FFCP PHASE1:Hg19::chr4:27732049..27732064,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:27732049..27732064,+ | |||
|id=chr4:27732049..27732064,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.04e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002144;1.22e-14;3!CL:0000569;3.42e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,1.22e-14,3;CL:0000569,3.42e-11,4;CL:0000011,3.42e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.80e-11;4!UBERON:0007284;2.80e-11;4!CL:0000011;3.42e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;3.42e-11;4!DOID:1325;6.04e-07;7!DOID:3904;6.04e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.10e-11,4;DOID:1325,5.70e-07,7;DOID:3904,5.70e-07,7 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;9.91e-41;1!UBERON:0005623;9.91e-41;1!UBERON:0010523;1.22e-14;3!UBERON:0001915;1.22e-14;3!UBERON:0001982;1.22e-14;3!UBERON:0003978;1.40e-14;3!UBERON:0000946;1.40e-14;3!UBERON:0000948;3.15e-08;22!UBERON:0007100;2.35e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,9.91e-41,1;UBERON:0005623,9.91e-41,1;UBERON:0010523,1.22e-14,3;UBERON:0001915,1.22e-14,3;UBERON:0001982,1.22e-14,3;UBERON:0003978,1.40e-14,3;UBERON:0009751,1.40e-14,3;UBERON:0000946,1.40e-14,3;UBERON:0002523,1.40e-14,3;UBERON:0005983,1.40e-14,3;UBERON:0002165,1.40e-14,3;UBERON:0002062,1.40e-14,3;UBERON:0007280,1.40e-14,3;UBERON:0000948,1.27e-07,24;UBERON:0005498,1.27e-07,24;UBERON:0004140,1.27e-07,24;UBERON:0009881,1.27e-07,24;UBERON:0004141,1.27e-07,24;UBERON:0003084,1.27e-07,24;UBERON:0007005,1.27e-07,24;UBERON:0004139,1.27e-07,24;UBERON:0004291,1.27e-07,24;UBERON:0004797,5.38e-07,7;UBERON:0007100,7.03e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0,0,0,0,1.35426486594342,0,0,0.224723484445085,0,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.12326526862215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0.571652865261156,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,6.64565229633883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,1.81477108515887,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,1.8689887846723,0,0,0,0.470317296361523,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:27732049..27732064,+ | |||
}} |
Revision as of 00:36, 22 January 2014
Short description: | p@chr4:27732049..27732064, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:27732049..27732064, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 1.22e-14 | 3 |
cardiac mesenchymal cell | 3.42e-11 | 4 |
migratory trunk neural crest cell | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 9.91e-41 | 1 |
semi-lunar valve | 9.91e-41 | 1 |
microcirculatory vessel | 1.22e-14 | 3 |
endothelium of capillary | 1.22e-14 | 3 |
capillary | 1.22e-14 | 3 |
valve | 1.40e-14 | 3 |
cardiac mesenchyme | 1.40e-14 | 3 |
cardial valve | 1.40e-14 | 3 |
tunica intima | 1.40e-14 | 3 |
heart layer | 1.40e-14 | 3 |
endocardium | 1.40e-14 | 3 |
endocardial cushion | 1.40e-14 | 3 |
presumptive endocardium | 1.40e-14 | 3 |
heart | 1.27e-07 | 24 |
primitive heart tube | 1.27e-07 | 24 |
primary heart field | 1.27e-07 | 24 |
anterior lateral plate mesoderm | 1.27e-07 | 24 |
heart tube | 1.27e-07 | 24 |
heart primordium | 1.27e-07 | 24 |
cardiac mesoderm | 1.27e-07 | 24 |
cardiogenic plate | 1.27e-07 | 24 |
heart rudiment | 1.27e-07 | 24 |
blood vessel layer | 5.38e-07 | 7 |
primary circulatory organ | 7.03e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.10e-11 | 4 |
bronchus cancer | 5.70e-07 | 7 |
bronchogenic carcinoma | 5.70e-07 | 7 |