FFCP PHASE1:Hg19::chr2:201560569..201560578,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=7bp_to_ENST00000484406_5end | |||
|coexpression_cluster_id=C1076 | |||
|description=CAGE_peak_4_at_ENST00000484406_5end | |||
|id=chr2:201560569..201560578,+ | |||
|ontology_enrichment_celltype=CL:0000819!1.54e-15!1;CL:0001024!2.38e-15!1;CL:0000785!2.00e-08!2;CL:0000955!2.00e-08!2;CL:0000818!2.00e-08!2;CL:0000954!2.00e-08!2;CL:0000816!2.00e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002032;1.81e-40;1!CL:0000557;1.81e-40;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060073!1.54e-15!1;DOID:8675!1.54e-15!1;DOID:225!3.17e-15!1;DOID:2531!9.42e-10!51;DOID:0060083!9.42e-10!51;DOID:1240!4.29e-09!39;DOID:74!2.87e-08!2;DOID:8692!1.24e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.79e-15!4;UBERON:0005058!1.79e-15!4;UBERON:0009113!1.79e-15!4;UBERON:0003295!1.79e-15!4;UBERON:0005562!1.79e-15!4;UBERON:0003351!1.24e-10!6;UBERON:0004177!3.04e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.91e-79;2!UBERON:0005058;1.91e-79;2!UBERON:0009113;1.91e-79;2!UBERON:0004177;1.33e-32;5!UBERON:0005057;1.33e-32;5!UBERON:0002405;4.96e-14;27!UBERON:0002390;3.81e-10;32!UBERON:0002193;4.68e-07;42!UBERON:0000077;6.72e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.71e-40,4;UBERON:0005058,2.71e-40,4;UBERON:0009113,2.71e-40,4;UBERON:0003295,2.71e-40,4;UBERON:0005562,2.71e-40,4;UBERON:0003351,2.72e-27,6;UBERON:0004177,1.44e-23,7;UBERON:0005057,1.44e-23,7;UBERON:0000974,7.51e-17,10;UBERON:0003408,7.51e-17,10;UBERON:0001042,7.51e-17,10;UBERON:0009145,7.51e-17,10;UBERON:0006562,2.02e-15,11;UBERON:0009722,2.02e-15,11;UBERON:0007690,2.02e-15,11;UBERON:0008814,7.76e-10,18;UBERON:0001557,2.26e-09,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0.649243880549111,0,1.82587743226554,0,0,0,0.321176150207399,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0980114672121,2.23468971465088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | |||
|short_description=p4@ENST00000484406 | |||
}} |
Revision as of 07:50, 21 January 2014
Short description: | p4@ENST00000484406 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000484406_5end |
Coexpression cluster: | C1076_thymus_acute_granulocyte_vein_CD34_Dendritic_Hodgkin |
Association with transcript: | 7bp_to_ENST00000484406_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.71e-40 | 4 |
hemolymphoid system gland | 2.71e-40 | 4 |
thymic region | 2.71e-40 | 4 |
pharyngeal gland | 2.71e-40 | 4 |
thymus primordium | 2.71e-40 | 4 |
pharyngeal epithelium | 2.72e-27 | 6 |
hemopoietic organ | 1.44e-23 | 7 |
immune organ | 1.44e-23 | 7 |
neck | 7.51e-17 | 10 |
gland of gut | 7.51e-17 | 10 |
chordate pharynx | 7.51e-17 | 10 |
pharyngeal region of foregut | 7.51e-17 | 10 |
pharynx | 2.02e-15 | 11 |
entire pharyngeal arch endoderm | 2.02e-15 | 11 |
early pharyngeal endoderm | 2.02e-15 | 11 |
pharyngeal arch system | 7.76e-10 | 18 |
upper respiratory tract | 2.26e-09 | 19 |