FFCP PHASE1:Hg19::chr22:24551930..24552005,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23523 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24187 | |||
|TSSclassifier=strong | |||
|UniProt=F5H085 | |||
|association_with_transcript=0bp_to_ENST00000403176,uc002zzm.1_5end | |||
|description=CAGE_peak_4_at_CABIN1_5end | |||
|id=chr22:24551930..24552005,+ | |||
|ontology_enrichment_celltype=CL:0000057!7.21e-16!75;CL:0000055!1.84e-15!180;CL:0000048!1.83e-08!430;CL:0000723!1.84e-07!436;CL:0000680!4.13e-07!57;CL:0000056!4.13e-07!57;CL:0000355!4.13e-07!57;CL:0000183!7.38e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000057;5.26e-07;73!CL:0002620;7.65e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.57e-15,76;CL:0000680,2.06e-07,58;CL:0000056,2.06e-07,58;CL:0000355,2.06e-07,58;CL:0000187,5.75e-07,55;CL:0000048,5.96e-07,427;CL:0002620,5.97e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.67e-12!115;UBERON:0000914!1.08e-09!83;UBERON:0002329!1.08e-09!83;UBERON:0003077!1.08e-09!83;UBERON:0003059!1.08e-09!83;UBERON:0007282!1.08e-09!83;UBERON:0009618!1.08e-09!83;UBERON:0007285!1.08e-09!83;UBERON:0001009!1.31e-08!113;UBERON:0004290!1.44e-08!70;UBERON:0002385!4.95e-08!63;UBERON:0001015!4.95e-08!63;UBERON:0000383!4.95e-08!63;UBERON:0004535!6.41e-08!110;UBERON:0001134!1.45e-07!61;UBERON:0002036!1.45e-07!61;UBERON:0003082!1.45e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.22e-11,114;UBERON:0007524,2.10e-09,73;UBERON:0003077,3.47e-09,72;UBERON:0007285,3.47e-09,72;UBERON:0002329,5.94e-09,71;UBERON:0003059,5.94e-09,71;UBERON:0007282,5.94e-09,71;UBERON:0004290,5.94e-09,71;UBERON:0009618,5.94e-09,71;UBERON:0007503,2.30e-08,78;UBERON:0002385,2.99e-08,64;UBERON:0001015,2.99e-08,64;UBERON:0000383,2.99e-08,64;UBERON:0001009,3.42e-08,112;UBERON:0001134,9.25e-08,62;UBERON:0002036,9.25e-08,62;UBERON:0003082,9.25e-08,62;UBERON:0004535,1.72e-07,109 | |||
|phase1_expression=3.99692434395225,7.70761886007539,1.9733616573436,9.00659685178174,0.893922188854576,5.23403114460221,0,1.26343974685366,3.13422753839806,1.72013755551056,0.697801167972428,0.218441372130172,0,3.7129905888014,2.31978163009541,4.03395087871065,3.61616716814386,2.19093027116212,0.975865597581014,5.41732655537867,6.73202281106035,5.32873026512749,0,0.958120975510189,1.38096903554283,1.06978768047132,1.23150884174919,1.96776953284198,2.75354993794233,1.53531759238885,4.4896675761662,0,0.90361775633475,0,0.697204805222715,1.13735385989937,1.46800219667424,5.53995408531877,5.61524452916397,4.12320654360118,1.79132379391939,3.88672399222775,1.80302897343931,1.01778767145695,1.51150377475524,1.94067248950253,0.697287110717054,0.822335776043652,0.309706370895104,0,0.768482119587302,1.41889337933151,0.689491361473237,1.29096936716765,0,0.188242339542605,0.818718450173537,0.449446968890169,0.306083892370903,0.320929027076094,0,0,0.797854630486527,0.852449501065388,0,1.13477044938228,0.622822248995575,0.251248665256743,2.08593167368081,1.52032191293582,1.21079900526674,1.47311054395026,0,2.5350634357433,1.4882300997553,1.88692780957538,6.73971786878971,6.60778328502628,4.17886525412408,1.71007646244749,2.78483348078726,1.64397738388171,1.75996244461323,2.18455444504853,2.66852776159066,0.853460445133014,1.60158394814405,0.574752439954483,2.64417949113945,2.86216126360609,2.27685187643779,1.76171156811282,2.6759125968766,0,1.12101712596307,0.263384084775077,0.393419540227666,0.786021525498329,2.05601498999509,3.17654341242288,1.30368906653436,1.89379122293893,5.84480185223734,3.00808233589969,2.3568472597987,3.32300841875432,1.62482318259009,2.0494611156108,1.69077151827842,4.93313713811028,4.14525026678773,3.47763702882063,1.4828656316206,2.1403266247177,2.09071047609954,1.69964014046349,1.91610246800961,1.71813722741315,2.78321661221453,1.27426165729639,0.651083453856419,3.8018081777935,2.40920190524436,2.43174561193395,3.74792179657038,1.4206635122641,4.10563998460523,0.80642697289893,2.67440195783507,1.44824403882799,0,4.69490601792545,1.15076305659177,2.89151321907653,3.00802746381534,4.49024208778554,1.5905718941022,0.973269740605272,0.945348171640679,0.886917589850256,0.614843499851882,4.25681995367566,0,0.370784442784429,0,0.870648686496336,0.664789802594326,0,1.71598473234038,0.371457501329565,3.7764857399674,2.58070378531837,2.42998351125316,2.26123176769604,2.51699661725944,4.12677062910101,1.04497483268405,0.516833518338658,0.71153252537342,1.33888245105868,0.805658634218294,0,5.12530320851156,1.83831540172934,0.81014194788176,2.58969212023831,1.12264686313085,3.0405099730497,0,3.79706263827252,4.21364011039937,9.22462922052443,15.511210565933,0.436094052142534,0.496971951695318,3.03913227994991,0.926864265692532,3.15520282823695,4.61068896857864,1.12135520028461,3.20246987189115,4.68668341992604,4.66816553099649,2.15537075311501,4.57693328717684,2.11900398702904,0.576175924479999,3.04617861383936,3.74592092196385,5.13424639390004,7.17353666648645,2.58355897016283,3.56120477609889,3.08991774744947,8.57447519270552,7.61572767332961,8.369388275237,5.94001428641027,5.68713937340681,16.3829045148845,21.5585442544872,6.90178067211671,7.88246675193374,8.86605169549385,7.02364193409341,3.67785354958824,4.95785594391769,2.04177929688038,6.63741652048789,1.92201649936711,4.23863802319124,3.90118424909723,4.63736381572975,6.69865404118636,4.46680455195816,5.56961896396179,3.70260619612555,5.04867548488229,4.32634523618807,10.8302858068604,3.19508633264953,1.91428986632517,5.76506013855658,0,0.272746120590835,0,0.853815942907168,0.530119073285941,0.464775771478074,0.310983165046111,0.504641701751257,0,0,1.28648187638577,13.8134921352481,16.2528774811193,7.94067429836544,0.354920400119532,1.34867752062481,0.482022059766964,0.220587945464788,1.08939722046203,0.237270619111097,0.269662616320329,0.392442930250692,0,0.738155454624648,4.20725321410337,8.231480226628,24.9914809355421,0,0,4.13552934676983,0,0.368965315629341,2.05881372358231,0,0,0.100528972411631,0.370353780634118,2.28065813717227,7.27954349695705,0,0.231860809950154,1.40890433082986,0.288732895522148,2.77791307545966,1.14152491340759,0,1.71697232418975,0.246217006087397,1.40402559083543,0.297262324577456,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0.766765358330422,0,0.968532774145487,0.414656231081544,1.15295962733569,2.5248486685276,1.96843472305724,1.90994212779139,2.34434894420094,0,0.925447434329912,4.20480280981484,2.00078502841405,4.48524337381443,2.61576041299968,1.98013371716565,3.10252117818667,121.60319158964,2.535908257668,18.0837919277712,20.8014873822732,6.43018435655355,5.67396528093113,6.92697665441858,3.0025378668211,0.542621605391443,3.29296134712308,1.62868092146868,2.13235169245527,0,0,0,0.399891964728228,1.2162378064119,0,2.10833939483032,1.67737398844108,4.59447743336456,2.85273810081437,2.31650090668127,4.9314317412092,2.68591444859843,1.12085143993527,1.18218456121156,1.94064817373566,1.54011643535698,2.54094624222463,3.90419561572865,0.773288812777695,0.167516265334349,0.637938751653163,19.4741826226267,32.9077605124427,18.2342825911856,4.17151071845076,6.5022167737758,1.89885516589815,16.6376689224646,3.92543775353756,2.36553622550902,6.2084949946138,5.41702979509894,0,8.27784570340039,1.32845119707087,2.39679919104214,3.90976265106373,2.54541504701563,2.40200396667599,2.27444828735176,3.45142721309787,3.842192080924,0,0,0.907170879989041,2.72918588600655,3.22270143904931,5.05188169979532,2.56278298511402,4.09365799253363,1.93024705372329,7.42090332224955,5.24312958929029,4.26148140751505,4.5169935807595,4.15403543346897,6.15915005837784,0,0,0,1.37777337797528,6.19109971222838,5.63834984325524,0.451199612907412,0.308061348417659,3.13739907670742,2.92278449306521,0.211103257785751,2.27466768141793,2.38131187387122,0.647747748306418,3.08454505380579,1.35473218771926,2.50844886927427,0.509752546090077,1.66215201785745,0.671624264166535,0,0,0.256450125116389,1.96808787419823,0.325378394664303,5.04900957073839,1.28197250745681,1.73269949833235,0.574265537996172,0,1.6068392984416,0.870036464629098,2.7728751080636,2.45605879561807,3.03240459465967,4.0819693049944,8.1209348591968,3.66474497889234,3.29418531892928,0,0,0.127612712494584,0.10115778085555,1.85938219718914,0,2.0911118104818,6.46870518369786,4.7907542728532,4.34966496037536,2.22389062924704,0.143124886741991,0.744316738719335,2.21465597303108,3.62197368455267,13.3066851481894,4.2793898803392,5.40945521474092,4.70969184119538,8.45400550641579,4.11805544604082,4.83030849617314,3.43710218674637,3.17020642346017,2.10629228119491,20.4806170417628,2.68084838594413,1.05650146756755,4.23149725364756,1.97967604735198,7.910568163417,6.06501877900737,3.3171948762061,2.63070531152258,13.3118372881338,17.7091583052591,2.43492452355245,1.8589409885985,3.3803472303869,1.00387946542836,1.67023369722306,2.1400263088875,3.54761064070598,5.48879851773927,2.30506425071931,14.7994537768629,9.09830272636956,0.192444225451024,1.34060455107157,1.08890984861323,3.10674542563371,0,0,0.443430153536676,0.229723400206959,10.6563997938756,14.5281069357051,17.659062802399,14.0556747520096,18.5113022888787,9.72709966789076,11.8806916192385,15.0693783495911,0,0,0,0.185803175125719,0.721346064882224,0.0711418433484141,0.318852545457645,0.798317485731266,2.10655907145603,3.38677732358213,0.649243880549111,0.842391534340376,1.36940807419915,1.25343916618419,2.50634477090067,2.70866844482565,1.4452926759333,1.61439765752838,0.851692475380653,2.74804275804612,0.921722292925374,1.56573275524691,1.50164227540718,0.586164286206121,0.278406173895242,0,0.540911356951966,1.99843180798692,0,0,6.73937624650712,0,1.00299045849731,0,0,0,0,0.994147647766298,2.39138007897872,0.445234820091624,0.16480387422676,1.05562704063997,18.3308149190984,6.07824614168525,0,1.02268682502155,0.246169610922139,1.86623752597084,1.70749867179921,0,1.02314474045374,8.38468947913936,2.3948309234694,11.1136990144637,0,3.52518773015035,0,0,7.25917999968424,8.69999490521752,0,0.254253650292766,0,0,0,0.520874984799877,2.65722415744152,1.32656082487949,21.3614430843917,44.3422832324211,29.5547618953547,3.07139556015562,0,0,12.2350911021037,0.341826167541004,0,1.16684937732704,0,0.31900115973192,6.13703875792477,1.06606955203727,1.02193298195737,1.09886179476517,2.99181027420282,0,0,0,0,1.11255605286265,0,0,0,0,4.97630965539252,5.57282656371037,4.888241159469,0,0.247127877893006,0,2.89824871816911,5.61804353109152,0.937057782901357,0.729819156862664,0,0,2.36750641709634,4.83962864194656,0,8.78293456835983,0,0,1.32930774541437,0.330991955875499,0.313932918407225,1.19472429772959,0,2.77349346026277,0,0,0.957651272384428,5.41652671550293,0,0.870806981601766,0.292357268344742,0.656923656425674,5.43138492335149,2.02989091390451,2.71176888936639,0.959293472527256,0.993573058514948,2.9756074099263,0.391102765469606,0,10.886102731707,0.799238438328521,0,0.229073192331831,0,0,0,0.235694034616795,0.815425236441684,0.627617077873999,6.73188236399724,1.15580235960608,1.20084057741958,1.77976992559591,1.27746588066972,2.57859264851974,0.262887354279314,8.09918963689537,7.10397314436219,0,3.39454300848285,8.15529491459485,4.24025769139558,8.59948447830096,0.720599767084807,0,0.945398187686684,0.412079291905832,0.337017719270924,0.78741985211799,0.931406652723629,0,1.90684768556206,0,0.275078873194468,0,2.249738915515,9.2856234546954,3.9487211827716,0,1.81253126788156,4.40618540333984,0,0,0.959575986597226,14.2939065274673,7.28301167401975,0,1.62899880526114,1.72844298240254,2.28611152076586,0,0.082092520749339,0.340776043570843,2.94611437952327,0.439656701034247,0,0.517131825446202,3.04134984008187,0,1.40963004463334,6.83439440433246,5.03053776318931,6.62782488555513,3.96932817449561,2.37133958277533,0.487170393523584,0,2.1760712134779,0.2506898940227,2.14441903734423,1.31149052283922,0,2.65820453990096,1.09823638411767,2.50381861413,1.72022758707021,4.21530395840039,3.84997698236577,0,0.999843263696853,0.606596470166591,0.285465333544967,2.11739237728355,1.40500471742064,0,1.94031243752936,1.8697064787778,2.77402930751307,6.43970217935303,3.77351852628863,5.33886732957922,0.686520205190771,4.83938956042365,3.10874401165561,1.47855149989634,1.59296767163702,0.449803112163605,0.155262956876259,1.24411862352257,2.12673371646396,3.65221543268214,1.6528336989694,2.28483127301277,0.813741466409323,1.27294061441792,1.28892668450986,1.39210127963548,3.98095888698616,2.40016658797892,5.15093557774189,4.71449284272287,3.78554694685953,0.192619830407303,2.35885750512418,0.260994291965212,1.13352962756136,1.15761237161917,1.46842022703881,1.25362188757041,0,1.09642024789354,1.23682402162117,0.578742114812744,1.68942440653073,0.76872455576384,3.10887307558079,2.12701969324168,1.24432592536558,0.584580926518165,0.265729680626726,0.490696182767533,0,0.737318726261158,0,0,0.853533837553127,0.172214979660816,2.27006381426734,2.02516545277025,0,0,0,1.40172254815686,0,0.218419276384028,0.33946505990805,0,0.123935764259002,0,2.54403480522735,0.23658523500376,0,3.87943538059752,17.7622376864856,2.50493977876192,1.41696576325585,0.798169295285756,1.8460472781668,0,4.28774965278151,4.03689114079628,0,0.0981477185010256,0,0,0,0.381382095467167,0,4.57507310867432,8.34834644676756,0.20170506870352,2.34454203369928,0,0.818859587550484,0,2.4988906308806,0.781078098613847,1.44680757550829,2.72687983833799,1.64092442705466,0.548257766857182,13.3977018165109,0,0.638812138197976,0,0.672567444437648,0.606965604236632,0,3.193285325855,0.345701962667338,3.77273620762321,1.97112225632812,4.34100305514804,1.65471377237555,0,7.2998576350978,0.314231179832004,1.12108865325516,8.21842848458546,2.37520350340484,0,3.64530375300947,0,0,0.347716544605159,2.40513409419076,1.03608082081518,2.3900586793153,2.07377898544228,1.72090943528111,0.354996002191696,0.340853619036631,3.38709640152743,0.22910686854405,0.31020638566432,0,0,0,0,0.647428837187895,2.25858175083743,9.27851545070559,5.82853191670967,0.233939463462106,0,0.237840181555137,0,0,1.05673990496671,2.46957305945423,3.71551252856727,0.470317296361523,9.56078454840231,0,0.588925401344836,1.78227840196252,6.7624916413344,3.22861517906852,2.6315497034359,5.0921731499126,1.49911733887393,0,0,0.320965466756673,2.19100916473955,3.66983426723633,1.86341458096887,0.473314686579554,5.16735325450952,0.436350690340377,5.290268405154,13.7638156721698,9.24351257262837,9.95041092884715,0.126166424835079,0,0,0,0,0.275684698604535,0,3.86471360913021,1.87574891109325,2.48750831837634,0.827463966895162,4.69114760182158,5.95161078659351,0.839655827868079,0.744896571550295,0.672791175483681,1.2729431655633,2.02117188958219,4.35433495793923,5.13349951627922,2.02056159043763,3.9447212965972,4.32458463509817,0.0814032686109745,0.426909383510862,0,0.538951212639521,7.03922827210363,9.65707409044645,6.91723503136755,3.99454064511308,5.63566622054873,0.641136984606466 | |||
|short_description=p4@CABIN1 | |||
}} |
Revision as of 14:54, 21 January 2014
Short description: | p4@CABIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CABIN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000403176, uc002zzm.1_5end |
EntrezGene: | CABIN1 |
HGNC: | 24187 |
UniProt: | F5H085 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.57e-15 | 76 |
muscle precursor cell | 2.06e-07 | 58 |
myoblast | 2.06e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.06e-07 | 58 |
muscle cell | 5.75e-07 | 55 |
multi fate stem cell | 5.96e-07 | 427 |
skin fibroblast | 5.97e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.22e-11 | 114 |
dense mesenchyme tissue | 2.10e-09 | 73 |
paraxial mesoderm | 3.47e-09 | 72 |
presumptive paraxial mesoderm | 3.47e-09 | 72 |
somite | 5.94e-09 | 71 |
presomitic mesoderm | 5.94e-09 | 71 |
presumptive segmental plate | 5.94e-09 | 71 |
dermomyotome | 5.94e-09 | 71 |
trunk paraxial mesoderm | 5.94e-09 | 71 |
epithelial vesicle | 2.30e-08 | 78 |
muscle tissue | 2.99e-08 | 64 |
musculature | 2.99e-08 | 64 |
musculature of body | 2.99e-08 | 64 |
circulatory system | 3.42e-08 | 112 |
skeletal muscle tissue | 9.25e-08 | 62 |
striated muscle tissue | 9.25e-08 | 62 |
myotome | 9.25e-08 | 62 |
cardiovascular system | 1.72e-07 | 109 |