FFCP PHASE1:Hg19::chr3:48647059..48647102,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7384 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12585 | |||
|TSSclassifier=strong | |||
|UniProt=F8WEF1,F8WER5,P31930 | |||
|association_with_transcript=0bp_to_ENST00000412343,ENST00000415995,ENST00000463708,ENST00000467690,NM_003365,uc003cub.1,uc003cuc.1,uc003cud.1_5end | |||
|coexpression_cluster_id=C3540 | |||
|description=CAGE_peak_1_at_UQCRC1_5end | |||
|id=chr3:48647059..48647102,- | |||
|ontology_enrichment_celltype=CL:0002321!1.29e-14!248;CL:0000220!2.07e-14!246;CL:0000066!3.20e-14!254;CL:0000183!2.03e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1000449;7.35e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.91e-15,250;CL:0000066,3.16e-14,253;CL:1000449,7.41e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!4.68e-16!347;UBERON:0003104!8.82e-15!238;UBERON:0009142!8.82e-15!238;UBERON:0005256!2.21e-11!143;UBERON:0000119!2.34e-10!312;UBERON:0000483!2.59e-10!309;UBERON:0000486!3.91e-10!82;UBERON:0000475!1.25e-09!365;UBERON:0004290!1.71e-09!70;UBERON:0000914!1.80e-09!83;UBERON:0002329!1.80e-09!83;UBERON:0003077!1.80e-09!83;UBERON:0003059!1.80e-09!83;UBERON:0007282!1.80e-09!83;UBERON:0009618!1.80e-09!83;UBERON:0007285!1.80e-09!83;UBERON:0000922!2.86e-09!612;UBERON:0002100!3.98e-09!216;UBERON:0000923!1.10e-08!604;UBERON:0005291!1.10e-08!604;UBERON:0006598!1.10e-08!604;UBERON:0002532!1.10e-08!604;UBERON:0002050!1.36e-08!605;UBERON:0005423!1.36e-08!605;UBERON:0000064!3.79e-08!219;UBERON:0003914!5.07e-08!118;UBERON:0000468!1.53e-07!659;UBERON:0000490!1.64e-07!138;UBERON:0004119!2.99e-07!169;UBERON:0000925!2.99e-07!169;UBERON:0006595!2.99e-07!169;UBERON:0001134!7.06e-07!61;UBERON:0002036!7.06e-07!61;UBERON:0003082!7.06e-07!61;UBERON:0002385!8.08e-07!63;UBERON:0001015!8.08e-07!63;UBERON:0000383!8.08e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;7.35e-07;15!UBERON:0004819;7.35e-07;15!UBERON:0001285;7.35e-07;15!UBERON:0007684;7.35e-07;15!UBERON:0000353;8.24e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,6.05e-12,78;UBERON:0000119,3.45e-11,309;UBERON:0000483,3.80e-11,306;UBERON:0003104,6.80e-11,160;UBERON:0009142,6.80e-11,160;UBERON:0000486,4.49e-10,83;UBERON:0000490,1.17e-09,148;UBERON:0000922,1.45e-09,592;UBERON:0002329,2.00e-09,71;UBERON:0003059,2.00e-09,71;UBERON:0007282,2.00e-09,71;UBERON:0004290,2.00e-09,71;UBERON:0009618,2.00e-09,71;UBERON:0003077,2.34e-09,72;UBERON:0007285,2.34e-09,72;UBERON:0007524,2.36e-09,73;UBERON:0005256,3.18e-09,122;UBERON:0002100,6.69e-09,199;UBERON:0003914,4.81e-08,117;UBERON:0005423,4.81e-08,581;UBERON:0004211,7.41e-07,15;UBERON:0009773,7.41e-07,15;UBERON:0001231,7.41e-07,15;UBERON:0001285,7.41e-07,15;UBERON:0007684,7.41e-07,15;UBERON:0004208,7.41e-07,15;UBERON:0001134,7.93e-07,62;UBERON:0002036,7.93e-07,62;UBERON:0003082,7.93e-07,62;UBERON:0000353,8.37e-07,15;UBERON:0002385,9.02e-07,64;UBERON:0001015,9.02e-07,64;UBERON:0000383,9.02e-07,64 | |||
|phase1_expression=129.355006040636,274.690972152131,119.106471461096,230.1685862122,251.192135068136,149.169887621163,395.147809942564,205.30895886372,271.894238956032,259.740770882095,845.03721441461,317.61375507727,332.346392567851,178.718613674307,218.059473228969,150.600832805198,166.343689734618,174.544111602582,203.955909894432,265.572122271632,356.185206912466,314.395085642522,149.987657256674,230.907155097956,229.4919451793,161.308699533925,158.700439406745,161.435812474356,121.549561546311,93.6543731357199,89.7933515233241,864.255951010192,932.232318618684,952.486330189645,113.334514448981,152.405417226516,116.559374415934,121.324994468481,112.505435030749,119.138968023003,128.079651265237,115.306145102757,108.954465109261,150.632575375629,134.145960009527,156.709303527329,134.576412368391,133.218395719072,117.688420940139,129.173884152646,120.395532068677,95.775303104877,97.9077733291997,76.1671926628915,89.3814811522656,139.864058280155,140.546667279791,132.13740885371,123.963976410216,94.9949920145237,122.752728153416,127.982304472446,126.459958932115,117.638031147024,116.083695451434,126.526905106124,102.76567108427,122.609348645291,124.112934584008,93.174014378495,118.052903013507,88.7549102730031,88.6094684834476,159.708996451828,139.681025077034,184.918925338388,126.032724146367,120.59204495173,96.9175287783393,155.616958082722,129.295840179409,171.156312077462,75.6783851183688,70.451880852815,73.829268070675,60.595691604444,64.063357925762,73.5683123141739,66.1044872784862,55.3351177630511,71.1516211386811,60.4854305052067,65.3687220094141,68.7290908610935,68.3820446837474,104.300097570931,46.4235057468646,78.2091417870838,66.8204871748405,63.363681753067,49.8661067949393,58.7075279111069,66.2410876586898,66.9576845879893,68.0539646266874,61.8079565888303,62.5556925297186,98.8864988282212,104.957893480822,105.898010564767,111.645407185483,72.1609683480281,43.4479630064837,43.8766958067129,67.9480904732349,69.6852457590032,55.5669715722786,63.9147048597692,48.0737414837055,61.8016903788748,69.6659295626368,70.3334512891797,57.5196954877092,54.0103499071646,61.2160560106495,62.7459717916645,77.1860317105784,51.0065060358573,67.3949293374438,63.7227377084316,119.465364493841,284.377164514342,112.391191860463,177.828062973207,193.015095594817,165.2698781343,138.379754786891,173.242013827738,156.360587589368,207.095257230035,171.189997315903,154.03139278531,646.988432007555,559.513724161704,318.05644578159,324.577830325834,348.083940638389,58.1917123305034,69.7833791151756,67.9767227433104,201.545081069839,270.973897458429,182.248763343987,242.5171070854,227.368694425769,227.522620684436,230.103458157028,108.793455610287,82.1820066806301,57.9066660082879,201.817487871683,205.273468543998,189.148094599831,124.270121156904,282.739539810734,102.426788341839,184.787673671338,157.881295637618,271.370448314613,240.164211870737,241.459898500277,18.4492584410489,19.3890132074163,593.960099018132,115.794464745009,96.3658193767452,86.3307858902187,84.0431298794024,124.488602151623,218.6642640555,288.222288470203,258.014255644349,79.0476029915406,144.409840458706,142.211855708709,198.88365992544,268.497980807679,300.400075610927,274.076547457021,314.900445492536,262.730780410066,224.88706490281,225.327138560439,229.917970571581,177.001666477992,243.948954181171,166.251181911807,141.372340016564,163.937974111683,230.270824570321,477.162446165982,216.143570317021,178.168772297677,101.405466267211,182.614690286429,209.33116453073,169.017816269921,129.879849718224,113.733029026738,114.039645629115,120.80118366095,161.749100789493,119.128723799635,150.719715926693,143.868329944319,99.9155886868296,113.80642202828,149.188360578272,111.656527053109,82.2778429207753,141.648827414129,118.988228006843,189.738302795436,237.517588537692,214.378450784396,184.415354835129,193.084376803149,204.758492056695,208.684321393655,178.193353571422,221.285386217926,193.802977669266,422.413737290503,333.198805983915,508.336510577128,225.682813023542,311.851936081261,264.060777688932,271.421351025744,288.972224830295,255.109958930027,271.042028450953,274.047565073317,299.999660656366,298.452848455651,316.262163009933,229.566346388266,350.604434508615,212.783763858334,327.829426389759,466.458528144338,352.834970787268,219.183055378801,158.926715789274,147.217160936107,117.352382244191,233.438857064147,605.845450058569,254.639887118661,235.267239147824,328.740580058118,513.727783928112,196.290625154372,126.943793447709,103.554468315995,139.169255641675,183.342262980338,117.386811928747,220.467027030638,234.3667222519,146.991552634176,284.783190674452,237.512597337388,269.953441881918,137.241398738468,200.611762597977,293.931071510748,254.014062261203,620.313174889312,41.8763752211552,74.8411689112421,50.3807320764076,50.5861036493535,45.4472760334968,150.680503155317,351.429351513615,527.478512445211,443.077635198807,176.04066750809,232.765869829036,128.62189468376,197.238577363489,176.563827877478,144.623099638913,111.69076241472,9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593934,220.972694930186,166.336163277639,54.8070546754217,167.451728918375,160.887219535286,232.893524915904,119.657404356611,162.307647669887,103.084242843472,139.811711554276,180.428077452664,174.925766425085,167.567040190735,128.353058400749,161.91759293868,153.079123816613,310.40904359032,171.239299652754,129.184515195732,161.973169606479,69.6370921662661,190.933651809713,94.8754275721512,76.6479528401834,201.55999202596,206.629460463541,263.363304399736,457.404206327321,142.856731890786,504.189476259953,1150.32580900601,787.79524476981,268.062055222038,140.87725446508,245.806453502928,179.546872478163,179.336907837418,177.136513248798,149.609771902418,241.149649723354,170.974383309,99.7008932736733,235.181856204323,207.684549261823,223.506901859702,71.5416975133771,92.856234546954,132.980779524416,304.239261652534,226.487602777896,148.866121127125,63.3602019116439,152.932100450917,226.268017639626,781.876687052463,1129.52890144343,236.469740018917,144.437894066488,154.695646925027,124.429784201685,178.397985428106,125.026909101243,113.819198552662,179.486352967879,261.742289349055,336.567497837042,163.413656841,117.422550347509,169.204882667602,179.727830690751,87.1385286552389,59.8948402429727,90.3041140656886,114.614351038561,149.98722861054,92.6841673678618,130.859957842887,133.284361825521,176.987065180026,180.437544713679,182.297182674651,108.053218220161,213.542431372044,175.229716399219,129.948186073347,222.482767927748,116.919220319842,105.50178859741,116.35120198137,241.587128590752,298.597112439505,187.550724139044,206.328123875297,198.105665156311,174.919681533266,182.986388339308,182.062668370988,189.188798772391,147.166135098744,129.557469402576,111.226402699567,119.912195839988,114.330578365009,79.4284094978008,146.820163939706,148.305290229407,108.852353143592,175.136615356421,148.050116199185,149.137201867035,190.436947561283,137.936485059447,107.3870698316,116.365029696533,218.218391043071,152.952633228504,133.641722845006,150.082150039378,265.618435736334,149.720527459698,140.761286304154,46.6884123446009,236.151912079354,76.9845313035983,141.980894829075,172.523209314839,205.360434725241,203.376201444875,240.695402413519,125.682188994516,148.016733465627,138.524290421571,172.079322137656,112.17778059364,472.509360276174,308.123864824229,189.000892742332,129.824671546475,70.9291524175374,109.613493258525,77.8571276657818,228.999284343642,379.227598206989,185.954668555592,218.986198461148,150.862105787515,56.4865133287475,130.528669320372,127.03310567377,194.852154253186,196.576414170419,88.119221828216,148.690414916024,129.744402031115,116.417474312687,142.405592631427,137.535973305789,172.146776555754,185.470112767117,185.07853208029,136.825127577175,292.208323124196,179.512055338558,262.452374091693,110.47426716591,216.795761778145,113.18040607152,236.704284333831,141.160149884162,203.598951254657,167.934671457125,151.335585474704,160.078928875173,165.51152185688,216.078889058538,182.646078183685,181.156495346904,207.10797781803,108.011508609137,79.1964757517679,142.807188642092,150.832204167987,206.382475251361,207.826563320313,71.4144896428329,155.471519791544,207.766774231283,148.194433091349,148.139332612966,176.672863312885,253.295088288018,219.325340848068,125.04445473969,152.037288891118,144.103793851259,79.3629584436425,98.3284278863343,62.3794404302555,124.538127708345,71.6755402596947,85.5725167092718,148.106048156516,182.059037221966,167.835254055235,312.115313709146,83.5951438857974,136.847678816838,95.8530798533158,173.500156896804,87.0188192611044,88.8618139469913,103.283606335268,166.388333154561,190.868420454462,140.999058837392,206.841532100405,222.757376475265,279.466147002796,300.006693227316,238.776184145254,130.401864805083,94.2460256636284,139.294339512816,130.590915070109,158.825669460132,163.397158565141,91.8333095059875,208.569246432391,221.402951767801,1024.87984926844,446.685872631531,358.382659283504,214.19854793908,259.204925516013,179.254648420393,141.158147752974,136.551813185103,160.293273414836,195.194956731709,225.194193358983,213.532690612366,180.601841802825,134.831576964648,160.495728576207,135.845459243542,81.0936672892945,154.269340567941,153.953965907162,88.6268346550019,71.6771714266178,110.434977297046,94.6335874609985,160.920061502355,73.8220573540348,240.280671733104,194.042486880121,95.4641623788666,152.249557516423,200.982845004344,175.849328207172,162.411240038228,141.730101921532,150.207079305211,147.525657684212,205.525106056344,163.679826801616,153.178487722827,94.951600489785,140.82357257495,90.6083709413571,260.234425785485,166.864693476563,255.90574429915,180.758937802014,92.5725312963962,291.27761927674,177.119937009023,92.9434412540128,52.6393577228875,189.166452173495,97.634740798705,193.021915455099,428.46655986122,653.665605072887,109.37973409569,107.941919115978,227.872344234019,127.233308838953,152.620104605133,252.924689795891,120.814896833359,272.183493188007,84.1021135978121,132.241257952615,67.9071909669223,134.450894118806,138.485588674997 | |||
|short_description=p1@UQCRC1 | |||
}} |
Revision as of 18:49, 21 January 2014
Short description: | p1@UQCRC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UQCRC1_5end |
Coexpression cluster: | C3540_skeletal_left_heart_Mesenchymal_diaphragm_Alveolar_tongue |
Association with transcript: | 0bp_to_ENST00000412343, ENST00000415995, ENST00000463708, ENST00000467690, NM_003365, uc003cub.1, uc003cuc.1, uc003cud.1_5end |
EntrezGene: | UQCRC1 |
HGNC: | 12585 |
UniProt: | F8WEF1F8WER5P31930 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.91e-15 | 250 |
epithelial cell | 3.16e-14 | 253 |
epithelial cell of nephron | 7.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 6.05e-12 | 78 |
cell layer | 3.45e-11 | 309 |
epithelium | 3.80e-11 | 306 |
mesenchyme | 6.80e-11 | 160 |
entire embryonic mesenchyme | 6.80e-11 | 160 |
multilaminar epithelium | 4.49e-10 | 83 |
unilaminar epithelium | 1.17e-09 | 148 |
embryo | 1.45e-09 | 592 |
somite | 2.00e-09 | 71 |
presomitic mesoderm | 2.00e-09 | 71 |
presumptive segmental plate | 2.00e-09 | 71 |
dermomyotome | 2.00e-09 | 71 |
trunk paraxial mesoderm | 2.00e-09 | 71 |
paraxial mesoderm | 2.34e-09 | 72 |
presumptive paraxial mesoderm | 2.34e-09 | 72 |
dense mesenchyme tissue | 2.36e-09 | 73 |
trunk mesenchyme | 3.18e-09 | 122 |
trunk | 6.69e-09 | 199 |
epithelial tube | 4.81e-08 | 117 |
developing anatomical structure | 4.81e-08 | 581 |
nephron epithelium | 7.41e-07 | 15 |
renal tubule | 7.41e-07 | 15 |
nephron tubule | 7.41e-07 | 15 |
nephron | 7.41e-07 | 15 |
uriniferous tubule | 7.41e-07 | 15 |
nephrogenic mesenchyme | 7.41e-07 | 15 |
skeletal muscle tissue | 7.93e-07 | 62 |
striated muscle tissue | 7.93e-07 | 62 |
myotome | 7.93e-07 | 62 |
parenchyma | 8.37e-07 | 15 |
muscle tissue | 9.02e-07 | 64 |
musculature | 9.02e-07 | 64 |
musculature of body | 9.02e-07 | 64 |