FFCP PHASE1:Hg19::chr2:238395772..238395830,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:238395772..238395830,- | |||
|id=chr2:238395772..238395830,- | |||
|ontology_enrichment_celltype=CL:0000055!6.32e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000075;2.32e-09;27!CL:0000097;6.38e-08;5!CL:0000148;1.80e-07;10!CL:0000147;2.15e-07;14!CL:0000710;6.70e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000075,2.02e-09,27;CL:0000097,4.53e-08,5;CL:0002028,4.53e-08,5;CL:0000148,1.66e-07,10;CL:0000541,1.66e-07,10;CL:0000147,1.85e-07,14;CL:0000710,6.53e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.65e-07;4!DOID:1612;1.65e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.69e-07,4;DOID:1612,1.69e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000475!5.68e-12!365;UBERON:0000481!8.81e-12!347;UBERON:0002100!1.22e-11!216;UBERON:0000466!1.60e-10!126;UBERON:0000464!2.28e-10!104;UBERON:0003104!5.38e-10!238;UBERON:0009142!5.38e-10!238;UBERON:0004119!8.46e-09!169;UBERON:0000925!8.46e-09!169;UBERON:0006595!8.46e-09!169;UBERON:0005256!1.32e-08!143;UBERON:0000468!9.68e-08!659;UBERON:0001048!1.27e-07!168;UBERON:0000077!2.11e-07!130;UBERON:0002553!3.35e-07!70;UBERON:0000119!5.24e-07!312;UBERON:0001007!6.33e-07!155;UBERON:0001555!6.33e-07!155;UBERON:0007026!6.33e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;8.69e-09;6!UBERON:0003293;8.69e-09;6!UBERON:0003294;8.69e-09;6!UBERON:0010047;8.69e-09;6!UBERON:0003408;8.69e-09;6!UBERON:0000167;8.69e-09;6!UBERON:0007625;2.94e-07;11!UBERON:0002203;3.16e-07;6!UBERON:0001768;3.16e-07;6!UBERON:0002200;3.16e-07;6!UBERON:0001456;3.79e-07;21!UBERON:0001801;9.46e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,6.48e-09,6;UBERON:0003293,6.48e-09,6;UBERON:0003294,6.48e-09,6;UBERON:0010047,6.48e-09,6;UBERON:0000167,6.48e-09,6;UBERON:0002203,2.02e-07,6;UBERON:0001768,2.02e-07,6;UBERON:0002200,2.02e-07,6;UBERON:0007625,2.76e-07,11;UBERON:0001801,5.92e-07,14;UBERON:0001456,9.06e-07,22;UBERON:0002100,9.85e-07,199 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,1.0007329835313,0.893922188854576,0,0,0.631719873426831,0.522371256399677,0.737201809504527,0.697801167972428,0.873765488520689,2.37390280405608,0.866364470720326,0.331397375727916,0,0,0,1.95173119516203,4.18611597461079,8.16002764977012,1.56727360739044,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0.971680998056939,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0.795285947051099,0,3.11964896641424,1.33037638477538,2.19586964232815,0.523916301990851,0,0,0,0.174129737299267,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0,0.560677600142307,0,3.45334567784024,0.311211035399766,0.269421344139376,0,3.02714855289863,0,1.87457145467037,0.624320153660641,0.570471821544449,0.448346041655403,1.17434498643765,0.647491777472526,0.140450806702248,2.65400422631361,3.56219520204127,3.30642499762449,0,0,7.28129089550421,1.43723628363248,0.673344455816265,0.750711119231785,0.554128230968366,0.438977620880838,0,0.751190294532984,0.340296549480063,0.717558542755448,0,0,0.300091096084402,0.412210116953756,1.03056216018252,0.558350568994769,0.506328996723799,0.194874010322397,0.252433774244115,0,0,0.355009592516614,0.201504196455281,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0,0.122988438543114,1.88724591328378,0,0,0,0,0.325808305310325,0,1.44331342025273,1.97081688457631,1.6437217193015,0,0,0,33.9787891122488,33.4809603217,0,0.234004265139238,0.148631162288728,0,0,0,0.268675568108545,0.290633938513962,0,1.97065295158377,6.16339038092582,9.12243708379397,6.3412779503463,6.18587923789262,5.77830838058738,10.6956759156318,12.8939191931052,10.2643467613623,3.70178973731965,6.9078903304101,9.1464458441785,2.13049060256185,2.1798003441664,1.68678057388185,0.258543431515556,10.7296933755565,5.917119267892,1.06375246633948,3.12022310734098,4.62973273671856,1.41849132023278,3.99633268524149,0,0.542621605391443,1.64648067356154,4.56030658011229,0.355391948742546,0,0,0,0,0,0.502257091432126,0,0,0,2.85273810081437,2.31650090668127,4.52047909610843,2.14873155887875,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.10422342547226,2.50085260529839,3.25518028439683,0,0,0.157702415033935,0,0,0,1.03473071292505,0.664225598535437,2.02806085395873,0,10.3774613455252,2.74514739048685,0,0,0,0.909382714338778,3.32870879020994,1.5119514666484,0,0.306923946576125,0.280660094433074,0,0,0,0,0.925258162815933,1.06537035187876,0.574890092096664,0.519254429183621,0.581051892299796,0,0,0.276242966807689,0.803701137152247,0.546273504020151,1.57349297951309,0.451199612907412,0.462092022626489,1.56869953835371,4.38417673959782,1.37217117560738,0,0,1.29549549661284,3.08454505380579,1.35473218771926,2.50844886927427,0.254876273045038,0,2.23874754722178,0.438519753291869,0,0.256450125116389,1.31205858279882,0.325378394664303,0.9273691048295,0,0,0,0,0,0.773365746336976,1.07834031980251,1.38153307253517,0.275673144969061,1.93356440762893,2.75531718437034,0.511359764496605,0,0.165284915360978,0,0.382838137483752,0.4046311234222,0.929691098594572,0.94443704049192,0,0,0,1.73986598415015,0,0,1.48863347743867,0.949138274156178,0.190630193923825,2.04718233049067,0.855877976067841,0.636406495851874,0,1.2591072030832,0,0.353437207037059,0.202182481573316,0,0.842516912477962,2.43816869544795,0,1.05650146756755,0.818999468447914,0.848432591722276,0,0,0,0,2.31510213706675,1.9676842561399,0.202910376962704,0,0.563391205064483,0.573645408816206,0.0982490410131212,0,0.354761064070598,0,0,1.89736586882858,2.79947776195986,0,0,0,0.847294206991012,0.43050537267123,0,1.33029046061003,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,3.40963376167696,0.23874448473769,0.296964680832639,1.84296421259539,0,0,3.45056985571008,0,0,0.996239941255349,0,0,0,0,0.311039587661807,0.718946809178615,2.86433879480975,0,0.690503839458535,0,0,0,0.0927680981618513,0,9.89625492123886,8.1337799996462,1.44999915086959,0,2.03402920234213,0.709163045303809,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0,2.30850775511391,0.113942055847001,0,0,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.619202951523374,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0.19566461893209,2.42780379534093,1.97292201424695,1.20990716048664,0,0.063186579628488,0,0,5.31723098165748,4.30289542638149,8.16225587858786,2.38944859545918,0,0,0.173559738335131,0,0,0,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0.596143835108969,0,0,1.28254112402454,5.76323085796252,0.999048047910651,0.72045208577053,0,6.69220491661662,0.1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| |||
|short_description=p@chr2:238395772..238395830,- | |||
}} |
Revision as of 09:26, 21 January 2014
Short description: | p@chr2:238395772..238395830, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238395772..238395830, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
columnar/cuboidal epithelial cell | 2.02e-09 | 27 |
mast cell | 4.53e-08 | 5 |
basophil mast progenitor cell | 4.53e-08 | 5 |
melanocyte | 1.66e-07 | 10 |
melanoblast | 1.66e-07 | 10 |
pigment cell | 1.85e-07 | 14 |
neurecto-epithelial cell | 6.53e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 6.48e-09 | 6 |
gland of oral region | 6.48e-09 | 6 |
gland of foregut | 6.48e-09 | 6 |
oral gland | 6.48e-09 | 6 |
oral cavity | 6.48e-09 | 6 |
vasculature of eye | 2.02e-07 | 6 |
uvea | 2.02e-07 | 6 |
vasculature of head | 2.02e-07 | 6 |
pigment epithelium of eye | 2.76e-07 | 11 |
anterior segment of eyeball | 5.92e-07 | 14 |
face | 9.06e-07 | 22 |
trunk | 9.85e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.69e-07 | 4 |
breast cancer | 1.69e-07 | 4 |