FFCP PHASE1:Hg19::chr4:74980292..74980303,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:74980292..74980303,+ | |||
|id=chr4:74980292..74980303,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.50e-16!43;CL:0002159!1.75e-15!13;CL:0000223!7.08e-13!59;CL:0002368!8.88e-12!13;CL:0000066!4.30e-11!254;CL:0002202!8.85e-08!9;CL:0002632!8.85e-08!9;CL:0002166!1.37e-07!3;CL:0002621!1.84e-07!3;CL:0000622!1.96e-07!5;CL:0002328!5.52e-07!3;CL:0002077!6.15e-07!33;CL:0000362!7.16e-07!8;CL:0002251!9.42e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.88e-28;14!CL:0000362;1.25e-17;9!CL:0000240;1.45e-17;6!CL:0000311;1.45e-17;6!CL:0000079;1.45e-17;6!CL:0000237;1.45e-17;6!CL:0002536;5.25e-14;2!CL:0000317;1.19e-13;2!CL:1000448;1.19e-13;2!CL:0002308;1.19e-13;2!CL:0002140;1.19e-13;2!CL:0002077;4.11e-13;34!CL:0000622;2.81e-12;5!CL:0000312;3.41e-12;5!CL:0002076;6.35e-12;42!CL:0000154;2.57e-10;6!CL:0002166;4.90e-10;3!CL:0002621;5.99e-10;3!CL:0002251;3.20e-08;20!CL:0002368;3.75e-08;13!CL:0002336;4.98e-08;1!CL:0002261;4.98e-08;1!CL:0002170;4.98e-08;1!CL:0002327;8.52e-08;4!CL:0000150;5.00e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,2.36e-28,14;CL:0000362,1.44e-17,9;CL:0000240,1.52e-17,6;CL:0000311,1.52e-17,6;CL:0000079,1.52e-17,6;CL:0000237,1.52e-17,6;CL:0000036,1.52e-17,6;CL:0000357,1.52e-17,6;CL:0000114,1.52e-17,6;CL:0002536,4.18e-14,2;CL:0002076,5.60e-14,42;CL:0002077,6.84e-14,34;CL:0000317,1.35e-13,2;CL:1000448,1.35e-13,2;CL:0002308,1.35e-13,2;CL:0002140,1.35e-13,2;CL:0000622,3.04e-12,5;CL:0000312,3.69e-12,5;CL:0000223,1.01e-11,58;CL:0000066,2.38e-11,253;CL:0000154,2.75e-10,6;CL:0002166,4.39e-10,3;CL:0002621,6.84e-10,3;CL:0002251,3.31e-08,20;CL:0002368,3.35e-08,13;CL:0002321,4.13e-08,250;CL:0002336,4.66e-08,1;CL:0002261,4.66e-08,1;CL:0002170,4.66e-08,1;CL:0002327,8.53e-08,4;CL:0000221,5.13e-07,72;CL:0000150,5.21e-07,9;CL:0000076,8.62e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000357;1.45e-17;6!CL:0000114;1.45e-17;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.84e-15!169;UBERON:0000924!2.55e-14!173;UBERON:0006601!2.55e-14!173;UBERON:0001004!5.15e-14!72;UBERON:0000033!1.43e-13!123;UBERON:0000153!1.80e-12!129;UBERON:0007811!1.80e-12!129;UBERON:0000165!3.00e-11!28;UBERON:0000930!3.00e-11!28;UBERON:0000923!3.56e-11!604;UBERON:0005291!3.56e-11!604;UBERON:0006598!3.56e-11!604;UBERON:0002532!3.56e-11!604;UBERON:0002050!4.08e-11!605;UBERON:0005423!4.08e-11!605;UBERON:0000922!1.03e-10!612;UBERON:0000062!1.06e-10!511;UBERON:0000467!1.26e-10!625;UBERON:0000480!1.44e-10!626;UBERON:0000481!1.63e-10!347;UBERON:0001444!1.92e-10!48;UBERON:0000475!2.04e-10!365;UBERON:0000064!2.76e-10!219;UBERON:0004119!8.13e-10!169;UBERON:0000925!8.13e-10!169;UBERON:0006595!8.13e-10!169;UBERON:0001708!3.39e-09!4;UBERON:0001704!3.39e-09!4;UBERON:0001828!6.52e-09!8;UBERON:0000468!8.08e-09!659;UBERON:0003129!1.33e-08!11;UBERON:0000065!2.35e-08!53;UBERON:0000166!6.33e-08!21;UBERON:0001007!6.82e-08!155;UBERON:0001555!6.82e-08!155;UBERON:0007026!6.82e-08!155;UBERON:0000477!8.95e-08!286;UBERON:0008947!9.71e-08!38;UBERON:0003258!9.71e-08!38;UBERON:0001949!1.84e-07!3;UBERON:0000075!4.38e-07!13;UBERON:0005944!4.38e-07!13;UBERON:0004288!4.38e-07!13;UBERON:0003089!4.38e-07!13;UBERON:0004815!5.52e-07!3;UBERON:0002031!5.52e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.19e-13;2!UBERON:0007771;1.19e-13;2!UBERON:0003297;1.19e-13;2!UBERON:0001821;1.19e-13;2!UBERON:0003487;1.19e-13;2!UBERON:0001820;1.19e-13;2!UBERON:0001003;1.64e-10;15!UBERON:0007376;1.64e-10;15!UBERON:0001949;5.99e-10;3!UBERON:0010371;2.87e-09;31!UBERON:0000305;7.51e-09;7!UBERON:0003729;1.99e-08;13!UBERON:0000165;4.91e-08;28!UBERON:0001301;4.98e-08;1!UBERON:0001911;8.52e-08;4!UBERON:0001708;9.89e-08;4!UBERON:0008895;9.89e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.35e-13,2;UBERON:0007771,1.35e-13,2;UBERON:0003297,1.35e-13,2;UBERON:0001821,1.35e-13,2;UBERON:0003487,1.35e-13,2;UBERON:0001820,1.35e-13,2;UBERON:0005089,1.35e-13,2;UBERON:0005088,1.35e-13,2;UBERON:0001003,1.78e-10,15;UBERON:0007376,1.78e-10,15;UBERON:0007383,1.78e-10,15;UBERON:0003102,4.09e-10,99;UBERON:0001949,6.84e-10,3;UBERON:0000305,6.39e-09,7;UBERON:0003729,2.07e-08,13;UBERON:0001301,4.07e-08,1;UBERON:0000033,4.14e-08,56;UBERON:0004871,7.31e-08,8;UBERON:0001911,8.53e-08,4;UBERON:0005333,8.53e-08,4;UBERON:0008425,8.53e-08,4;UBERON:0005311,8.53e-08,4;UBERON:0001708,9.11e-08,4;UBERON:0008895,9.11e-08,4;UBERON:0000165,1.07e-07,29;UBERON:0000930,1.07e-07,29;UBERON:0004121,2.24e-07,171;UBERON:0000924,2.24e-07,171;UBERON:0006601,2.24e-07,171;UBERON:0000153,3.47e-07,62;UBERON:0007811,3.47e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.40285509343189,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,1.83884244895785,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.132409180813219,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.816616685019573,0.368502951935304,0.103325781175765,0,0,0,0,0.505008341862199,0.250237039743928,1.10825646193673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,3.54569956768085,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0.217879444092406,0.474541238222193,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,1.53650399572076,1.1240175325762,2.21163739305588,2.59247646443883,0,0,0,0,0,0,0,0,0,0,0,0,0,8.43604505880993,0.671928512795438,2.69372684760534,6.17953806649653,6.39394664730716,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,1.14853107599234,1.30012049207304,0,0,0,0,0,0,0,0,0,1.81813406897076,0,8.0396008871588,0.708104465988849,0,0,0,0,0,0,0,1.28812398067792,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,1.32687795048244,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,1.05844323998063,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,1.76098157038881,0.971121518136371,0.394584402849391,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,1.04471047896483,2.79562669187248,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0.979156554036111,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0,0,0.276629009856872,0,0,0,0,2.56800037930351,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,5.38762026823896,0.6828739083758,0,0,0,0,0,0.4582137370881,0,1.91107787795487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:74980292..74980303,+ | |||
}} |
Revision as of 01:37, 22 January 2014
Short description: | p@chr4:74980292..74980303, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:74980292..74980303, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin gland | 1.35e-13 | 2 |
epidermis gland | 1.35e-13 | 2 |
gland of integumental system | 1.35e-13 | 2 |
sebaceous gland | 1.35e-13 | 2 |
skin sebaceous gland | 1.35e-13 | 2 |
sweat gland | 1.35e-13 | 2 |
sweat gland placode | 1.35e-13 | 2 |
sebaceous gland placode | 1.35e-13 | 2 |
skin epidermis | 1.78e-10 | 15 |
outer epithelium | 1.78e-10 | 15 |
enveloping layer of ectoderm | 1.78e-10 | 15 |
surface structure | 4.09e-10 | 99 |
gingival epithelium | 6.84e-10 | 3 |
amnion | 6.39e-09 | 7 |
mouth mucosa | 2.07e-08 | 13 |
epididymis | 4.07e-08 | 1 |
head | 4.14e-08 | 56 |
somatic layer of lateral plate mesoderm | 7.31e-08 | 8 |
mammary gland | 8.53e-08 | 4 |
mammary bud | 8.53e-08 | 4 |
mammary ridge | 8.53e-08 | 4 |
mammary placode | 8.53e-08 | 4 |
jaw skeleton | 9.11e-08 | 4 |
splanchnocranium | 9.11e-08 | 4 |
mouth | 1.07e-07 | 29 |
stomodeum | 1.07e-07 | 29 |
ectoderm-derived structure | 2.24e-07 | 171 |
ectoderm | 2.24e-07 | 171 |
presumptive ectoderm | 2.24e-07 | 171 |
anterior region of body | 3.47e-07 | 62 |
craniocervical region | 3.47e-07 | 62 |