FFCP PHASE1:Hg19::chr3:193096512..193096519,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=344905 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31789 | |||
|TSSclassifier=strong | |||
|UniProt=Q4VNC0 | |||
|association_with_transcript=0bp_to_NM_198505,uc011bsq.1_5end | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_3_at_ATP13A5_5end | |||
|id=chr3:193096512..193096519,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.55e-98;1 | |||
|ontology_enrichment_disease=DOID:178!8.64e-12!1;DOID:326!8.64e-12!1;DOID:3978!8.64e-12!1;DOID:3394!8.64e-12!1;DOID:5844!8.64e-12!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!7.42e-33!3;UBERON:0005290!7.42e-33!3;UBERON:0010096!7.42e-33!3;UBERON:0007023!2.61e-18!115;UBERON:0004121!2.30e-13!169;UBERON:0000924!5.24e-13!173;UBERON:0006601!5.24e-13!173;UBERON:0005743!7.71e-13!86;UBERON:0002298!1.00e-12!8;UBERON:0001736!2.93e-12!1;UBERON:0006298!2.93e-12!1;UBERON:0000033!3.01e-12!123;UBERON:0002336!3.65e-12!1;UBERON:0001018!3.65e-12!1;UBERON:0002473!3.65e-12!1;UBERON:0005340!3.65e-12!1;UBERON:0002316!3.65e-12!1;UBERON:0003544!3.65e-12!1;UBERON:0001020!3.65e-12!1;UBERON:0005970!3.65e-12!1;UBERON:0002437!3.65e-12!1;UBERON:0007029!4.06e-12!1;UBERON:0000153!1.34e-11!129;UBERON:0007811!1.34e-11!129;UBERON:0002372!1.63e-11!1;UBERON:0001961!1.63e-11!1;UBERON:0001744!1.63e-11!1;UBERON:0001735!1.63e-11!1;UBERON:0000073!1.68e-11!94;UBERON:0001016!1.68e-11!94;UBERON:0001017!3.88e-11!82;UBERON:0000955!7.67e-11!69;UBERON:0006238!7.67e-11!69;UBERON:0001049!1.03e-10!57;UBERON:0005068!1.03e-10!57;UBERON:0006241!1.03e-10!57;UBERON:0007135!1.03e-10!57;UBERON:0003075!1.09e-10!86;UBERON:0007284!1.09e-10!86;UBERON:0002616!2.53e-10!59;UBERON:0002346!3.69e-10!90;UBERON:0004733!1.17e-08!12;UBERON:0002028!1.17e-08!12;UBERON:0007277!1.17e-08!12;UBERON:0004732!4.98e-08!13;UBERON:0003076!5.09e-07!15;UBERON:0003057!5.09e-07!15;UBERON:0001829!9.44e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001736;1.55e-98;1!UBERON:0001829;3.52e-50;2!UBERON:0001896;5.04e-34;3!UBERON:0005290;5.04e-34;3!UBERON:0001044;8.34e-18;6!UBERON:0003293;8.34e-18;6!UBERON:0003294;8.34e-18;6!UBERON:0010047;8.34e-18;6!UBERON:0003408;8.34e-18;6!UBERON:0002298;8.34e-18;6!UBERON:0000167;8.34e-18;6!UBERON:0004733;1.27e-09;12!UBERON:0002028;1.27e-09;12!UBERON:0004732;5.49e-09;13!UBERON:0001041;1.93e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,2.55e-98,1;UBERON:0006298,2.55e-98,1;UBERON:0001829,4.52e-50,2;UBERON:0001896,4.27e-34,3;UBERON:0005290,4.27e-34,3;UBERON:0010096,4.27e-34,3;UBERON:0002298,7.67e-18,6;UBERON:0001044,9.07e-18,6;UBERON:0003293,9.07e-18,6;UBERON:0003294,9.07e-18,6;UBERON:0010047,9.07e-18,6;UBERON:0000167,9.07e-18,6;UBERON:0003408,3.02e-11,10;UBERON:0004733,1.22e-09,12;UBERON:0002028,1.22e-09,12;UBERON:0007277,1.22e-09,12;UBERON:0004732,5.28e-09,13;UBERON:0003076,5.55e-08,15;UBERON:0003057,5.55e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349839999984783,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,2.88415533995816,0.248385611765534,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2936464170227,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@ATP13A5 | |||
}} |
Revision as of 23:22, 21 January 2014
Short description: | p3@ATP13A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATP13A5_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | 0bp_to_NM_198505, uc011bsq.1_5end |
EntrezGene: | ATP13A5 |
HGNC: | 31789 |
UniProt: | Q4VNC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
submandibular gland | 2.55e-98 | 1 |
submandibular gland primordium | 2.55e-98 | 1 |
major salivary gland | 4.52e-50 | 2 |
medulla oblongata | 4.27e-34 | 3 |
myelencephalon | 4.27e-34 | 3 |
future myelencephalon | 4.27e-34 | 3 |
brainstem | 7.67e-18 | 6 |
saliva-secreting gland | 9.07e-18 | 6 |
gland of oral region | 9.07e-18 | 6 |
gland of foregut | 9.07e-18 | 6 |
oral gland | 9.07e-18 | 6 |
oral cavity | 9.07e-18 | 6 |
gland of gut | 3.02e-11 | 10 |
segmental subdivision of hindbrain | 1.22e-09 | 12 |
hindbrain | 1.22e-09 | 12 |
presumptive hindbrain | 1.22e-09 | 12 |
segmental subdivision of nervous system | 5.28e-09 | 13 |
posterior neural tube | 5.55e-08 | 15 |
chordal neural plate | 5.55e-08 | 15 |