FFCP PHASE1:Hg19::chr3:136676792..136676810,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53833 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6004 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IYY5,F8WC67 | |||
|association_with_transcript=-40bp_to_ENST00000309741,ENST00000469964_5end | |||
|coexpression_cluster_id=C2720 | |||
|description=CAGE_peak_2_at_IL20RB_5end | |||
|id=chr3:136676792..136676810,+ | |||
|ontology_enrichment_celltype=CL:0002076!8.32e-17!43;CL:0000066!1.47e-14!254;CL:0000223!2.42e-11!59;CL:0002251!5.62e-11!21;CL:0002620!1.39e-09!23;CL:0000057!2.33e-09!75;CL:0002159!5.60e-09!13;CL:0002368!6.52e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.01e-15;42!CL:0002159;9.19e-15;14!CL:0002251;4.00e-12;20!CL:0002368;2.07e-10;13!CL:0002620;5.71e-09;23!CL:0000622;6.02e-09;5!CL:0000362;3.05e-08;9!CL:0000154;2.63e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.10e-19,42;CL:0000066,2.01e-18,253;CL:0000223,8.64e-15,58;CL:0002159,9.86e-15,14;CL:0002251,3.86e-12,20;CL:0002368,2.03e-10,13;CL:0002620,5.78e-09,23;CL:0000622,6.10e-09,5;CL:0000362,3.06e-08,9;CL:0000154,2.66e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;2.01e-08;58 | |||
|ontology_enrichment_disease=DOID:305!5.74e-10!106;DOID:0050687!1.52e-07!143;DOID:1749!3.91e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:17;3.48e-07;5!DOID:450;3.48e-07;5!DOID:66;3.48e-07;5!DOID:423;3.48e-07;5!DOID:0080000;3.48e-07;5!DOID:11722;3.48e-07;5!DOID:1749;4.96e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.29e-08,106;DOID:17,3.16e-07,5;DOID:450,3.16e-07,5;DOID:66,3.16e-07,5;DOID:423,3.16e-07,5;DOID:0080000,3.16e-07,5;DOID:11722,3.16e-07,5;DOID:1749,4.90e-07,14;DOID:0050687,9.90e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.86e-23!95;UBERON:0004119!1.49e-14!169;UBERON:0000925!1.49e-14!169;UBERON:0006595!1.49e-14!169;UBERON:0001004!1.37e-13!72;UBERON:0002199!8.97e-13!45;UBERON:0002416!8.97e-13!45;UBERON:0002097!1.12e-12!40;UBERON:0001007!1.81e-11!155;UBERON:0001555!1.81e-11!155;UBERON:0007026!1.81e-11!155;UBERON:0000161!4.34e-11!35;UBERON:0000065!1.44e-09!53;UBERON:0001737!6.62e-09!9;UBERON:0000072!1.51e-08!46;UBERON:0000077!2.20e-08!130;UBERON:0001557!2.82e-08!19;UBERON:0000166!6.15e-08!21;UBERON:0004921!6.67e-08!129;UBERON:0004185!6.67e-08!129;UBERON:0000165!6.90e-08!28;UBERON:0000930!6.90e-08!28;UBERON:0008947!8.99e-07!38;UBERON:0003258!8.99e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.22e-13;9!UBERON:0001557;8.22e-13;9!UBERON:0002097;1.35e-11;41!UBERON:0002199;1.88e-10;46!UBERON:0002416;1.88e-10;46!UBERON:0000165;4.31e-10;28!UBERON:0000161;7.75e-10;19!UBERON:0000166;7.75e-10;19!UBERON:0000065;1.03e-09;44!UBERON:0003102;3.38e-09;50!UBERON:0001004;4.36e-09;65!UBERON:0000072;8.24e-09;37!UBERON:0003729;8.46e-09;13!UBERON:0000344;1.89e-08;20!UBERON:0000486;3.51e-08;12!UBERON:0000365;3.06e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.32e-25,99;UBERON:0001004,1.76e-18,74;UBERON:0002097,3.97e-14,41;UBERON:0004119,1.56e-13,160;UBERON:0000925,1.56e-13,160;UBERON:0006595,1.56e-13,160;UBERON:0000065,3.11e-13,54;UBERON:0002199,6.36e-13,46;UBERON:0002416,6.36e-13,46;UBERON:0001737,7.56e-13,9;UBERON:0001557,5.89e-12,19;UBERON:0000072,3.55e-11,47;UBERON:0000166,6.58e-11,22;UBERON:0000161,5.01e-10,36;UBERON:0001007,1.00e-09,145;UBERON:0001555,1.00e-09,145;UBERON:0007026,1.00e-09,145;UBERON:0000165,1.20e-09,29;UBERON:0000930,1.20e-09,29;UBERON:0001041,6.06e-09,87;UBERON:0003729,6.86e-09,13;UBERON:0000344,1.54e-08,20;UBERON:0008947,3.56e-08,38;UBERON:0003258,3.56e-08,38;UBERON:0004921,2.61e-07,118;UBERON:0000365,2.99e-07,5;UBERON:0000033,3.09e-07,56 | |||
|phase1_expression=1.63510541343501,2.99740733447376,0.704772020479856,0,0,1.74467704820074,0,2.52687949370732,0.783556884599516,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.43594857135249,12.04823675113,19.9667165490065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,15.3004021082868,22.2470665670658,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5490788156969,2.48485975847659,0.506522046658319,1.85372853138506,1.72101972449288,0.354668382198357,0,0,0,0,0.134710672069688,0,0.151357427644931,0,2.10889288650417,0,2.2818872861778,1.49448680551801,0.704606991862589,0.971237666208789,0,1.42907919878425,0,1.75653827998801,0,1.48360157567134,0,1.43723628363248,0,0,1.10825646193673,0.877955241761676,0,0.150238058906597,0,2.69084453533293,10.2507546632912,7.41761654058466,3.90118424909723,7.00757198821385,3.86460810068444,5.58350568994769,1.35021065793013,1.94874010322397,2.01947019395292,4.14224543890347,1.13152239773168,0.710019185033229,0.10075209822764,0.169560592310488,9.46978180500154,4.90943017063502,7.7437240755031,0,0,0,0.207322110030741,0,0,0,0.643240938192885,1.38134921352481,6.50115099244771,5.0531563716871,8.51808960286876,10.2836660947642,8.19437501603839,8.49263590039433,8.49729831960384,7.82993043066619,9.97751680385217,8.82996593064057,11.1576675514453,0,0,0,0,0,0,0,0,0.368965315629341,0,28.3155736354254,29.2244558469811,15.5819907238028,14.166032109255,0.651616610620649,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,11.2480600784132,17.3021592044825,9.21538132075512,2.5971971583826,13.0785272331283,3.06706143332169,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0,0,0,0,0,0,0.714889968290738,3.25572963234866,0.823240336780769,0,1.06617584622764,0,0,0,0,0,0,0,0,1.14861935834114,0,0.723906533337896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0.902838299183157,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,3.47350930946288,1.53461973288062,4.2099014164961,1.28139149255701,3.58195074346692,0.804269605718038,2.96836132889982,0,0.532685175939381,0.246381468041427,0,0,0.120859449591622,2.6065841139427,9.85266581614091,0.574072240823034,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,1.44257416306811,0,0.165018999841176,15.5051695258967,24.0522291033513,0,0.193341436584244,0,0,0.137836572484531,0.429680979473094,0,0,0,19.3383350972344,7.87979276196935,4.97689578728878,4.046311234222,0.929691098594572,1.5740617341532,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0.38126038784765,0,2.1396949401696,0.636406495851874,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,2.26016233240486,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0.196498082026242,0,0.709522128141196,0.844430541190656,2.63435914367922,0,0,20.4953100105341,17.4278591639305,10.8890984861323,1.12972560932135,4.3050537267123,18.5318623234388,9.75546337780687,3.67557440331135,0,0,0,0,0,0,0,0,0,0,12.4970510150326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,1.31857361344705,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0.311039587661807,0,0.537063524026827,0,0.197286811273867,0,0,0,0,0,0,0,0,0.455173793141999,0.508507300585533,1.18193840883968,0,0,0,0,0,0,0,0,0,32.3547236651401,46.0098356119391,2.84715956464049,0,4.38071418337314,5.29570102017656,0.217294743844016,2.23300811812344,1.55715908783166,4.79731298416771,0,0,0,0,0.392125068635479,0.671286347903371,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,1.9566461893209,0,0,0,0,0,0,0,0,0,0.627865836814451,0,0,6.37903495860438,0,34.4933238898609,2.61177619741208,0,0,9.48212046633035,17.0298108810812,6.73346747836316,15.6152316546355,0,0.225980740780532,0.137041924646751,0,0,0.195551382734803,1.12222348352147,0,0,4.32271251462318,0.229073192331831,0,0.288109595976299,0,16.4985824231757,0,0.209205692624666,0.407992870545287,0.288950589901519,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,3.0952078182318,0,16.436299692364,0,0,0,0.179287339332845,8.0604382874167,0,0,0,0,0,0,0,0,0,0,0.879313402068495,0,0,0,0.342173675768659,0,0,0,0,0,0,0,13.4051664131738,0,1.5041393641362,0,0.655745261419609,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19403842309499,1.40227985908335,0.554805861502613,0,0.251567901752575,0,5.03448150473232,0.756154618816195,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0.686791410365586,1.01024846629776,1.26184898228651,0,2.14441591374926,1.04397716786085,1.36023555307363,0.231522474323834,1.22368352253234,0,3.08801447160972,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,2.6208787907713,1.96618327002975,2.3244333569449,0,0,0,2.27006381426734,0,22.66048025055,9.95323616052756,0,0,0,0,0,0,0,0,0,0,0,0,0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| |||
|short_description=p2@IL20RB | |||
}} |
Revision as of 21:33, 21 January 2014
Short description: | p2@IL20RB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IL20RB_5end |
Coexpression cluster: | C2720_salivary_cervical_epidermoid_malignant_Keratinocyte_Small_Sebocyte |
Association with transcript: | -40bp_to_ENST00000309741, ENST00000469964_5end |
EntrezGene: | IL20RB |
HGNC: | 6004 |
UniProt: | Q8IYY5F8WC67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.10e-19 | 42 |
epithelial cell | 2.01e-18 | 253 |
endodermal cell | 8.64e-15 | 58 |
general ecto-epithelial cell | 9.86e-15 | 14 |
epithelial cell of alimentary canal | 3.86e-12 | 20 |
respiratory epithelial cell | 2.03e-10 | 13 |
skin fibroblast | 5.78e-09 | 23 |
acinar cell | 6.10e-09 | 5 |
epidermal cell | 3.06e-08 | 9 |
protein secreting cell | 2.66e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.32e-25 | 99 |
respiratory system | 1.76e-18 | 74 |
skin of body | 3.97e-14 | 41 |
endoderm-derived structure | 1.56e-13 | 160 |
endoderm | 1.56e-13 | 160 |
presumptive endoderm | 1.56e-13 | 160 |
respiratory tract | 3.11e-13 | 54 |
integument | 6.36e-13 | 46 |
integumental system | 6.36e-13 | 46 |
larynx | 7.56e-13 | 9 |
upper respiratory tract | 5.89e-12 | 19 |
segment of respiratory tract | 3.55e-11 | 47 |
oral opening | 6.58e-11 | 22 |
orifice | 5.01e-10 | 36 |
digestive system | 1.00e-09 | 145 |
digestive tract | 1.00e-09 | 145 |
primitive gut | 1.00e-09 | 145 |
mouth | 1.20e-09 | 29 |
stomodeum | 1.20e-09 | 29 |
foregut | 6.06e-09 | 87 |
mouth mucosa | 6.86e-09 | 13 |
mucosa | 1.54e-08 | 20 |
respiratory primordium | 3.56e-08 | 38 |
endoderm of foregut | 3.56e-08 | 38 |
subdivision of digestive tract | 2.61e-07 | 118 |
urothelium | 2.99e-07 | 5 |
head | 3.09e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.29e-08 | 106 |
musculoskeletal system disease | 3.16e-07 | 5 |
myotonic disease | 3.16e-07 | 5 |
muscle tissue disease | 3.16e-07 | 5 |
myopathy | 3.16e-07 | 5 |
muscular disease | 3.16e-07 | 5 |
myotonic dystrophy | 3.16e-07 | 5 |
squamous cell carcinoma | 4.90e-07 | 14 |
cell type cancer | 9.90e-07 | 143 |