FFCP PHASE1:Hg19::chr2:219264063..219264074,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58190 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21614 | |||
|TSSclassifier=weak | |||
|UniProt=Q9GZU7 | |||
|association_with_transcript=-403bp_to_ENST00000273062,NM_021198,NM_182642,uc002vhx.2,uc002vhy.2_5end | |||
|description=CAGE_peak_16_at_CTDSP1_5end | |||
|id=chr2:219264063..219264074,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.67e-14!140;CL:0002031!8.41e-12!124;CL:0000988!9.49e-12!182;CL:0002087!4.31e-11!119;CL:0000037!9.85e-11!172;CL:0000566!9.85e-11!172;CL:0002393!1.22e-09!9;CL:0002397!1.22e-09!9;CL:0002032!1.30e-08!165;CL:0000837!1.30e-08!165;CL:0000766!1.45e-07!76;CL:0000084!8.37e-07!25;CL:0000827!8.37e-07!25;CL:0000838!9.07e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.85e-20;3!CL:0000784;7.59e-20;3!CL:0000771;2.37e-14;2!CL:0000094;2.67e-13;8!CL:0000081;1.04e-09;11!CL:0000625;1.12e-09;11!CL:0000791;7.45e-09;18!CL:0000789;7.45e-09;18!CL:0002419;7.45e-09;18!CL:0000511;9.38e-08;1!CL:0002625;9.38e-08;1!CL:0000216;9.38e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.03e-20,3;CL:0000825,1.03e-20,3;CL:0000784,5.01e-20,3;CL:0000738,6.19e-17,136;CL:0000771,2.02e-14,2;CL:0000988,1.91e-13,177;CL:0000094,2.04e-13,8;CL:0000037,6.30e-13,168;CL:0000081,8.58e-10,11;CL:0002032,1.85e-09,161;CL:0000837,1.85e-09,161;CL:0000625,1.90e-09,11;CL:0000791,1.00e-08,18;CL:0000789,1.00e-08,18;CL:0002420,1.00e-08,18;CL:0002419,1.00e-08,18;CL:0000790,1.00e-08,18;CL:0000838,1.05e-08,52;CL:0000542,1.63e-08,53;CL:0000051,1.63e-08,53;CL:0002087,2.63e-08,115;CL:0000511,6.10e-08,1;CL:0002625,6.10e-08,1;CL:0000216,6.10e-08,1;CL:0002031,7.43e-08,120;CL:0002393,3.08e-07,9;CL:0002397,3.08e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;7.45e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;9.38e-08;1!UBERON:0001343;9.38e-08;1!UBERON:0004910;9.38e-08;1!UBERON:0004813;9.38e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.10e-08,1;UBERON:0001343,6.10e-08,1;UBERON:0004910,6.10e-08,1;UBERON:0005154,6.10e-08,1;UBERON:0005295,6.10e-08,1;UBERON:0004813,6.10e-08,1;UBERON:0005297,6.10e-08,1;UBERON:0005294,6.10e-08,1;UBERON:0010141,6.10e-08,1;UBERON:0005891,6.10e-08,1 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0,1.18009283054671,0,0.464448369948228,0,0.30120591877825,0.369754010166788,0,0.426507697462265,0.587200878669695,2.21598163412751,0.601633342410425,0.868043482863407,0,0,0,0.290796477559129,0,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0,0.512321413058201,0.236482229888585,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0.633765858935825,2.55125159958052,0.838634582033504,0.44931452458598,0.450530678524519,0.16072558669708,0.855038231223746,1.39241674039363,0.91332076882317,1.75996244461323,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,0,1.68152568894461,0,0.983548850569165,1.57204305099666,0.411202997999018,0.501559486172034,0.32592226663359,0,0,0,0.589211814949674,0.664601683750863,0.812411591295047,0.640456598628376,1.1705341280389,0.657751618414705,0,0.869409257205157,0,0.802622484269139,0,0.906474741580529,0,1.03088233644789,0.253019692019503,0.318565414324097,0,0,0.301150238155546,1.02389288923535,0,0.473554504088034,0,1.00803371612366,2.13952156626806,1.30341963494519,0,0,0.12786256184353,0,0,0,0,0.973269740605272,0,0,0,0.130979075497713,0,0,0,0,0,1.19245312152671,1.14398982156026,1.85728750664782,0,0,0,0,0,0,0.417989933073621,0,0,0.66944122552934,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0.49333509683432,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.441175890929576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0.264145302039678,0.621984346622316,2.59415916150531,0.6312121671319,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0.502257091432126,0,0.718874566474748,0,0,0,0,0.358121926479791,0,1.77327684181734,2.58753089831421,1.54011643535698,0,0,0,0,0,0,0,1.65766205374414,0,0,0,0,0.356857977594324,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0.391602314925481,0.343143423810856,0.206768026122887,2.5885704098234,0.426910231213777,0.303127571446259,0,0.30239029332968,0,0,0.280660094433074,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0.120859449591622,0.601519410909855,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.219259876645935,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0,0.330569830721956,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.470719003883896,0.43050537267123,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0.0711418433484141,0.318852545457645,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0.21787692703798,0.139423744278603,0.0769502585037971,0,0,0,0.325942115766024,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0.189753732724185,0.317873157960757,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0.494255755786011,1.04421949505455,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0.103688191397247,0.664653872707185,0.330991955875499,0,0,0,0.138674673013139,0,0,0.174118413160805,0,0,0,0,0.0821154570532092,0,0,0.225980740780532,0,0,0,0,0.160317640503067,0,0,0.288180834308212,0.343609788497747,0.343189995723929,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0.399358000997982,0.429226048136571,0,0.335917362433631,0,0,0.315132729228895,0.659326867049332,0.337017719270924,0,0.0846733320657845,0,0.272406812223151,0,0,0,0,0,0,0.335434687599266,0.0788057072991982,0.314727528809989,0.844802692155252,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.533937062838473,0.943225830597996,0.828478110694391,0,0.197611631897944,0,0,0,0.2506898940227,0.306345576763462,0,0.314108192500469,0,0,0,0,0.221858103073705,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,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| |||
|short_description=p16@CTDSP1 | |||
}} |
Revision as of 08:39, 21 January 2014
Short description: | p16@CTDSP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CTDSP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -403bp_to_ENST00000273062, NM_021198, NM_182642, uc002vhx.2, uc002vhy.2_5end |
EntrezGene: | CTDSP1 |
HGNC: | 21614 |
UniProt: | Q9GZU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.03e-20 | 3 |
pro-NK cell | 1.03e-20 | 3 |
plasmacytoid dendritic cell | 5.01e-20 | 3 |
leukocyte | 6.19e-17 | 136 |
eosinophil | 2.02e-14 | 2 |
hematopoietic cell | 1.91e-13 | 177 |
granulocyte | 2.04e-13 | 8 |
hematopoietic stem cell | 6.30e-13 | 168 |
blood cell | 8.58e-10 | 11 |
hematopoietic oligopotent progenitor cell | 1.85e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-09 | 161 |
CD8-positive, alpha-beta T cell | 1.90e-09 | 11 |
mature alpha-beta T cell | 1.00e-08 | 18 |
alpha-beta T cell | 1.00e-08 | 18 |
immature T cell | 1.00e-08 | 18 |
mature T cell | 1.00e-08 | 18 |
immature alpha-beta T cell | 1.00e-08 | 18 |
lymphoid lineage restricted progenitor cell | 1.05e-08 | 52 |
lymphocyte | 1.63e-08 | 53 |
common lymphoid progenitor | 1.63e-08 | 53 |
nongranular leukocyte | 2.63e-08 | 115 |
androgen binding protein secreting cell | 6.10e-08 | 1 |
seminiferous tubule epithelial cell | 6.10e-08 | 1 |
Sertoli cell | 6.10e-08 | 1 |
hematopoietic lineage restricted progenitor cell | 7.43e-08 | 120 |
intermediate monocyte | 3.08e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.08e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 6.10e-08 | 1 |
seminiferous tubule of testis | 6.10e-08 | 1 |
epithelium of male gonad | 6.10e-08 | 1 |
epithelial cord | 6.10e-08 | 1 |
sex cord | 6.10e-08 | 1 |
seminiferous tubule epithelium | 6.10e-08 | 1 |
testis sex cord | 6.10e-08 | 1 |
genital ridge | 6.10e-08 | 1 |
primitive sex cord of indifferent gonad | 6.10e-08 | 1 |
coelomic epithelium | 6.10e-08 | 1 |