FFCP PHASE1:Hg19::chr3:195538743..195538754,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4585 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7514 | |||
|TSSclassifier=strong | |||
|UniProt=E7ERK0,E7EQG8,E7EUL9,E7ENC5,E7EW47,E7ETT5,E7EWN1,E7EQT2 | |||
|association_with_transcript=5bp_to_ENST00000462323,ENST00000466475,ENST00000470451,ENST00000475231,ENST00000477086,ENST00000477756,ENST00000478156,ENST00000479406,ENST00000480843_5end | |||
|coexpression_cluster_id=C1270 | |||
|description=CAGE_peak_2_at_MUC4_5end | |||
|id=chr3:195538743..195538754,- | |||
|ontology_enrichment_celltype=CL:0000039!5.22e-11!7;CL:0000586!5.22e-11!7;CL:0002322!2.06e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.47e-20;7!CL:0000586;1.47e-20;7!CL:0002536;3.29e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.50e-20,7;CL:0000586,1.50e-20,7;CL:0002536,3.17e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.37e-10;10!UBERON:0005564;3.37e-10;10!UBERON:0008947;2.45e-07;29 | |||
|ontology_enrichment_disease=DOID:305!2.14e-12!106;DOID:1749!1.11e-09!14;DOID:0050687!6.50e-09!143;DOID:3095!3.65e-07!22;DOID:2994!3.65e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.99e-09;14!DOID:3095;5.25e-08;22!DOID:2994;5.25e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.05e-12,106;DOID:0050687,7.18e-10,143;DOID:1749,3.38e-09,14;DOID:3095,5.34e-08,22;DOID:2994,5.34e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.26e-12!169;UBERON:0000925!3.26e-12!169;UBERON:0006595!3.26e-12!169;UBERON:0004921!4.21e-11!129;UBERON:0004185!4.21e-11!129;UBERON:0000077!2.07e-10!130;UBERON:0001007!2.28e-10!155;UBERON:0001555!2.28e-10!155;UBERON:0007026!2.28e-10!155;UBERON:0000464!3.76e-10!104;UBERON:0000466!4.24e-09!126;UBERON:0003133!1.11e-08!48;UBERON:0000059!8.12e-08!11;UBERON:0007023!1.56e-07!115;UBERON:0005156!4.40e-07!59;UBERON:0000990!4.40e-07!59;UBERON:0002294!5.34e-07!7;UBERON:0001173!5.34e-07!7;UBERON:0004912!5.34e-07!7;UBERON:0000065!6.12e-07!53;UBERON:0001004!8.60e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0006562;3.04e-09;2!UBERON:0000341;3.50e-09;2!UBERON:0003127;4.44e-09;2!UBERON:0001987;4.47e-09;4!UBERON:0003135;5.20e-09;11!UBERON:0000473;2.02e-08;8!UBERON:0004921;4.17e-07;33!UBERON:0001155;4.22e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,2.82e-09,48;UBERON:0000341,3.43e-09,2;UBERON:0001987,4.11e-09,4;UBERON:0004340,4.11e-09,4;UBERON:0003127,4.53e-09,2;UBERON:0003135,5.16e-09,11;UBERON:0000473,2.06e-08,8;UBERON:0004119,5.07e-08,160;UBERON:0000925,5.07e-08,160;UBERON:0006595,5.07e-08,160;UBERON:0005178,1.24e-07,34;UBERON:0002224,1.24e-07,34;UBERON:0005181,2.27e-07,35;UBERON:0004921,2.90e-07,118;UBERON:0001155,4.29e-07,9;UBERON:0005156,4.38e-07,59;UBERON:0000990,4.38e-07,59;UBERON:0005631,9.30e-07,14;UBERON:0000158,9.30e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,20.5334889802362,7.91300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.662648841607426,0.232387885739037,0.414644220061482,0.252320850875628,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,4.99306318531491,3.0239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35359883872224,0,0,0,0.105551628892876,0,0,0,0,0,0,0.764628819135115,0,2.23874754722178,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,4.78195171802567,7.73594963487214,0,0,0,0,4.85289096195565,0.179021174675609,0,0.986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,3.0510438035132,0,0,0,0,0,0,0,0.331737779793674,0,0,0,0,4.30921447621264,0,13.3727064545075,5.92400453104496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,14.9289289661776,4.33442066066362,2.4441205797345,0,0,0,0,0,0,0,2.15231080825299,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0.347119476670262,29.2017344294845,0,0,0,0,0,0,1.84279131327997,0,3.38971111170799,0,0,0.0633107959558787,42.8257528189219,0.480952921509202,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0.687697182986169,0.83088067605837,0,0,0,0.335434687599266,0,0,0,0,0.767660789277781,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,19.0300056025501,2.88326013932776,6.75978511928564,1.65695622138878,0,0,0,7.66009509324218,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,2.81000943484129,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.0361822045529,0,0,0,0,0,0,0,0.639471856518258,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,1.06172751012966,0.550285795565037,0,0,0,0,0.376051641746286,0,0,0,0,23.8048298809443,0,0,0,0.0634158101939068,0,0,3.96968942711435,0,18.9088392906601,0,0,0,0,2.7497734750418,0,0,0,0,0,0,0.78493092850514,0,0.560544326627578,0.913158720509496,0,0,0,0.158013611732727,0,0,0,0,0,0,2.15113679410139,0,0,0,2.52017555398455,0,0,0,0.098150233615243,0,0,0,0,0.971421986118279,0,0,0,0.11294608203896,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,1.07132363163395,0,14.1224805372936,0,0.458729283404541,0,0,0,0,0,0,0,0,0.252332849670158,2.4038425832013,0.253397002022874,8.15910637935854,30.997219010805,34.0930077274275,6.51839602160175,0.151557396436479,0,0,0,15.1396127149696,8.57031953269465,0.129177819672012,0.31037357147929,0,0,0,0.653150243690884,0.342233301085281,11.921313383582,17.7871069373837,5.65522606128223,4.96559938526944,0,0,0,0,0.733448665097199,0,0.665756774185513,0,0 | |||
|short_description=p2@MUC4 | |||
}} |
Revision as of 23:30, 21 January 2014
Short description: | p2@MUC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MUC4_5end |
Coexpression cluster: | C1270_papillotubular_gall_epidermoid_mucinous_trachea_throat_colon |
Association with transcript: | 5bp_to_ENST00000462323, ENST00000466475, ENST00000470451, ENST00000475231, ENST00000477086, ENST00000477756, ENST00000478156, ENST00000479406, ENST00000480843_5end |
EntrezGene: | MUC4 |
HGNC: | 7514 |
UniProt: | E7ERK0E7EQG8E7EUL9E7ENC5E7EW47E7ETT5E7EWN1E7EQT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.50e-20 | 7 |
germ cell | 1.50e-20 | 7 |
amniotic epithelial cell | 3.17e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
reproductive organ | 2.82e-09 | 48 |
throat | 3.43e-09 | 2 |
placenta | 4.11e-09 | 4 |
allantois | 4.11e-09 | 4 |
open tracheal system trachea | 4.53e-09 | 2 |
male reproductive organ | 5.16e-09 | 11 |
testis | 2.06e-08 | 8 |
endoderm-derived structure | 5.07e-08 | 160 |
endoderm | 5.07e-08 | 160 |
presumptive endoderm | 5.07e-08 | 160 |
thoracic cavity element | 1.24e-07 | 34 |
thoracic cavity | 1.24e-07 | 34 |
thoracic segment organ | 2.27e-07 | 35 |
subdivision of digestive tract | 2.90e-07 | 118 |
colon | 4.29e-07 | 9 |
reproductive structure | 4.38e-07 | 59 |
reproductive system | 4.38e-07 | 59 |
extraembryonic membrane | 9.30e-07 | 14 |
membranous layer | 9.30e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.05e-12 | 106 |
cell type cancer | 7.18e-10 | 143 |
squamous cell carcinoma | 3.38e-09 | 14 |
germ cell and embryonal cancer | 5.34e-08 | 22 |
germ cell cancer | 5.34e-08 | 22 |