FFCP PHASE1:Hg19::chr2:171572699..171572713,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389058 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=14529 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-9bp_to_BC069026_5end | |||
|coexpression_cluster_id=C258 | |||
|description=CAGE_peak_7_at_SP5_5end | |||
|id=chr2:171572699..171572713,+ | |||
|ontology_enrichment_celltype=CL:0002322!9.76e-17!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.33e-27;5!CL:0000182;4.39e-21;12!CL:0000148;3.67e-14;10!CL:0000147;2.71e-10;14!CL:0002321;1.20e-09;15!CL:0002253;5.71e-09;2!CL:0000710;2.26e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.01e-27,5;CL:0000182,4.39e-21,12;CL:0000148,3.20e-14,10;CL:0000541,3.20e-14,10;CL:0000147,2.46e-10,14;CL:0000223,2.22e-09,58;CL:0002253,5.49e-09,2;CL:0000710,2.12e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.80e-23;11!UBERON:0009497;1.71e-19;13!UBERON:0003104;1.57e-12;31!UBERON:0001041;1.29e-08;30 | |||
|ontology_enrichment_disease=DOID:3910!4.70e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.93e-08!115;UBERON:0004921!4.47e-07!129;UBERON:0004185!4.47e-07!129;UBERON:0004903!4.70e-07!2;UBERON:0002173!4.70e-07!2;UBERON:0002186!4.70e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.90e-13;19!UBERON:0006925;1.90e-13;19!UBERON:0002423;2.73e-10;25!UBERON:0002365;6.11e-08;31!UBERON:0002330;6.11e-08;31!UBERON:0002368;2.89e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.90e-13,19;UBERON:0006925,1.90e-13,19;UBERON:0008836,1.90e-13,19;UBERON:0008835,1.18e-11,22;UBERON:0003894,1.18e-11,22;UBERON:0009854,3.67e-11,23;UBERON:0007499,2.73e-10,25;UBERON:0009497,2.73e-10,25;UBERON:0000015,2.73e-10,25;UBERON:0002423,2.73e-10,25;UBERON:0006235,2.73e-10,25;UBERON:0004161,2.73e-10,25;UBERON:0003929,4.27e-10,54;UBERON:0009856,6.64e-10,26;UBERON:0002365,2.40e-08,31;UBERON:0002330,2.40e-08,31;UBERON:0002368,2.04e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.397589304964456,1.97529702878181,1.24393266018445,1.7662459561294,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29632954224082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68570835724488,0,0,0.265372693510018,0,0.296521128680622,0,0.417687798021821,0,0,0,0,0,0,0,1.20990716048664,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,4.00878086580705,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,15.144473438569,5.987521855349,6.67568452887448,6.6729508415643,0,0,0,0,0.964518890790115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487671699929078,0,0,0,0.485710993059139,0,0,0,0.90356865631168,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,4.25983217921598,0,0,0,0,0,0,0,0,0.886889507080059,0,0.26721740526556,0.0918948995348449,0,0.530450887527676,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.80822463617505,0.286888821570705,0,0.0814032686109745,0,0,0,0,0.855690109280065,0,0.665756774185513,0,0 | |||
|short_description=p7@SP5 | |||
}} |
Revision as of 06:32, 21 January 2014
Short description: | p7@SP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SP5_5end |
Coexpression cluster: | C258_hepatoblastoma_hepatocellular_signet_colon_Intestinal_Prostate_gastric |
Association with transcript: | -9bp_to_BC069026_5end |
EntrezGene: | SP5 |
HGNC: | 14529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.01e-27 | 5 |
hepatocyte | 4.39e-21 | 12 |
melanocyte | 3.20e-14 | 10 |
melanoblast | 3.20e-14 | 10 |
pigment cell | 2.46e-10 | 14 |
endodermal cell | 2.22e-09 | 58 |
epithelial cell of large intestine | 5.49e-09 | 2 |
neurecto-epithelial cell | 2.12e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 1.90e-13 | 19 |
digestive gland | 1.90e-13 | 19 |
liver bud | 1.90e-13 | 19 |
hepatic diverticulum | 1.18e-11 | 22 |
liver primordium | 1.18e-11 | 22 |
digestive tract diverticulum | 3.67e-11 | 23 |
epithelial sac | 2.73e-10 | 25 |
epithelium of foregut-midgut junction | 2.73e-10 | 25 |
anatomical boundary | 2.73e-10 | 25 |
hepatobiliary system | 2.73e-10 | 25 |
foregut-midgut junction | 2.73e-10 | 25 |
septum transversum | 2.73e-10 | 25 |
gut epithelium | 4.27e-10 | 54 |
sac | 6.64e-10 | 26 |
exocrine gland | 2.40e-08 | 31 |
exocrine system | 2.40e-08 | 31 |
endocrine gland | 2.04e-07 | 35 |