FFCP PHASE1:Hg19::chr5:58334931..58334942,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |||
|TSSclassifier=weak | |||
|UniProt=Q08499 | |||
|association_with_transcript=396bp_to_ENST00000358923,NM_001197221,NM_001197222,uc003jrt.2_5end | |||
|coexpression_cluster_id=C1762 | |||
|description=CAGE_peak_33_at_PDE4D_5end | |||
|id=chr5:58334931..58334942,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000623;8.77e-18;3!CL:0000767;4.42e-17;3!CL:0000791;2.34e-10;18!CL:0000789;2.34e-10;18!CL:0002419;2.34e-10;18!CL:0002393;2.67e-08;6!CL:0002397;2.67e-08;6!CL:0000625;3.57e-08;11!CL:0000226;4.55e-08;3!CL:0000842;4.55e-08;3!CL:0000084;2.76e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,9.06e-18,3;CL:0000825,9.06e-18,3;CL:0000767,3.03e-17,3;CL:0000791,2.45e-10,18;CL:0000789,2.45e-10,18;CL:0002420,2.45e-10,18;CL:0002419,2.45e-10,18;CL:0000790,2.45e-10,18;CL:0000625,3.41e-08,11;CL:0000226,4.40e-08,3;CL:0000842,4.40e-08,3;CL:0000738,9.49e-08,136;CL:0000084,2.85e-07,25;CL:0000827,2.85e-07,25;CL:0000838,4.75e-07,52;CL:0000542,6.89e-07,53;CL:0000051,6.89e-07,53;CL:0000094,9.61e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;2.34e-10;18!UBERON:0000358;7.38e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;2.61e-11;2!UBERON:0003978;7.98e-08;3!UBERON:0000946;7.98e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,1.38e-11,2;UBERON:0003978,5.25e-08,3;UBERON:0009751,5.25e-08,3;UBERON:0000946,5.25e-08,3;UBERON:0002523,5.25e-08,3;UBERON:0005983,5.25e-08,3;UBERON:0002165,5.25e-08,3;UBERON:0002062,5.25e-08,3;UBERON:0007280,5.25e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,11.8987113410136,1.70297735647684,0,0,0,0,0,0,1.66198622559563,1.60435557976113,1.95309783644267,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0.344745680736619,0,0,0.564727018627814,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0.393419540227666,1.17903228824749,2.2616164889946,0,0.32592226663359,0,0,0.668462741311041,0.883817722424512,0.886135578334485,0.541607727530031,0.128091319725675,0.260118695119756,0.164437904603676,0.829050053357545,1.15921234294021,0.296573126324121,0.535081656179426,1.04535523804977,0.226618685395132,0.383220493601921,0.68725489096526,0.759059076058509,0,0,0,0.301150238155546,0,1.24930726552346,0,0,5.84659555351724,3.20928234940209,2.89648807765598,0,0,0,0.722878304769133,0,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0,0.302714855289863,0,0.234321431833797,0,0,0.298897361103602,0.352303495931295,0.323745888736263,0,0.408308342509787,0,1.13658359293342,2.37600571456411,0.494533858557114,0,0,0,0,0,0.877955241761676,0,0.901428353439581,0,0.358779271377724,0.213557388818567,0,0,0.309157587715317,0,0,0,0,0,0.184099797284599,0.323292113637624,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,1.71072446022705,0,0,0,0,0.43596006883328,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.857867961948885,1.08524321078289,0,0.65147236858747,0.355391948742546,2.37585561880029,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.537182889719687,0,7.48716888767323,5.82194452120697,4.10697716095195,0,0,0,0,0,0,0,0.414415513436035,0.736148950314839,0,0,0,0.178428988797162,0,0,0.601892199455438,0,2.0694614258501,0,0.368738337083406,0.0868836144680828,0,0,1.6541442089831,0.647142602455851,2.24127871387233,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0.386682873168488,0.462145851343933,0.460511024178389,0.413509717453592,1.28904293841928,0.290033387828457,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0,0.255897791311334,0,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0.731140468893853,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0,0,0,0.844430541190656,0.329294892959902,0,1.04980416073495,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.242721043499027,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,1.26675244876796,0,0,0,0,0,0.311039587661807,0,0.179021174675609,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0.46112780877612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0.432777279484182,0,0.0884575645033392,0,0.593042257361244,0.123563938946503,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.252746318513952,0,0,0.664653872707185,0.330991955875499,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.225980740780532,0,0,0,0.586654148204409,0,0.213452994739353,0,0,2.63434171181606,0,0.288109595976299,0,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,1.95497680890578,0.229160424011684,1.43574604915363,0,0,0.446342914883745,0.0671834724867263,0,0,0,0,0,0.196854963029498,0,0.795229689809303,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0.662091970365432,0.5085370753095,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0.513260513652988,0,0.213574825135389,0.471612915298998,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0,0.447764408660622,0,0,0,0.251567901752575,0,0.915360273587694,0.453692771289717,0.310874401165561,0,0.159296767163702,0,0.310525913752519,0,0,0.521745061811734,0.300515217994437,0,0,0,0.429642228169954,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0.489473409012935,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0.655219697692825,0,0,0.39997479170986,0.106691729694141,0.516644938982447,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0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| |||
|short_description=p33@PDE4D | |||
}} |
Revision as of 05:32, 22 January 2014
Short description: | p33@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_PDE4D_5end |
Coexpression cluster: | C1762_Basophils_Natural_CD8_heart_Peripheral_CD4_CD14 |
Association with transcript: | 396bp_to_ENST00000358923, NM_001197221, NM_001197222, uc003jrt.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | Q08499 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 9.06e-18 | 3 |
pro-NK cell | 9.06e-18 | 3 |
basophil | 3.03e-17 | 3 |
mature alpha-beta T cell | 2.45e-10 | 18 |
alpha-beta T cell | 2.45e-10 | 18 |
immature T cell | 2.45e-10 | 18 |
mature T cell | 2.45e-10 | 18 |
immature alpha-beta T cell | 2.45e-10 | 18 |
CD8-positive, alpha-beta T cell | 3.41e-08 | 11 |
single nucleate cell | 4.40e-08 | 3 |
mononuclear cell | 4.40e-08 | 3 |
leukocyte | 9.49e-08 | 136 |
T cell | 2.85e-07 | 25 |
pro-T cell | 2.85e-07 | 25 |
lymphoid lineage restricted progenitor cell | 4.75e-07 | 52 |
lymphocyte | 6.89e-07 | 53 |
common lymphoid progenitor | 6.89e-07 | 53 |
granulocyte | 9.61e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 1.38e-11 | 2 |
valve | 5.25e-08 | 3 |
cardiac mesenchyme | 5.25e-08 | 3 |
cardial valve | 5.25e-08 | 3 |
tunica intima | 5.25e-08 | 3 |
heart layer | 5.25e-08 | 3 |
endocardium | 5.25e-08 | 3 |
endocardial cushion | 5.25e-08 | 3 |
presumptive endocardium | 5.25e-08 | 3 |