FFCP PHASE1:Hg19::chr19:51893827..51893851,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147646 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NM_001193623,uc002pwn.2_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_LOC147646_5end | |||
|id=chr19:51893827..51893851,- | |||
|ontology_enrichment_celltype=CL:0002322!3.16e-12!5;CL:0002619!9.97e-08!3;CL:0000453!8.74e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.06e-35;5!CL:0000039;6.86e-15;7!CL:0000586;6.86e-15;7!CL:0002321;5.76e-12;15!CL:0000540;2.91e-08;6!CL:0000404;2.91e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.35e-35,5;CL:0000039,6.40e-15,7;CL:0000586,6.40e-15,7;CL:0000540,2.34e-08,6;CL:0000031,2.34e-08,6;CL:0000404,2.34e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.18e-28;10!UBERON:0005564;5.18e-28;10!CL:0000031;2.91e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;4.46e-13;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.85e-13,8 | |||
|ontology_enrichment_uberon=UBERON:0003135!1.10e-12!11;UBERON:0000473!1.09e-10!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.41e-35;8!UBERON:0003135;1.80e-25;11!UBERON:0000991;2.47e-13;21!UBERON:0003101;1.00e-12;22!UBERON:0000079;1.00e-12;22!UBERON:0000922;9.39e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.89e-35,8;UBERON:0003135,1.67e-25,11;UBERON:0000991,2.38e-13,21;UBERON:0009196,2.38e-13,21;UBERON:0009117,2.38e-13,21;UBERON:0005564,2.38e-13,21;UBERON:0004176,9.69e-13,22;UBERON:0003101,9.69e-13,22;UBERON:0000079,9.69e-13,22;UBERON:0002323,2.27e-08,46;UBERON:0004458,7.84e-08,49;UBERON:0003886,4.56e-07,54 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0,0,0.662794751455832,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,1.11957737119962,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,3.99486180268024,0,0,0,0,0,0,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70763188581434,1.06023814657188,1.51052125730374,1.0366105501537,0.756962552626885,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,1.35357396370308,2.15668787749514,1.00692952185506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,1.28602518772015,0.962776056180637,1.66176135211674,0.2249738915515,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.453248366080503,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0,0,0.252332849670158,0,0,0.713921808193872,1.3360870263278,3.12442658418473,1.25353769646188,10.3059029576806,8.30688803484153,0,0.103432995861895,0,0,0.452122368852043,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@LOC147646 | |||
}} |
Revision as of 00:48, 21 January 2014
Short description: | p1@LOC147646 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC147646_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_NM_001193623, uc002pwn.2_5end |
EntrezGene: | LOC147646 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.35e-35 | 5 |
germ line cell | 6.40e-15 | 7 |
germ cell | 6.40e-15 | 7 |
neuron | 2.34e-08 | 6 |
neuroblast | 2.34e-08 | 6 |
electrically signaling cell | 2.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 4.89e-35 | 8 |
male reproductive organ | 1.67e-25 | 11 |
gonad | 2.38e-13 | 21 |
indifferent external genitalia | 2.38e-13 | 21 |
indifferent gonad | 2.38e-13 | 21 |
gonad primordium | 2.38e-13 | 21 |
external genitalia | 9.69e-13 | 22 |
male organism | 9.69e-13 | 22 |
male reproductive system | 9.69e-13 | 22 |
body cavity | 2.27e-08 | 46 |
body cavity or lining | 7.84e-08 | 49 |
body cavity precursor | 4.56e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.85e-13 | 8 |