FFCP PHASE1:Hg19::chr4:82136518..82136527,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5593 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9416 | |||
|TSSclassifier=weak | |||
|UniProt=E7EPE6 | |||
|association_with_transcript=-300bp_to_ENST00000418486,uc011cch.1_5end | |||
|coexpression_cluster_id=C124 | |||
|description=CAGE_peak_5_at_PRKG2_5end | |||
|id=chr4:82136518..82136527,- | |||
|ontology_enrichment_celltype=CL:0002274!1.21e-10!5;CL:0000457!1.21e-10!5;CL:0002191!1.21e-10!5;CL:0000097!1.21e-10!5;CL:0000831!1.21e-10!5;CL:0002028!1.21e-10!5;CL:0002582!2.20e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.35e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.49e-09,5;CL:0002028,3.49e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:9119!6.24e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!3.20e-09!32;UBERON:0001950!8.16e-09!20;UBERON:0001893!1.26e-08!34;UBERON:0002619!5.36e-08!22;UBERON:0002079!4.18e-07!1;UBERON:0000956!5.24e-07!25;UBERON:0000203!5.24e-07!25;UBERON:0002780!5.37e-07!41;UBERON:0001890!5.37e-07!41;UBERON:0006240!5.37e-07!41;UBERON:0007029!5.57e-07!1;UBERON:0002791!6.31e-07!33;UBERON:0003080!8.30e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.56e-71;4!UBERON:0000160;1.20e-20;17!UBERON:0005409;2.31e-16;22!UBERON:0002114;1.50e-14;2!UBERON:0004921;1.58e-09;33!UBERON:0001871;6.21e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.56e-71,4;UBERON:0000160,1.20e-20,17;UBERON:0005409,1.41e-14,25;UBERON:0002114,1.60e-14,2;UBERON:0001871,6.04e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,1.00883967391873,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.246381468041427,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,3.55001127296545,15.0806096747731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@PRKG2 | |||
}} |
Revision as of 01:53, 22 January 2014
Short description: | p5@PRKG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRKG2_5end |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | -300bp_to_ENST00000418486, uc011cch.1_5end |
EntrezGene: | PRKG2 |
HGNC: | 9416 |
UniProt: | E7EPE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.49e-09 | 5 |
basophil mast progenitor cell | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.56e-71 | 4 |
intestine | 1.20e-20 | 17 |
gastrointestinal system | 1.41e-14 | 25 |
duodenum | 1.60e-14 | 2 |
temporal lobe | 6.04e-07 | 6 |