FFCP PHASE1:Hg19::chr6:17707083..17707173,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9972 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8062 | |||
|TSSclassifier=strong | |||
|UniProt=P49790,Q4LE47 | |||
|association_with_transcript=-265bp_to_ENST00000430136,NM_005124,uc003ncd.1,uc010jpl.1,uc011dje.1_5end | |||
|description=CAGE_peak_1_at_NUP153_5end | |||
|id=chr6:17707083..17707173,- | |||
|ontology_enrichment_celltype=CL:0000037!8.08e-26!172;CL:0000566!8.08e-26!172;CL:0002032!2.02e-24!165;CL:0000837!2.02e-24!165;CL:0000988!8.62e-23!182;CL:0000738!2.80e-17!140;CL:0002031!7.77e-15!124;CL:0002087!1.10e-13!119;CL:0000763!4.17e-13!112;CL:0000049!4.17e-13!112;CL:0000542!1.96e-11!53;CL:0000051!1.96e-11!53;CL:0000860!3.24e-11!45;CL:0000838!4.15e-11!52;CL:0002057!5.06e-11!42;CL:0000945!1.75e-07!24;CL:0000826!1.75e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.23e-11;33!CL:0002057;7.23e-11;33!CL:0000945;1.67e-07;24!CL:0000542;2.66e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.51e-26,168;CL:0002032,8.79e-25,161;CL:0000837,8.79e-25,161;CL:0000988,1.41e-23,177;CL:0000738,1.38e-17,136;CL:0002031,3.87e-15,120;CL:0002087,5.64e-14,115;CL:0000763,2.10e-13,108;CL:0000049,2.10e-13,108;CL:0000542,1.96e-11,53;CL:0000051,1.96e-11,53;CL:0000838,4.15e-11,52;CL:0000860,5.06e-11,42;CL:0002057,5.06e-11,42;CL:0000945,1.75e-07,24;CL:0000826,1.75e-07,24;CL:0000473,4.39e-07,48;CL:0000234,4.39e-07,48;CL:0000766,6.36e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.27e-08;42!CL:0000051;2.66e-07;53 | |||
|ontology_enrichment_disease=DOID:162!1.64e-10!235;DOID:14566!1.35e-09!239;DOID:2531!8.14e-09!51;DOID:0060083!8.14e-09!51;DOID:1240!5.91e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.64e-10,235;DOID:14566,1.35e-09,239;DOID:2531,8.14e-09,51;DOID:0060083,8.14e-09,51;DOID:1240,5.91e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.41e-07!102;UBERON:0003061!5.41e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.85e-07,98;UBERON:0003061,3.85e-07,98 | |||
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| |||
|short_description=p1@NUP153 | |||
}} |
Revision as of 10:18, 22 January 2014
Short description: | p1@NUP153 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NUP153_5end |
Coexpression cluster: | NA |
Association with transcript: | -265bp_to_ENST00000430136, NM_005124, uc003ncd.1, uc010jpl.1, uc011dje.1_5end |
EntrezGene: | NUP153 |
HGNC: | 8062 |
UniProt: | P49790Q4LE47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.51e-26 | 168 |
hematopoietic oligopotent progenitor cell | 8.79e-25 | 161 |
hematopoietic multipotent progenitor cell | 8.79e-25 | 161 |
hematopoietic cell | 1.41e-23 | 177 |
leukocyte | 1.38e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 3.87e-15 | 120 |
nongranular leukocyte | 5.64e-14 | 115 |
myeloid cell | 2.10e-13 | 108 |
common myeloid progenitor | 2.10e-13 | 108 |
lymphocyte | 1.96e-11 | 53 |
common lymphoid progenitor | 1.96e-11 | 53 |
lymphoid lineage restricted progenitor cell | 4.15e-11 | 52 |
classical monocyte | 5.06e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.06e-11 | 42 |
lymphocyte of B lineage | 1.75e-07 | 24 |
pro-B cell | 1.75e-07 | 24 |
defensive cell | 4.39e-07 | 48 |
phagocyte | 4.39e-07 | 48 |
myeloid leukocyte | 6.36e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.85e-07 | 98 |
blood island | 3.85e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.64e-10 | 235 |
disease of cellular proliferation | 1.35e-09 | 239 |
hematologic cancer | 8.14e-09 | 51 |
immune system cancer | 8.14e-09 | 51 |
leukemia | 5.91e-07 | 39 |