FFCP PHASE1:Hg19::chr5:59064649..59064691,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-178bp_to_ENST00000507116_5end | |||
|description=CAGE_peak_2_at_PDE4D_5end | |||
|id=chr5:59064649..59064691,- | |||
|ontology_enrichment_celltype=CL:0002139!7.06e-08!24;CL:0000066!7.39e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.70e-09;24!CL:0000349;5.53e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.35e-09,24;CL:0000349,3.34e-07,19;CL:0000066,3.64e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.69e-13;29 | |||
|ontology_enrichment_disease=DOID:305!1.11e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.04e-09,106;DOID:0050687,6.62e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000477!5.94e-11!286;UBERON:0001007!6.58e-11!155;UBERON:0001555!6.58e-11!155;UBERON:0007026!6.58e-11!155;UBERON:0004921!7.23e-11!129;UBERON:0004185!7.23e-11!129;UBERON:0004119!8.79e-11!169;UBERON:0000925!8.79e-11!169;UBERON:0006595!8.79e-11!169;UBERON:0000077!5.42e-09!130;UBERON:0000481!2.92e-08!347;UBERON:0001737!2.89e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.22e-09;9!UBERON:0001557;9.22e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,5.92e-14,118;UBERON:0001007,3.07e-12,145;UBERON:0001555,3.07e-12,145;UBERON:0007026,3.07e-12,145;UBERON:0004119,1.99e-11,160;UBERON:0000925,1.99e-11,160;UBERON:0006595,1.99e-11,160;UBERON:0001737,9.58e-09,9;UBERON:0001041,1.07e-08,87;UBERON:0008947,1.08e-08,38;UBERON:0003258,1.08e-08,38;UBERON:0005631,4.92e-07,14;UBERON:0000158,4.92e-07,14;UBERON:0005409,6.58e-07,25;UBERON:0000065,8.68e-07,54 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,5.06599756336621,0,0.261185628199839,0.982935746006035,0,65.0955288947913,27.9592996922161,1.8564952944007,1.32558950291166,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,1.60057375499824,0.816002764977012,0,0,0.684372125364421,0.502170558379211,0.229240217243854,0.410502947249729,0.393553906568396,0.393364276848904,0.383829398097213,1.23852898652861,0,0,0,5.11283523829991,2.84338464974843,0.587200878669695,0,0,0.217010870715852,0,0,0,1.01778767145695,0,0.242584061187816,0.929716147622738,0,0,0.28769239232215,0.512321413058201,0,1.37898272294647,0.645484683583826,0,0.941211697713023,0,0.674170453335254,2.44867113896722,0,0,0.659702600373432,0.199463657621632,0,0,0,0.622822248995575,0,0,0,1.81619850790011,0.368277635987565,0,0,0,0,0,0,0,0,0,0,3.51992488922645,3.82297027883492,12.4531295540898,14.0820973446947,6.80673177961221,5.17277195959035,3.96626923670917,0.954053754535364,20.4916668879401,23.4894875748376,22.9363936875137,0,0.560508562981536,0,0.590129310341499,0.786021525498329,0.411202997999018,0.501559486172034,1.62961133316795,1.4203434172042,0,0.334231370655521,0.883817722424512,3.1014745241707,5.1452734115353,0.25618263945135,0.650296737799391,0.493313713811028,0,0.869409257205157,1.77943875794473,1.07016331235885,1.04535523804977,0.679856056185397,0,1.37450978193052,0.253019692019503,0,0.651083453856419,0,0.301150238155546,0.383959833463255,0,0.236777252044017,0,0,0,0,0,2.01210257911091,0.383587685530591,0.361439152384566,0.50133791063589,0.289693037921647,0,0,4.72674085820339,3.32594096193846,6.4119393555982,3.20898734969396,0.364295288292542,0.370784442784429,0,0,0,0.476981248610684,0,0,6.36039703573456,0.860234595106124,4.51282652089873,1.13061588384802,1.67799774483962,3.02629846134074,2.71693456497854,7.49408601591054,4.98072767761394,15.0624275744102,1.61131726843659,3.80136052859256,2.19655851793353,4.41195696415042,1.62028389576352,14.0200573406005,8.30758678716828,7.99541511431588,3.06633274931766,2.84779697870439,3.84723662253855,9.22462922052443,0,0,0,0.25326102332916,0.264818361626438,0,0,0,2.1349799145941,0,0.933633106199299,1.34710672069688,2.94231425604226,14.2275981986236,4.60940739583999,0,0,1.1409436430889,0,0.822041490506354,0.323745888736263,0.140450806702248,1.42907919878425,0.737005903870608,1.75653827998801,0,0.247266929278557,0,0,1.0100166837244,0.500474079487857,0.554128230968366,0,0,0,0.340296549480063,0.358779271377724,0.213557388818567,0,0,0,0,0.37223371266318,0,0,0,0.184099797284599,0,0,0.10075209822764,0,0.57978255948989,0.272746120590835,0.286804595389004,0,0.265059536642971,0.116193942869518,0.414644220061482,0.756962552626885,0,0,0.643240938192885,0,0.928735856063958,0,16.9178724056977,19.3872393589817,17.3527941516107,18.4190934463098,14.3800433100988,16.6089433377768,15.2359378220986,16.2863816054037,13.4661504931237,8.11971000087113,1.40241773803446,0.4115740113314,0,0,1.96565443335525,10.6342183202653,0,0.122988438543114,3.60292401626904,0.109750285408626,0,0.201057944823262,0.648119116109707,0,0,2.88662684050547,0.927443239800615,1.99594780200897,1.29929802984966,3.70388410061289,2.85381228351897,0,0,0,0,0,0,1.17587489739202,0.283550194484773,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0,1.58744735730423,2.67391897890794,3.51652341630141,1.71072446022705,3.18765227380303,2.70308752059526,11.7188837378537,1.56983518083505,1.74384027533312,1.68678057388185,13.4442584388089,0,0.845302752556,1.86156681609409,0,0,0,0,9.57952557509589,15.7360265563518,1.64648067356154,0.325736184293735,4.26470338491055,3.95975936466715,0.301439377059586,0,0,0,0,0,0,0,0,0.434343920002738,0,0.895304816199478,0,0.394061520403854,0,0.128343036279748,0.254094624222463,0,0.773288812777695,1.50764638800914,0,7.49007023947182,5.9832291840805,13.2612964299531,2.33113834266366,0.500170521059677,0.813795071099207,0,0,0,0,0.601892199455438,0,0,0,0,0.173767228936166,0.979005787313703,1.71571711905428,1.03384013061444,0.862856803274467,0.426910231213777,5.45629628603267,14.9791895559447,12.3980020265169,0.248107807818777,0,0,0,0,0.321707842287215,0,0.462629081407967,0,0.328508624055237,0,0.116210378459959,0,0.40101294060657,0.460404944679482,1.49258782613989,0,0.786746489756545,0,0,0,0,0.211103257785751,0,2.2112181685947,1.51141141271498,4.62681758070868,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,3.91555844261345,1.28197250745681,2.55779449753823,1.14853107599234,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.827019434907183,1.93356440762893,0.580066775656914,0.340906509664404,1.4245125703478,0,0.192190067365106,4.21121951232128,0.6069466851333,0,0.31481234683064,1.3940745403212,0.616067160352178,0,0,2.96518750566272,0.429374660225974,5.21021717103534,0.632758849437452,4.19386426632415,0.255897791311334,0,0,0.78494864019923,5.93579110024939,11.5305552489143,9.5428045900006,0.202182481573316,0,1.26377536871694,0,0.243713489631284,0,2.04749867111979,5.37340641424108,1.13008116620243,0.551365343546124,0,0.438450885253763,0,1.31178950409327,1.42037263873893,1.8589409885985,0.845086807596724,2.29458163526482,0.294747123039363,0.35667105148125,0.709522128141196,0,0,0.75894634753143,0.349934720244983,0.384888450902048,0,1.08890984861323,3.67160823029439,0,0,0.886860307073351,0.459446800413919,0.507447609232169,0.764637207142375,2.27858874869665,4.76463550915578,4.52498500394814,0,2.16012574895246,0.79312517629427,0,0,0.490080431962063,0,0,0,0,0,0.5745161103971,0,0,5.61594356226918,0,0,0,3.55512733383367,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,6.17563783347125,2.78365540616599,0.606802608747567,0,0,2.3874448473769,24.648068509109,5.52889263778618,0,0.844016498463076,3.00533503561846,0,3.58913193817589,2.78947183551498,5.52567831062295,19.146888836925,1.94310496754094,0,0,0.718946809178615,30.2545785201779,0,10.7521312144258,0,0,0,0.371072392647405,0,0.520855522170466,0.262379999988587,4.34999745260876,1.82069517256799,15.0009653672732,9.45550727071745,0.689486746482929,2.04123229368278,4.68787486319889,0,1.5677537021303,0,0.110579259931225,0,0.438770794307945,64.9273242573181,2.78847488557207,12.0042403265923,0,0,0,0,4.78501739597879,1.37396390102793,4.79731298416771,0,0,0.166211681900156,0,0,0,0,0,1.68798451622422,0.163232808159148,0,37.0024573958976,13.9336670350991,10.5264501758974,3.66618086960175,0,0,0.104421949505455,0.539209063845416,6.42062117839031,0.937057782901357,2.55436704901932,2.93496928398135,0,12.2321164883311,8.46935012340647,3.0607276163049,0.947798694427319,1.9542044523884,4.45859223008163,1.32930774541437,0,1.2557316736289,2.38944859545918,0,0.138674673013139,0.173559738335131,0.979923974143776,0.0870592065804026,3.31980669659857,0,18.9642409326607,22.2191523942004,16.4230914106418,2.13375836274523,0,2.71176888936639,0.822251547880505,1.39100228192093,0.443175571691151,3.71547627196126,2.72539988855215,8.1112138000954,4.99524023955326,6.62815918908888,0.687219576995494,7.89336990165037,7.77895909136008,0.124252535565433,60.5733668965164,10.4646238676683,9.83266755335932,0.509991088181609,0.288950589901519,1.80126086612937,1.36905378891993,0,1.28929632425987,0,3.0721064139948,0.687481272035051,4.30723814746088,0.399358000997982,1.28767814440971,0.223171457441873,5.57622821639828,0,0,0.315132729228895,0.412079291905832,0.337017719270924,12.3034351893436,0.0846733320657845,0,0.953423842781029,0.482259445395058,0.275078873194468,0,0,1.5476039091159,0.91124334987037,0.335434687599266,1.41850273138557,10.5958268032696,6.33602019116439,5.37862017998534,0.959575986597226,0.714695326373367,0,0,0,1.72844298240254,0,1.19730191562487,0,2.3854323049959,16.9968137280189,3.81035807563014,14.5757577803443,0.129282956361551,0.52893040697076,23.4388967901531,3.52407511158336,1.9221734262185,18.5501080017606,2.89967338743037,3.47316215268366,0,1.33971858218986,3.83004754662109,0,0,0,0.327872630709804,10.8367326412662,0.886068179966986,0.732157589411779,0.876336514945499,0.573409195690071,0.554645257684261,0.496771223531068,9.26935854072747,1.12482367165896,2.12308764558307,1.99825733481477,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0,0.686520205190771,0.151230923763239,0.310874401165561,0.295710299979268,0.477890301491107,0.899606224327209,1.24210365501008,0.829412415681711,1.59505028734797,3.65221543268214,4.50772826991655,1.14241563650639,3.25496586563729,1.09109195521536,3.43713782535963,0,2.78667122089031,0.400027764663154,0,0,0,3.27453711692416,0.428883182749851,0,2.94717703165954,0.463044948647668,0,0.358177682162975,0.926404341482917,1.31570429747224,0.176689145945881,0,0,0,0.345430341731199,0,0.967809053062115,0.194860308839388,0.132864840313363,0,0.982829546539238,4.17813944881323,0,1.19992437512958,0.533458648470704,0,0,2.02516545277025,0.279759015438889,5.59869534029676,0,0,0.629063767423586,0.436838552768056,0,4.25149840203366,0.123935764259002,0.558644917973244,0,0,0,0,0.6124909547064,1.41304295212211,1.41696576325585,1.27707087245721,0.41023272848151,6.30179240554295,0.207471757392654,1.13032951942296,0,3.14072699203282,0.825788063434183,0.366857197043358,1.73288499225507,0.762764190934334,0,0,2.40673050717623,0.80682027481408,0,0,1.47394725759087,0.443568258651136,0.607838261565552,2.34323429584154,2.06686796501184,0.697573912132975,2.18789923607288,0,3.96968942711435,2.81393990975393,1.02209942111676,3.21421101526972,0.672567444437648,1.82089681270989,5.46389259243114,2.30626162422861,0.691403925334676,4.6301762548103,0.475788130837822,0.263091094251396,0,4.6717188794669,10.8320468133709,1.88538707899202,1.12108865325516,22.8289680127374,1.51149313853035,21.9765776428043,5.93255316666248,0,1.16241425368125,2.60787408453869,0,1.24329698497822,9.2187977630733,0.691259661814092,0.430227358820278,0.709992004383392,1.19298766662821,12.7016115057279,0.4582137370881,9.92660434125824,13.3775451456841,0,1.57040373784389,4.51096322434397,0,0.410651227424988,4.6392577253528,1.45713297917742,11.2290942461811,5.17272015419557,2.2594817247738,9.14863264515576,5.49702583727146,12.2279903289006,2.77826969188601,3.27839340755936,14.5798361872072,14.4637509834804,16.7330348442154,1.96308467114945,0.891139200981258,4.226557275834,0,0.845855261818682,4.76988371004471,3.0981758336728,0.892769693028288,0,4.41327516790425,9.49437304720472,0.458729283404541,1.57673541466596,5.20646155237509,0.0679914901909147,2.61810414204226,13.225671012885,0,0,0,3.40649347054713,0.98339014767326,0.253397002022874,0.305966489225945,0,0,0,1.36401656792831,0.267964130156178,2.48750831837634,0.310298987585686,2.77204176471275,5.23741749220229,0.322944549180031,1.1794195716213,1.34558235096736,1.14564884900697,10.9143282037438,2.39488422686657,3.42233301085281,7.61078199064839,9.03699787947722,7.98384855710432,7.81471378665355,0.106727345877715,1.9307228228694,12.1264022843892,16.4248659682418,26.1596690551334,3.25516942652591,8.65483806441166,2.81783311027437,0 | |||
|short_description=p2@PDE4D | |||
}} |
Revision as of 05:34, 22 January 2014
Short description: | p2@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PDE4D_5end |
Coexpression cluster: | NA |
Association with transcript: | -178bp_to_ENST00000507116_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.35e-09 | 24 |
extraembryonic cell | 3.34e-07 | 19 |
epithelial cell | 3.64e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 5.92e-14 | 118 |
digestive system | 3.07e-12 | 145 |
digestive tract | 3.07e-12 | 145 |
primitive gut | 3.07e-12 | 145 |
endoderm-derived structure | 1.99e-11 | 160 |
endoderm | 1.99e-11 | 160 |
presumptive endoderm | 1.99e-11 | 160 |
larynx | 9.58e-09 | 9 |
foregut | 1.07e-08 | 87 |
respiratory primordium | 1.08e-08 | 38 |
endoderm of foregut | 1.08e-08 | 38 |
extraembryonic membrane | 4.92e-07 | 14 |
membranous layer | 4.92e-07 | 14 |
gastrointestinal system | 6.58e-07 | 25 |
respiratory tract | 8.68e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.04e-09 | 106 |
cell type cancer | 6.62e-07 | 143 |