FFCP PHASE1:Hg19::chr2:213887131..213887164,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr2:213887131..213887164,- | |||
|id=chr2:213887131..213887164,- | |||
|ontology_enrichment_celltype=CL:0000838!1.71e-16!52;CL:0000542!3.94e-16!53;CL:0000051!3.94e-16!53;CL:0000815!8.49e-13!2;CL:0000792!8.49e-13!2;CL:0002677!8.49e-13!2;CL:0000945!1.42e-11!24;CL:0000826!1.42e-11!24;CL:0000624!3.13e-09!6;CL:0000898!8.09e-09!3;CL:0000946!1.98e-07!1;CL:0000786!1.98e-07!1;CL:0000980!1.98e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.46e-44;24!CL:0000946;3.28e-23;1!CL:0000786;3.28e-23;1!CL:0000815;3.43e-12;2!CL:0000792;3.43e-12;2!CL:0002677;3.43e-12;2!CL:0000542;7.38e-11;53!CL:0000898;1.46e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.42e-44,24;CL:0000826,1.42e-44,24;CL:0000838,8.80e-27,52;CL:0000542,2.82e-26,53;CL:0000051,2.82e-26,53;CL:0000946,3.28e-23,1;CL:0000786,3.28e-23,1;CL:0000980,3.28e-23,1;CL:0000785,2.59e-12,2;CL:0000955,2.59e-12,2;CL:0000818,2.59e-12,2;CL:0000954,2.59e-12,2;CL:0000816,2.59e-12,2;CL:0000815,3.62e-12,2;CL:0000792,3.62e-12,2;CL:0002677,3.62e-12,2;CL:0002087,6.21e-12,115;CL:0002031,1.98e-11,120;CL:0000738,4.57e-10,136;CL:0000817,1.21e-08,3;CL:0000898,1.51e-08,3;CL:0002032,1.82e-08,161;CL:0000837,1.82e-08,161;CL:0000037,4.20e-08,168;CL:0000988,1.12e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000954;2.59e-12;2!CL:0000051;7.38e-11;53 | |||
|ontology_enrichment_disease=DOID:630!2.10e-07!1;DOID:0050177!2.10e-07!1;DOID:0050427!2.10e-07!1;DOID:2355!2.23e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;4.10e-23;1!DOID:0050177;4.10e-23;1!DOID:0050427;4.10e-23;1!DOID:2355;5.73e-23;1!DOID:74;3.43e-12;2!DOID:0060058;8.27e-10;10!DOID:1287;9.90e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.10e-23,1;DOID:0050177,4.10e-23,1;DOID:0050427,4.10e-23,1;DOID:2355,5.13e-23,1;DOID:74,3.24e-12,2;DOID:0060058,8.09e-10,10;DOID:1287,9.63e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002134!2.67e-07!1;UBERON:0005208!2.67e-07!1;UBERON:0005946!2.67e-07!1;UBERON:0005965!2.67e-07!1;UBERON:0002078!2.67e-07!1;UBERON:0001874!7.73e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.31e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.31e-09,3;UBERON:0004854,8.31e-09,3;UBERON:0009034,8.31e-09,3;UBERON:0002095,8.31e-09,3;UBERON:0004782,8.31e-09,3;UBERON:0003281,8.31e-09,3;UBERON:0009664,8.31e-09,3;UBERON:0002296,8.31e-09,3;UBERON:0005602,8.31e-09,3;UBERON:0001179,8.31e-09,3;UBERON:0006293,8.31e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9204912966804,10.6730766284929,9.68142610158255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.668745981562712,0.32592226663359,0,0,0.334231370655521,1.17842362989935,0.664601683750863,0.270803863765016,0.384273959177026,0.910415432919148,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0,0,0,6.76966430035882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,1.94748663751304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87693336534474,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2927621787663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.286888821570705,0,0,0,0,0,0,0,0,0,0,2.56454793842586 | |||
|short_description=p@chr2:213887131..213887164,- | |||
}} |
Revision as of 08:17, 21 January 2014
Short description: | p@chr2:213887131..213887164, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:213887131..213887164, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.42e-44 | 24 |
pro-B cell | 1.42e-44 | 24 |
lymphoid lineage restricted progenitor cell | 8.80e-27 | 52 |
lymphocyte | 2.82e-26 | 53 |
common lymphoid progenitor | 2.82e-26 | 53 |
antibody secreting cell | 3.28e-23 | 1 |
plasma cell | 3.28e-23 | 1 |
plasmablast | 3.28e-23 | 1 |
mature B cell | 2.59e-12 | 2 |
pre-B-II cell | 2.59e-12 | 2 |
transitional stage B cell | 2.59e-12 | 2 |
small pre-B-II cell | 2.59e-12 | 2 |
immature B cell | 2.59e-12 | 2 |
regulatory T cell | 3.62e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.62e-12 | 2 |
naive regulatory T cell | 3.62e-12 | 2 |
nongranular leukocyte | 6.21e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.98e-11 | 120 |
leukocyte | 4.57e-10 | 136 |
precursor B cell | 1.21e-08 | 3 |
naive T cell | 1.51e-08 | 3 |
hematopoietic oligopotent progenitor cell | 1.82e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.82e-08 | 161 |
hematopoietic stem cell | 4.20e-08 | 168 |
hematopoietic cell | 1.12e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.31e-09 | 3 |
gastrointestinal system mesentery | 8.31e-09 | 3 |
stomach region | 8.31e-09 | 3 |
mesentery | 8.31e-09 | 3 |
gastrointestinal system serosa | 8.31e-09 | 3 |
mesentery of stomach | 8.31e-09 | 3 |
gut mesentery | 8.31e-09 | 3 |
dorsal mesentery | 8.31e-09 | 3 |
dorsal mesogastrium | 8.31e-09 | 3 |
peritoneal cavity | 8.31e-09 | 3 |
spleen primordium | 8.31e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.10e-23 | 1 |
monogenic disease | 4.10e-23 | 1 |
xeroderma pigmentosum | 4.10e-23 | 1 |
anemia | 5.13e-23 | 1 |
hematopoietic system disease | 3.24e-12 | 2 |
lymphoma | 8.09e-10 | 10 |
cardiovascular system disease | 9.63e-07 | 4 |