.284136146806413,0.23874448473769,0,0.614321404198464,0,0.562677665642051,0,0,0,0,0,0,0,0,0,1.25815691606258,0.358042349351218,0,0,0,0,0,0.649376687132959,0,0,0,0.724999575434793,0.227586896570999,0.762760950878299,2.12748913591143,0,0,0,0,0.120596438625408,1.52581736317083,0.110579259931225,1.47773809476774,0,0,0.139423744278603,1.15425387755696,0,0,0,0.108647371922008,0.31900115973192,0,0.533034776018635,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.404406797884062,0,0.468528891450678,0,0.586993856796269,0.971121518136371,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0.347119476670262,7.64340699832146,0,0.873633341210151,0,0,0,0,1.35784623083787,0.176512253383001,0.451961481561065,0,0,0.253243183823515,2.34661659281764,3.52698809106748,0.426905989478705,4.19600180122473,0,0.572682980829578,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.272406812223151,2.73280352390533,3.43848591493084,2.9080823662043,0,0,0.364497339948148,2.0126081255956,0,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.517131825446202,0.79339561045614,0,7.75296524548339,0.106787412567695,0.471612915298998,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0.244052529803926,0,1.14681839138014,0.665574309221114,0.683060432355218,0,0,0,0,0.470531639396343,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,1.71553273099941,0.260994291965212,0,0,0,0,1.23520578864389,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0.163565394255844,0,0,2.11312123358627,0,0.106691729694141,0,0,0,3.21722867754722,3.11038630016486,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.385375350578757,0,0,0.41023272848151,0.252071696221718,0.345786262321089,0.807378228159255,0,0,2.94924308369351,22.3782890196448,7.74021963207266,0,0,0,3.45967510406583,0,0,0,0,5.17496301759658,0.472763092328763,1.56215619722769,0.206686796501184,0.126831620387814,1.09394961803644,0.548257766857182,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0,4.41803264349406,0.526182188502793,0.118193840883968,0.111231401892069,0.470958557103084,0.157115589916002,0,0,0,0,0.500335809236594,0,0,0,0,0.207216164163037,0.17071847709395,0,1.29068207646083,0,0,0,0.4582137370881,0,0,0.335566295393377,0.098150233615243,0.853425474875886,0,0,0,0,0,1.19370465096821,0,0,0,0,0,0,0,0,0,0.785233868459781,0,0.4226557275834,0,0,0.45120521581504,0,7.32071148283196,0,5.0552061014176,0,1.83491713361816,0,0.157771562193185,0.203974470572744,0,0,0,0,0,0,0,0,0.305966489225945,2.6721740526556,1.19463369395298,0.752122617877125,1.36401656792831,1.33982065078089,0.829169439458779,0.103432995861895,0.426467963801962,0,0.0645889098360061,0.31037357147929,0,0.12729431655633,0.202117188958219,1.52401723527873,0.684466602170562,0.606168477131288,0.573777643141411,0,0,0,0,0,0,0.488965776731466,0,0,0.201273793591026,0 | |||
|short_description=p@chr19:51520536..51520567,- | |||
}} |
Revision as of 00:45, 21 January 2014
Short description: | p@chr19:51520536..51520567, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:51520536..51520567, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.30e-17 | 5 |
epithelial cell | 7.10e-14 | 253 |
ecto-epithelial cell | 5.57e-13 | 34 |
general ecto-epithelial cell | 1.71e-10 | 14 |
squamous epithelial cell | 3.28e-09 | 63 |
ectodermal cell | 3.10e-08 | 72 |
corneal epithelial cell | 6.06e-08 | 2 |
sebum secreting cell | 1.24e-07 | 2 |
epithelial cell of sweat gland | 1.24e-07 | 2 |
epithelial cell of skin gland | 1.24e-07 | 2 |
acinar cell of sebaceous gland | 1.24e-07 | 2 |
mammary gland epithelial cell | 1.49e-07 | 4 |
epithelial cell of gall bladder | 2.58e-07 | 2 |
epithelial cell of alimentary canal | 7.96e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 3.45e-08 | 4 |
respiratory system mucosa | 3.45e-08 | 4 |
mouth mucosa | 3.53e-08 | 13 |
skin gland | 1.24e-07 | 2 |
epidermis gland | 1.24e-07 | 2 |
gland of integumental system | 1.24e-07 | 2 |
sebaceous gland | 1.24e-07 | 2 |
skin sebaceous gland | 1.24e-07 | 2 |
sweat gland | 1.24e-07 | 2 |
sweat gland placode | 1.24e-07 | 2 |
sebaceous gland placode | 1.24e-07 | 2 |
oral opening | 1.33e-07 | 22 |
mammary gland | 1.49e-07 | 4 |
mammary bud | 1.49e-07 | 4 |
mammary ridge | 1.49e-07 | 4 |
mammary placode | 1.49e-07 | 4 |
mouth | 6.30e-07 | 29 |
stomodeum | 6.30e-07 | 29 |
mucosa | 9.82e-07 | 20 |
ectoderm-derived structure | 9.90e-07 | 171 |
ectoderm | 9.90e-07 | 171 |
presumptive ectoderm | 9.90e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.78e-11 | 14 |
carcinoma | 7.60e-07 | 106 |