FFCP PHASE1:Hg19::chr20:61493191..61493209,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10732 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11646 | |||
|TSSclassifier=strong | |||
|UniProt=F8W9A4,Q9UL49,Q86TP4 | |||
|association_with_transcript=-76bp_to_ENST00000217162,ENST00000335351,NM_006602,uc002ydp.2,uc002ydq.2_5end | |||
|description=CAGE_peak_2_at_TCFL5_5end | |||
|id=chr20:61493191..61493209,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002600;2.48e-10;2!CL:0002567;2.63e-07;3!CL:0000307;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,2.99e-10,2;CL:0002567,2.19e-07,3;CL:0000068,3.35e-07,3;CL:0000069,3.35e-07,3;CL:0000307,3.35e-07,3;CL:0000377,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.48e-10;2!UBERON:0009117;2.52e-08;10!UBERON:0005564;2.52e-08;10!CL:0000377;2.63e-07;3!UBERON:0006215;2.63e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.77e-13!57;UBERON:0005068!6.77e-13!57;UBERON:0006241!6.77e-13!57;UBERON:0007135!6.77e-13!57;UBERON:0002616!1.47e-12!59;UBERON:0001017!2.78e-12!82;UBERON:0005743!3.70e-12!86;UBERON:0000955!9.72e-12!69;UBERON:0006238!9.72e-12!69;UBERON:0000073!3.06e-11!94;UBERON:0001016!3.06e-11!94;UBERON:0001893!9.65e-11!34;UBERON:0002780!1.67e-10!41;UBERON:0001890!1.67e-10!41;UBERON:0006240!1.67e-10!41;UBERON:0002791!2.60e-10!33;UBERON:0003080!6.07e-10!42;UBERON:0001869!1.63e-09!32;UBERON:0002020!1.80e-09!34;UBERON:0003528!1.80e-09!34;UBERON:0001950!6.25e-09!20;UBERON:0002619!8.81e-09!22;UBERON:0003075!1.27e-08!86;UBERON:0007284!1.27e-08!86;UBERON:0000956!1.61e-08!25;UBERON:0000203!1.61e-08!25;UBERON:0002346!1.78e-08!90;UBERON:0007023!6.83e-08!115;UBERON:0000033!1.54e-07!123;UBERON:0000153!1.70e-07!129;UBERON:0007811!1.70e-07!129;UBERON:0004121!4.65e-07!169;UBERON:0000924!4.73e-07!173;UBERON:0006601!4.73e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0003126;2.98e-11;7!UBERON:0001005;2.98e-11;7!UBERON:0001873;2.48e-10;2!UBERON:0000473;3.52e-10;8!UBERON:0000991;1.85e-08;21!UBERON:0003135;1.20e-07;11!UBERON:0005383;2.63e-07;3!UBERON:0005382;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.06e-11,7;UBERON:0001005,4.06e-11,7;UBERON:0001873,1.72e-10,2;UBERON:0010122,1.72e-10,2;UBERON:0000473,3.52e-10,8;UBERON:0000991,1.90e-08,21;UBERON:0009196,1.90e-08,21;UBERON:0009117,1.90e-08,21;UBERON:0005564,1.90e-08,21;UBERON:0004176,4.34e-08,22;UBERON:0003135,1.20e-07,11;UBERON:0005383,2.05e-07,3;UBERON:0005382,2.05e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0.522371256399677,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0.612002073732759,0,0.286235987131057,0,0.251085279189606,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0.209658645508376,0,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0.821127996921047,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0.283604451492204,0.443458794925128,0.175669571386252,1.11332214173056,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0.529636723252875,0.286836620748814,0,0,0,0,0.622422070799533,0,0.163461903113459,0.454072282934794,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0.204154171254893,0,0,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0,0,0,0,0.300476117813194,0.453728732640084,0.358779271377724,0.427114777637135,0,0,0.103052529238439,0,0.18611685633159,0.506328996723799,0.0974370051611986,0.252433774244115,0.644349290496095,0.161646056818812,0.355009592516614,0,0,0,0,0.286804595389004,0.365921118388786,0.265059536642971,0.348581828608555,0.621966330092223,0,0.72995471815166,0,0,0,0.928735856063958,0.721879481669586,0,0.505754070234305,0.964044119533928,0.441175890929576,0.435758888184812,0.474541238222193,0.539325232640658,0.392442930250692,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0.301586917234893,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0.16798212819886,0.283550194484773,0.179117045405697,0.290633938513962,0,0,0.176096868026452,0,0.144119953416961,0,0.190493682876507,0.381988425558278,0,1.71072446022705,0,0.300343057843917,0,0.112131084345361,0,0.22001485746285,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0.823240336780769,0.325736184293735,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.410952645100767,0.358121926479791,0,0.197030760201927,0,0,0.508189248444927,0,0,0.502548796003046,1.27587750330633,0,0,0,0,0.500170521059677,0.542530047399471,0,0.178428988797162,0.473107245101804,0,0.300946099727719,0,0,0,0.368738337083406,0.0868836144680828,0.391602314925481,0.686286847621712,0,0,0,0.303127571446259,0,0.604780586659361,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0,0.355123450626254,0.328508624055237,0,0.232420756919918,0.120859449591622,0,0.460404944679482,0.459257792658427,0.364182336013434,0.131124414959424,0.451199612907412,0.15403067420883,0,0,0,0,0.340187410553031,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0,0,0.328014645699706,0,0.103041011647722,0,0.165018999841176,0.574265537996172,0,0,0.096670718292122,0,0,0,0.322260734604821,0.145016693914229,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.255225424989168,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,1.15755106853338,0,0,0,0,0.430234056612155,0.0982490410131212,0,0,0.633322905892992,0,0,0,0.0962221127255121,0.670302275535787,1.08890984861323,0,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0,0.648473311192717,0,0,0.213648142254946,0,0,0,0.28853842595289,0.284567373393656,0,0,0.191505370132367,0,0,0,0.456469358066384,0.313359791546046,0,0,0,0.605399121573143,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0.270455678475983,0.66614393599564,0,0,0,0.728163130497081,0.222886768554957,0.284136146806413,0,0.296964680832639,0.307160702099232,0.994147647766298,0.562677665642051,0.333926115068718,0.16480387422676,0,0.398495976502139,0,0.251932747854276,0,0,0,0,0,0,0.197286811273867,0,0,0,0.463840490809256,0,0.520855522170466,0.0874599999961957,0,0.227586896570999,0,0.472775363535873,0.344743373241465,0.291604613383254,0.347249989866585,1.77148277162768,0.361789315876224,1.52581736317083,0.442317039724898,0.886642856860642,0.87754158861589,0.21787692703798,0.557694977114413,0.230850775511391,0.227884111694002,0.23056390438806,0,0.108647371922008,0,0.0915975934018623,0,0,0,0.166211681900156,0.451191321234361,0.392125068635479,0,0.189753732724185,0,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0,0,0.296521128680622,0.123563938946503,0.417687798021821,0.808813595768125,0,0.468528891450678,0.182454789215666,0.19566461893209,0.242780379534093,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0.174118413160805,0.349453336484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| |||
|short_description=p2@TCFL5 | |||
}} |
Revision as of 12:42, 21 January 2014
Short description: | p2@TCFL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TCFL5_5end |
Coexpression cluster: | NA |
Association with transcript: | -76bp_to_ENST00000217162, ENST00000335351, NM_006602, uc002ydp.2, uc002ydq.2_5end |
EntrezGene: | TCFL5 |
HGNC: | 11646 |
UniProt: | F8W9A4Q9UL49Q86TP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 2.99e-10 | 2 |
light melanocyte | 2.19e-07 | 3 |
duct epithelial cell | 3.35e-07 | 3 |
branched duct epithelial cell | 3.35e-07 | 3 |
tracheal epithelial cell | 3.35e-07 | 3 |
tracheoblast | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 4.06e-11 | 7 |
respiratory airway | 4.06e-11 | 7 |
caudate nucleus | 1.72e-10 | 2 |
future caudate nucleus | 1.72e-10 | 2 |
testis | 3.52e-10 | 8 |
gonad | 1.90e-08 | 21 |
indifferent external genitalia | 1.90e-08 | 21 |
indifferent gonad | 1.90e-08 | 21 |
gonad primordium | 1.90e-08 | 21 |
external genitalia | 4.34e-08 | 22 |
male reproductive organ | 1.20e-07 | 11 |
caudate-putamen | 2.05e-07 | 3 |
dorsal striatum | 2.05e-07 | 3 |