FFCP PHASE1:Hg19::chr2:128398076..128398085,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55679 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16084 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-98bp_to_ENST00000494613_5end | |||
|description=CAGE_peak_43_at_LIMS2_5end | |||
|id=chr2:128398076..128398085,- | |||
|ontology_enrichment_celltype=CL:1000413!6.62e-11!9;CL:0000071!1.11e-08!18;CL:0002546!1.11e-08!18;CL:0002536!8.13e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002536;4.66e-21;2!CL:0000084;2.35e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,4.66e-21,2;CL:0000084,2.35e-07,25;CL:0000827,2.35e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;1.48e-40;1!DOID:3350;4.66e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.21e-40,1;DOID:3350,5.70e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0003915!6.62e-11!9;UBERON:0004700!6.62e-11!9;UBERON:0001917!6.62e-11!9;UBERON:0001986!1.11e-08!18;UBERON:0004638!1.11e-08!18;UBERON:0004852!1.11e-08!18;UBERON:0001981!7.33e-08!60;UBERON:0007500!7.33e-08!60;UBERON:0004537!7.33e-08!60;UBERON:0006965!7.33e-08!60;UBERON:0001637!5.42e-07!42;UBERON:0003509!5.42e-07!42;UBERON:0004572!5.42e-07!42;UBERON:0004872!7.07e-07!84;UBERON:0000487!7.71e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;5.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,5.70e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,1.05506791291381,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501559486172034,0,0,0,0.334231370655521,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0,0,0.906474741580529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0.343143423810856,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.290033387828457,0,0,0,0,0,0,0.464845549297286,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0.144269212976445,1.35169502361987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,1.0319161948297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p43@LIMS2 | |||
}} |
Revision as of 05:20, 21 January 2014
Short description: | p43@LIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_43_at_LIMS2_5end |
Coexpression cluster: | NA |
Association with transcript: | -98bp_to_ENST00000494613_5end |
EntrezGene: | LIMS2 |
HGNC: | 16084 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 4.66e-21 | 2 |
T cell | 2.35e-07 | 25 |
pro-T cell | 2.35e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
amnion | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.21e-40 | 1 |
mesenchymal cell neoplasm | 5.70e-21 | 2 |