FFCP PHASE1:Hg19::chr3:52570657..52570676,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=440957 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37257 | |||
|TSSclassifier=strong | |||
|UniProt=C9JAX8,Q8WVI0 | |||
|association_with_transcript=36bp_to_ENST00000476842,ENST00000477703,NM_001124767,uc003dep.2_5end | |||
|description=CAGE_peak_3_at_C3orf78_5end | |||
|id=chr3:52570657..52570676,+ | |||
|ontology_enrichment_celltype=CL:0002321!8.43e-12!248;CL:0000220!1.37e-11!246;CL:0000222!1.74e-11!119;CL:0000213!3.39e-08!57;CL:0000215!3.39e-08!57;CL:0000115!9.40e-08!35;CL:0000192!2.16e-07!42;CL:0000514!2.16e-07!42;CL:0000359!7.53e-07!32;CL:0000066!9.38e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000115;7.10e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.89e-12,250;CL:0000222,7.15e-12,121;CL:0000213,1.31e-08,58;CL:0000215,1.31e-08,58;CL:0000115,3.43e-08,36;CL:0000192,2.53e-07,43;CL:0000514,2.53e-07,43;CL:0002078,5.62e-07,45;CL:0000359,7.51e-07,32;CL:0000066,9.63e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!4.60e-11!69;UBERON:0001981!1.30e-10!60;UBERON:0007500!1.30e-10!60;UBERON:0004537!1.30e-10!60;UBERON:0006965!1.30e-10!60;UBERON:0002049!3.17e-10!79;UBERON:0007798!3.17e-10!79;UBERON:0003914!1.42e-09!118;UBERON:0001637!4.45e-09!42;UBERON:0003509!4.45e-09!42;UBERON:0004572!4.45e-09!42;UBERON:0001009!4.53e-08!113;UBERON:0004872!3.28e-07!84;UBERON:0000490!3.75e-07!138;UBERON:0004535!4.72e-07!110;UBERON:0001737!4.76e-07!9;UBERON:0004290!7.42e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.81e-07;9!UBERON:0001557;3.81e-07;9!UBERON:0001637;6.40e-07;42!UBERON:0003509;6.40e-07;42!UBERON:0004572;6.40e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,3.05e-11,68;UBERON:0007500,8.30e-11,59;UBERON:0001981,8.30e-11,59;UBERON:0004537,8.30e-11,59;UBERON:0006965,8.30e-11,59;UBERON:0002049,2.27e-10,78;UBERON:0007798,2.27e-10,78;UBERON:0003914,1.37e-09,117;UBERON:0001637,4.44e-09,42;UBERON:0003509,4.44e-09,42;UBERON:0004572,4.44e-09,42;UBERON:0007503,8.21e-09,78;UBERON:0000490,3.32e-08,148;UBERON:0001009,3.41e-08,112;UBERON:0004872,2.47e-07,83;UBERON:0004535,3.64e-07,109;UBERON:0001737,4.75e-07,9;UBERON:0002329,7.47e-07,71;UBERON:0003059,7.47e-07,71;UBERON:0007282,7.47e-07,71;UBERON:0004290,7.47e-07,71;UBERON:0009618,7.47e-07,71 | |||
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| |||
|short_description=p3@C3orf78 | |||
}} |
Revision as of 19:12, 21 January 2014
Short description: | p3@C3orf78 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C3orf78_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_ENST00000476842, ENST00000477703, NM_001124767, uc003dep.2_5end |
EntrezGene: | C3orf78 |
HGNC: | 37257 |
UniProt: | C9JAX8Q8WVI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.89e-12 | 250 |
mesodermal cell | 7.15e-12 | 121 |
lining cell | 1.31e-08 | 58 |
barrier cell | 1.31e-08 | 58 |
endothelial cell | 3.43e-08 | 36 |
smooth muscle cell | 2.53e-07 | 43 |
smooth muscle myoblast | 2.53e-07 | 43 |
meso-epithelial cell | 5.62e-07 | 45 |
vascular associated smooth muscle cell | 7.51e-07 | 32 |
epithelial cell | 9.63e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
vessel | 3.05e-11 | 68 |
epithelial tube open at both ends | 8.30e-11 | 59 |
blood vessel | 8.30e-11 | 59 |
blood vasculature | 8.30e-11 | 59 |
vascular cord | 8.30e-11 | 59 |
vasculature | 2.27e-10 | 78 |
vascular system | 2.27e-10 | 78 |
epithelial tube | 1.37e-09 | 117 |
artery | 4.44e-09 | 42 |
arterial blood vessel | 4.44e-09 | 42 |
arterial system | 4.44e-09 | 42 |
epithelial vesicle | 8.21e-09 | 78 |
unilaminar epithelium | 3.32e-08 | 148 |
circulatory system | 3.41e-08 | 112 |
splanchnic layer of lateral plate mesoderm | 2.47e-07 | 83 |
cardiovascular system | 3.64e-07 | 109 |
larynx | 4.75e-07 | 9 |
somite | 7.47e-07 | 71 |
presomitic mesoderm | 7.47e-07 | 71 |
presumptive segmental plate | 7.47e-07 | 71 |
dermomyotome | 7.47e-07 | 71 |
trunk paraxial mesoderm | 7.47e-07 | 71 |