FFCP PHASE1:Hg19::chr2:216299437..216299441,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_at_chr2:216299437..216299441,- | |||
|id=chr2:216299437..216299441,- | |||
|ontology_enrichment_celltype=CL:0000055!3.92e-23!180;CL:0000057!1.09e-19!75;CL:0002620!1.90e-12!23;CL:0002371!1.09e-08!591;CL:0000048!2.27e-08!430;CL:0000723!2.58e-08!436;CL:0000034!3.60e-08!444;CL:0002494!1.48e-07!16;CL:0000144!1.70e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.05e-16;3!CL:0002549;8.76e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.18e-16,3;CL:0002549,9.02e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!6.50e-07!5;DOID:450!6.50e-07!5;DOID:66!6.50e-07!5;DOID:423!6.50e-07!5;DOID:0080000!6.50e-07!5;DOID:11722!6.50e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:3571;2.60e-12;1!DOID:3350;8.76e-07;2!DOID:3307;8.76e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,1.75e-12,1;DOID:3307,6.42e-07,2;DOID:3350,7.20e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000948!2.24e-07!24;UBERON:0005498!2.24e-07!24;UBERON:0004140!2.24e-07!24;UBERON:0009881!2.24e-07!24;UBERON:0004141!2.24e-07!24;UBERON:0003084!2.24e-07!24;UBERON:0007005!2.24e-07!24;UBERON:0004139!2.24e-07!24;UBERON:0004291!2.24e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.05e-16;3!UBERON:0000920;3.05e-16;3!UBERON:0005629;8.76e-07;2!UBERON:0005358;8.76e-07;2!UBERON:0001886;8.76e-07;2!UBERON:0004086;8.76e-07;2!UBERON:0005282;8.76e-07;2!UBERON:0005281;8.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.18e-16,3;UBERON:0003124,1.84e-07,7;UBERON:0005629,9.02e-07,2;UBERON:0005358,9.02e-07,2;UBERON:0001886,9.02e-07,2;UBERON:0004086,9.02e-07,2;UBERON:0005282,9.02e-07,2;UBERON:0005281,9.02e-07,2 | |||
|phase1_expression=0,0.428201047781966,0,2.00146596706261,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0.816002764977012,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0,0.795285947051099,3.89307896242109,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.529636723252875,1.72101972449288,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0.67355336034844,0.163461903113459,0.454072282934794,1.15235184896,0,0.312160076830321,0.570471821544449,0.149448680551801,0,0,0.280901613404497,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0.300476117813194,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,1.20036438433761,0.103052529238439,1.03056216018252,0,0.843881661206331,0.389748020644795,1.00973509697646,0.184099797284599,0.161646056818812,0,0.201504196455281,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.542530047399471,0.623912584592421,1.07057393278297,0.315404830067869,0.35142424497814,0.601892199455438,4.5481500811197,0,0.664225598535437,1.29058417979192,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0,0,0.321707842287215,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.767518373630648,0.275673144969061,0.107420244868274,0.290033387828457,0.0852266274161009,0,0.165284915360978,0,0,0.2023155617111,0,2.51849877464512,0,0,0,0,0,0.572499546967965,0,0,0,0.255897791311334,0.42793898803392,0,0.78494864019923,0,0,0.353437207037059,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0.614321404198464,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50901275705111,0.366390373607449,8.52855641629816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,1.44119953416961,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0.457680136793847,0.907385542579434,0.15543720058278,0,0,0,0.155262956876259,0,0.53168342911599,0,0,0,0,0.363697318405119,0.107410557042488,0,0,0,0,1.01024846629776,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0.954013051960256,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,1.0085253435176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0.22910686854405,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:216299437..216299441,- | |||
}} |
Revision as of 08:28, 21 January 2014
Short description: | p@chr2:216299437..216299441, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216299437..216299441, - |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.18e-16 | 3 |
fibroblast of choroid plexus | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.18e-16 | 3 |
chorion | 1.84e-07 | 7 |
vascular plexus | 9.02e-07 | 2 |
ventricle of nervous system | 9.02e-07 | 2 |
choroid plexus | 9.02e-07 | 2 |
brain ventricle | 9.02e-07 | 2 |
ventricular system of brain | 9.02e-07 | 2 |
ventricular system of central nervous system | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.75e-12 | 1 |
teratoma | 6.42e-07 | 2 |
mesenchymal cell neoplasm | 7.20e-07 | 2 |