FFCP PHASE1:Hg19::chr2:238267881..238267893,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C332 | |||
|description=CAGE_peak_at_chr2:238267881..238267893,- | |||
|id=chr2:238267881..238267893,- | |||
|ontology_enrichment_celltype=CL:0000055!9.65e-25!180;CL:0000057!2.31e-23!75;CL:0000048!7.25e-11!430;CL:0002620!3.06e-10!23;CL:0000723!4.14e-10!436;CL:0000034!1.12e-09!444;CL:0000183!1.91e-08!59;CL:0002320!4.39e-08!365;CL:0000680!4.52e-08!57;CL:0000056!4.52e-08!57;CL:0000355!4.52e-08!57;CL:0000187!2.82e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002570;6.71e-09;8!CL:0000134;2.56e-08;55!CL:0000723;3.57e-08;61!CL:0000048;1.95e-07;58!CL:0002620;2.21e-07;23!CL:0000188;4.04e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.98e-16,76;CL:0000048,6.53e-10,427;CL:0000723,1.88e-09,433;CL:0002320,3.89e-09,361;CL:0000034,7.26e-09,441;CL:0002570,7.39e-09,8;CL:0002620,2.03e-07,23;CL:0000188,2.07e-07,9;CL:0000134,5.81e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.57e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:17;8.12e-08;5!DOID:450;8.12e-08;5!DOID:66;8.12e-08;5!DOID:423;8.12e-08;5!DOID:0080000;8.12e-08;5!DOID:11722;8.12e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.34e-07,5;DOID:450,1.34e-07,5;DOID:66,1.34e-07,5;DOID:423,1.34e-07,5;DOID:0080000,1.34e-07,5;DOID:11722,1.34e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.27e-10!83;UBERON:0002329!1.27e-10!83;UBERON:0003077!1.27e-10!83;UBERON:0003059!1.27e-10!83;UBERON:0007282!1.27e-10!83;UBERON:0009618!1.27e-10!83;UBERON:0007285!1.27e-10!83;UBERON:0003102!2.22e-09!95;UBERON:0004290!3.09e-09!70;UBERON:0002199!5.75e-09!45;UBERON:0002416!5.75e-09!45;UBERON:0002384!1.79e-08!375;UBERON:0002385!4.54e-08!63;UBERON:0001015!4.54e-08!63;UBERON:0000383!4.54e-08!63;UBERON:0001134!5.14e-08!61;UBERON:0002036!5.14e-08!61;UBERON:0003082!5.14e-08!61;UBERON:0000486!1.30e-07!82;UBERON:0005256!1.48e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.55e-09;14!UBERON:0002072;2.65e-08;5!UBERON:0011135;1.51e-07;5!UBERON:0002216;1.51e-07;5!UBERON:0011134;1.51e-07;5!UBERON:0002209;1.51e-07;5!UBERON:0002213;1.51e-07;5!UBERON:0007844;1.51e-07;5!UBERON:0011138;1.51e-07;5!UBERON:0001130;1.51e-07;5!UBERON:0001066;1.51e-07;5!UBERON:0001468;1.51e-07;5!UBERON:0002199;3.56e-07;46!UBERON:0002416;3.56e-07;46!UBERON:0002384;4.42e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,4.40e-10,46;UBERON:0002416,4.40e-10,46;UBERON:0001013,1.15e-09,14;UBERON:0002384,9.27e-09,371;UBERON:0002072,1.47e-08,5;UBERON:0003102,1.83e-08,99;UBERON:0011135,1.80e-07,5;UBERON:0002216,1.80e-07,5;UBERON:0011134,1.80e-07,5;UBERON:0002209,1.80e-07,5;UBERON:0002213,1.80e-07,5;UBERON:0005856,1.80e-07,5;UBERON:0005866,1.80e-07,5;UBERON:0005863,1.80e-07,5;UBERON:0007844,1.80e-07,5;UBERON:0011138,1.80e-07,5;UBERON:0001130,1.80e-07,5;UBERON:0001066,1.80e-07,5;UBERON:0001468,1.80e-07,5 | |||
|phase1_expression=0.908391896352783,3.63970890614671,0.281908808191942,1.0007329835313,1.34088328328186,0,5.06599756336621,1.89515962028049,2.87304191019822,0,0,0,0,1.36142988256051,3.31397375727916,2.01697543935533,1.20538905604795,0,0.487932798790507,0.123121058076788,0.612002073732759,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5045493051169,0.670700859703636,0.12786256184353,0.361439152384566,0,2.02785126545153,0,0.973269740605272,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.529636723252875,6.3104056564739,1.77334191099179,0,0,0.98667019366864,0.622422070799533,0.808264032418128,0.326923806226917,1.21085942115945,8.06646294271999,0.937285727335186,0.936480230490962,0,3.13842229158782,0.352303495931295,0.323745888736263,0.561803226808994,0.61246251376468,1.84251475967652,2.6864703105699,0,3.21447008062124,0.910161361938026,0,0.336672227908132,1.00094815897571,0,1.31693286264251,0.612975591598039,1.65261864797256,0,3.58779271377724,1.70845911054854,1.05965950579781,5.70173082560364,1.03052529238439,1.8034837803194,1.8611685633159,4.89451363499672,0.779496041289589,4.03894038790583,0.460249493211497,0,3.90510551768276,0.604512589365842,1.3564847384839,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,3.85944562915731,0,4.17931135228781,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,4.41026134156626,0,0,0,0,0,0.171567810298526,0,0,0,0,0.977424915930974,3.11980435583874,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0.22001485746285,0.387815147273333,0,1.690605505112,1.32969058292435,1.04007436911366,0.257207374262142,0,0.799266537048298,1.85871391755592,2.71310802695722,4.11620168390384,1.30294473717494,1.42156779497018,0.791951872933429,0,0,0.099972991182057,0,0,0,0.958499421966331,1.14861935834114,0,0.723906533337896,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,2.00068208423871,1.62759014219841,1.45579603071565,1.78428988797162,0.630809660135739,1.40569697991256,0,4.5481500811197,2.0694614258501,0.664225598535437,1.29058417979192,0.521301686808497,0.979005787313703,4.46086450954113,0,0,0,0,0,0,0,0.61384789315225,2.52594084989766,0.384417447767103,0,0.64341568457443,0,2.7757744884478,2.13074070375753,1.06765302817952,4.67328986265259,2.20799719073923,0,0,0,1.49258782613989,6.19109971222838,2.36023946926963,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,1.7400729292582,1.69453478826109,1.07452572308291,0.964856007391714,1.71872391789238,2.90033387828457,1.70453254832202,2.40386496246191,0,0,0,0,0,6.2962469366128,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,11.9822916649498,0.318203247925937,1.56989728039846,0.359744915166629,1.37268514868027,0.824686816419805,0,0,0.421258456238981,0,1.21856744815642,0,1.9109987597118,7.7772987574542,0,0.551365343546124,0.66343897524122,0,0,3.27947376023316,0.202910376962704,0.30982349809975,0,0.717056761020258,0,0.35667105148125,0.354761064070598,1.89996871767898,0.329294892959902,0,0.349934720244983,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0.329607748453519,0,1.19548792950642,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0.31900115973192,0.732780747214898,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4441205797345,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0.277349346026277,0,0,0,1.92199335066233,1.0319161948297,0,0,0,0,0,0.225980740780532,2.32971271899477,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,1.52997326454483,0.288950589901519,0,0,0,0,0,1.67569440763353,0.229160424011684,0,0.798716001995964,0.429226048136571,0,0.201550417460179,3.24269895188163,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,2.1440859791201,0,0,1.62899880526114,0,1.63293680054705,0,0,0.681552087141687,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0.992332043623902,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,2.11739237728355,0,0,3.58211526928498,6.54397267572229,1.10961172300523,5.3032841477025,9.30801236484528,2.66943366478961,0.915360273587694,2.41969478021182,1.86524640699337,1.62640664988597,0.796483835818512,0.449803112163605,0.310525913752519,2.90294345488599,6.91188457850787,2.60872530905867,0.751288044986092,0.380805212168795,0.813741466409323,2.36403256963327,1.18151612746737,1.39210127963548,1.59238355479446,0,1.71697852591396,3.03074539889327,0,0,0,0,0,1.62065732026684,0,0,0,0,0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| |||
|short_description=p@chr2:238267881..238267893,- | |||
}} |
Revision as of 09:25, 21 January 2014
Short description: | p@chr2:238267881..238267893, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:238267881..238267893, - |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.98e-16 | 76 |
multi fate stem cell | 6.53e-10 | 427 |
somatic stem cell | 1.88e-09 | 433 |
connective tissue cell | 3.89e-09 | 361 |
stem cell | 7.26e-09 | 441 |
mesenchymal stem cell of adipose | 7.39e-09 | 8 |
skin fibroblast | 2.03e-07 | 23 |
cell of skeletal muscle | 2.07e-07 | 9 |
mesenchymal cell | 5.81e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
integument | 4.40e-10 | 46 |
integumental system | 4.40e-10 | 46 |
adipose tissue | 1.15e-09 | 14 |
connective tissue | 9.27e-09 | 371 |
hypodermis | 1.47e-08 | 5 |
surface structure | 1.83e-08 | 99 |
intervertebral cartilage | 1.80e-07 | 5 |
symphysis | 1.80e-07 | 5 |
nonsynovial joint | 1.80e-07 | 5 |
fibrous joint | 1.80e-07 | 5 |
cartilaginous joint | 1.80e-07 | 5 |
developing mesenchymal condensation | 1.80e-07 | 5 |
pre-cartilage condensation | 1.80e-07 | 5 |
cartilaginous condensation | 1.80e-07 | 5 |
cartilage element | 1.80e-07 | 5 |
post-cranial axial skeletal system | 1.80e-07 | 5 |
vertebral column | 1.80e-07 | 5 |
intervertebral disk | 1.80e-07 | 5 |
intervertebral joint | 1.80e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.34e-07 | 5 |
myotonic disease | 1.34e-07 | 5 |
muscle tissue disease | 1.34e-07 | 5 |
myopathy | 1.34e-07 | 5 |
muscular disease | 1.34e-07 | 5 |
myotonic dystrophy | 1.34e-07 | 5 |