FFCP PHASE1:Hg19::chr5:153570285..153570308,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55568 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19873 | |||
|TSSclassifier=strong | |||
|UniProt=Q86SR1,F2Z2M7 | |||
|association_with_transcript=0bp_to_ENST00000297107,ENST00000425427,ENST00000520647,ENST00000521786,NM_198321,uc003lvg.1,uc003lvh.2,uc010jic.2_5end | |||
|description=CAGE_peak_1_at_GALNT10_5end | |||
|id=chr5:153570285..153570308,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.09e-16!180;CL:0000222!5.10e-12!119;CL:0002371!6.72e-10!591;CL:0000057!2.42e-09!75;CL:0000359!7.49e-09!32;CL:0000144!1.04e-08!625;CL:0000680!2.71e-08!57;CL:0000056!2.71e-08!57;CL:0000355!2.71e-08!57;CL:0000192!8.22e-08!42;CL:0000514!8.22e-08!42;CL:0000187!1.12e-07!54;CL:0000048!3.79e-07!430;CL:0000183!4.79e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.21e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.02e-12,121;CL:0000057,8.52e-10,76;CL:0000359,7.49e-09,32;CL:0000680,3.06e-08,58;CL:0000056,3.06e-08,58;CL:0000355,3.06e-08,58;CL:0000192,9.80e-08,43;CL:0000514,9.80e-08,43;CL:0000048,1.10e-07,427;CL:0000187,1.25e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.49e-14!110;UBERON:0001009!2.82e-13!113;UBERON:0002049!3.30e-12!79;UBERON:0007798!3.30e-12!79;UBERON:0004872!4.82e-11!84;UBERON:0001637!8.92e-10!42;UBERON:0003509!8.92e-10!42;UBERON:0004572!8.92e-10!42;UBERON:0003914!1.11e-09!118;UBERON:0001981!2.25e-09!60;UBERON:0007500!2.25e-09!60;UBERON:0004537!2.25e-09!60;UBERON:0006965!2.25e-09!60;UBERON:0000055!2.33e-09!69;UBERON:0004573!3.73e-08!33;UBERON:0004571!3.73e-08!33;UBERON:0000490!4.61e-07!138;UBERON:0002385!6.21e-07!63;UBERON:0001015!6.21e-07!63;UBERON:0000383!6.21e-07!63;UBERON:0001134!9.86e-07!61;UBERON:0002036!9.86e-07!61;UBERON:0003082!9.86e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.95e-08;42!UBERON:0003509;8.95e-08;42!UBERON:0004572;8.95e-08;42!UBERON:0004573;1.85e-07;33!UBERON:0004571;1.85e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.05e-13,109;UBERON:0001009,8.15e-13,112;UBERON:0002049,1.03e-11,78;UBERON:0007798,1.03e-11,78;UBERON:0004872,1.40e-10,83;UBERON:0001637,8.92e-10,42;UBERON:0003509,8.92e-10,42;UBERON:0004572,8.92e-10,42;UBERON:0003914,1.07e-09,117;UBERON:0000055,6.68e-09,68;UBERON:0007500,6.76e-09,59;UBERON:0001981,6.76e-09,59;UBERON:0004537,6.76e-09,59;UBERON:0006965,6.76e-09,59;UBERON:0004573,3.73e-08,33;UBERON:0004571,3.73e-08,33;UBERON:0002385,6.66e-07,64;UBERON:0001015,6.66e-07,64;UBERON:0000383,6.66e-07,64 | |||
|phase1_expression=57.4103678494959,59.0917445939113,63.1475730349951,60.0439790118782,44.6961094427288,51.4679729219218,30.3959853801973,16.4247167090976,6.00726944859629,49.8839891098063,31.4010525587592,76.6729216176905,76.75619066448,11.7578035312044,20.8780346708587,41.0118339335583,50.0236458259901,57.6944971406025,70.7502558246235,22.7773957442058,30.6001036866379,39.181840184761,33.7758464814647,48.3166720507281,38.16496243682,18.1863905680124,16.3380173005392,13.8530975112075,34.6160563627036,50.2816511507349,28.3313505668419,9.19421224478927,18.3735610454733,12.5716363456708,12.0848832905271,15.7807848061038,9.10161361938026,23.8218025668707,34.0925560699241,26.0413044859022,14.3305903513552,17.8141516310439,17.5151385991247,11.0502661472469,9.44689859222024,13.8272914877055,8.13501629169896,8.63452564845834,15.4853185447552,14.3846196161075,16.6504459243915,9.45928919554341,7.58440497620561,14.2006630388442,20.3139729891513,8.65914761895982,13.6453075028923,8.53949240891322,10.1007684482398,14.7627352455003,15.344091019177,12.8642007072819,21.3426113655146,17.0489900213078,11.0279510678862,9.64554881974938,11.8336227309159,14.3211739196344,19.8163508999677,11.7281976140763,12.1079900526674,11.0483290796269,8.86094684834476,15.2103806144598,16.1579267973433,11.1119082119439,12.019163532675,7.50884464207532,14.7867539761314,17.3857773682162,19.6927510427099,14.7957964549353,22.879511779972,20.2071286166989,24.9062591081795,22.6167017960249,21.6213832999447,25.8638597979517,21.8144808019005,24.8053976179195,21.0608798570496,28.774622279176,24.4654866000146,10.5737062863221,11.2101712596307,13.9593564930791,31.6702729883271,35.3709686474248,30.2234203529279,18.0561415021932,10.7554347989085,7.57516489175573,5.84480185223734,17.1572103603167,15.9087190036412,14.621237042519,18.143858872256,26.7710858226661,28.3529377680535,10.8529017038426,9.119550586933,6.0858648004361,10.8249191108304,11.7717964359474,3.1360657141493,16.0899266630544,18.7778041864941,16.8377448286489,16.1932602892482,18.7953594451217,18.8814201618361,18.0585888445191,12.7988851216107,15.9983263943023,21.2382235138988,23.2041707003137,22.9915839137893,64.5141578319144,70.0693312952789,53.8746782444012,41.4471672733735,19.4503249314054,29.0248015384814,22.4092274478431,35.0936537445123,34.1837784747544,59.6464460288324,76.4016746375138,49.9143834626278,51.4412202113148,46.6402712030499,16.1759158239675,8.37879163072847,10.381964397964,7.14004266040303,5.74628133087582,5.98310822334893,9.77811559651902,17.1598473234038,10.4008100372278,22.261389625071,20.645630282547,49.641091729886,35.0490923992886,32.7209560243727,25.5859779004263,26.1243708171013,25.0664256394249,40.557353946285,32.8026200509377,18.9329779041299,17.4862584315258,26.6027642727505,16.1771755352182,39.6969554462062,18.6636432113727,21.7793491447385,22.1844616552145,18.397996495906,16.1375162126582,24.9154371745354,31.6273001846552,73.6782501881818,9.15797509499322,108.836857421275,46.3467672692362,37.3393889893277,50.4832452517912,54.2642624763486,51.0216616129499,25.6197589751292,85.3469717523373,28.3202042213787,26.6727130697982,17.1634998269132,48.8884491293128,42.6370184115199,13.5906430463602,9.67696238173994,10.8389646093445,9.86361291641887,16.3233953114833,14.4066920487637,12.7810234099046,22.865267180548,12.2834317311768,21.0784593598562,16.6320400019487,15.083282685992,29.1251635820168,40.2426159417094,14.1402335721416,13.888155705788,16.9009110445352,21.9488810440419,36.7785354958824,19.380709598951,27.3371561415651,30.8550173384843,29.8980344345994,33.4852403832108,45.0136644126603,28.8547081867629,28.8557404851105,52.6710703418399,79.8312051501189,48.9133765909217,24.9909436501673,35.2551111800006,23.1153861250901,54.6714772475586,48.2602550510397,38.6598150467912,14.4945639872473,22.6379280090393,16.3478619371732,3.41526377162867,6.75901818439575,4.53156377191122,6.94529068602982,5.80337957013945,6.93456982244077,26.5964204960687,48.2430703644664,46.9658732598434,44.57932109107,33.2064561568009,5.67872640191251,6.57480291304597,7.23033089650446,5.4044046638873,5.22910665821775,5.21995362044413,4.85392709376592,3.92442930250692,2.69323009862473,14.0249536378683,23.8411015465858,40.7458271218086,44.1026134156626,11.4079531339648,6.87979051674338,5.31710916013264,9.27072508770766,7.50229475112993,41.3478422819447,11.4140296824971,12.3641928583382,9.34919443428167,10.3699058577553,12.054907296482,27.038304417269,34.6395220860656,35.4747039223735,98.2710770753827,23.387364537294,12.9635943521451,11.2249949818413,17.3844967551041,11.1603201072333,16.742756413943,10.9982004615442,13.0795422814081,11.2480600784132,44.1792997163001,16.4459112801168,19.0759653357067,7.84711633987697,8.81780162079986,13.3019074231905,16.7292024625129,17.4155617054249,12.8266758541096,11.9930311755061,11.1121315011296,8.78573378784039,7.03304683260282,23.9501424431787,5.86116708408944,2.10240140490742,5.14487578735041,23.6596587968711,33.1329652313293,27.5751954686772,42.918209631582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| |||
|short_description=p1@GALNT10 | |||
}} |
Revision as of 08:36, 22 January 2014
Short description: | p1@GALNT10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GALNT10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000297107, ENST00000425427, ENST00000520647, ENST00000521786, NM_198321, uc003lvg.1, uc003lvh.2, uc010jic.2_5end |
EntrezGene: | GALNT10 |
HGNC: | 19873 |
UniProt: | Q86SR1F2Z2M7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.02e-12 | 121 |
fibroblast | 8.52e-10 | 76 |
vascular associated smooth muscle cell | 7.49e-09 | 32 |
muscle precursor cell | 3.06e-08 | 58 |
myoblast | 3.06e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.06e-08 | 58 |
smooth muscle cell | 9.80e-08 | 43 |
smooth muscle myoblast | 9.80e-08 | 43 |
multi fate stem cell | 1.10e-07 | 427 |
muscle cell | 1.25e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.05e-13 | 109 |
circulatory system | 8.15e-13 | 112 |
vasculature | 1.03e-11 | 78 |
vascular system | 1.03e-11 | 78 |
splanchnic layer of lateral plate mesoderm | 1.40e-10 | 83 |
artery | 8.92e-10 | 42 |
arterial blood vessel | 8.92e-10 | 42 |
arterial system | 8.92e-10 | 42 |
epithelial tube | 1.07e-09 | 117 |
vessel | 6.68e-09 | 68 |
epithelial tube open at both ends | 6.76e-09 | 59 |
blood vessel | 6.76e-09 | 59 |
blood vasculature | 6.76e-09 | 59 |
vascular cord | 6.76e-09 | 59 |
systemic artery | 3.73e-08 | 33 |
systemic arterial system | 3.73e-08 | 33 |
muscle tissue | 6.66e-07 | 64 |
musculature | 6.66e-07 | 64 |
musculature of body | 6.66e-07 | 64 |