FFCP PHASE1:Hg19::chr6:31926208..31926226,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7936 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13974 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=4bp_to_uc003nyl.1_5end | |||
|description=CAGE_peak_2_at_RDBP_5end | |||
|id=chr6:31926208..31926226,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;5.06e-13;1!CL:0002625;5.06e-13;1!CL:0000216;5.06e-13;1!CL:0000097;2.71e-10;5!CL:0002363;3.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.95e-13,1;CL:0002625,2.95e-13,1;CL:0000216,2.95e-13,1;CL:0000097,4.12e-10,5;CL:0002028,4.12e-10,5;CL:0002363,5.28e-07,2;CL:0000008,5.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010226;5.06e-13;1!CL:0000008;3.81e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;3.81e-07;2!DOID:4236;3.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,2.74e-07,2;DOID:4236,2.74e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;5.06e-13;1!UBERON:0001136;5.06e-13;1!UBERON:0001343;5.06e-13;1!UBERON:0002082;5.06e-13;1!UBERON:0004910;5.06e-13;1!UBERON:0004813;5.06e-13;1!UBERON:0003566;3.81e-07;2!UBERON:0004909;3.81e-07;2!UBERON:0001777;3.81e-07;2!UBERON:0000473;9.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.95e-13,1;UBERON:0001343,2.95e-13,1;UBERON:0004910,2.95e-13,1;UBERON:0005154,2.95e-13,1;UBERON:0005295,2.95e-13,1;UBERON:0004813,2.95e-13,1;UBERON:0005297,2.95e-13,1;UBERON:0005294,2.95e-13,1;UBERON:0010141,2.95e-13,1;UBERON:0005891,2.95e-13,1;UBERON:0002084,5.38e-13,1;UBERON:0002082,5.38e-13,1;UBERON:0010226,5.38e-13,1;UBERON:0004909,2.91e-07,2;UBERON:0003566,5.28e-07,2;UBERON:0001777,5.28e-07,2;UBERON:0000473,7.44e-07,8 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0.446961094427288,0,2.53299878168311,0,0,0.491467873003018,0,0,0,0,0.331397375727916,0,0,0,0,0,0.408001382488506,0.313454721478088,0.286235987131057,0.136874425072884,0,0,0.0821005894499457,0.157421562627358,0,0.383829398097213,0,0,0,0.739508020333575,0.0774672005803016,0,0,0,0,0,0,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0.329851300186716,0,0.852449501065388,0,0,0.622822248995575,0,0,0.217188844705117,1.21079900526674,0,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.222820913770347,0,0.664601683750863,0,0.512365278902701,0.130059347559878,0.328875809207352,0,0,0.296573126324121,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0.35576626268671,0,0.805658634218294,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0.485618833104395,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0.168336113954066,0,0,0.438977620880838,0.30648779579902,0.150238058906597,0.226864366320042,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0.504867548488229,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,0,0,0,0.487894824518382,0,0,0,0,0,0,0,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0.882926198829301,0.122988438543114,0,0.109750285408626,1.1240175325762,0.100528972411631,0,0,1.03993478527958,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0.088048434013226,0.207328115540772,1.15295962733569,1.00993946741104,0,0,0,0,0.205654985406647,0,0,0,0.43596006883328,0,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0.142977993658148,0,1.64648067356154,0,0,0.791951872933429,0,0,0.199945982364114,0,0,2.10833939483032,0,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0,0,0,0.30239029332968,0.248107807818777,0,0,0,0,0.160853921143607,0,0.154209693802656,0.710246901252508,0.164254312027618,0,0,0.241718899183244,0.601519410909855,0.368323955743585,0.34444334449382,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0.512900250232778,0,0.325378394664303,0,0,0,0,0,1.6068392984416,0.48335359146061,0,0.307007349452259,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.267096106940212,0.165284915360978,0.384380134730212,0,0.2023155617111,0,0,0,0,0.532306030317022,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0.563391205064483,0.143411352204052,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0.764637207142375,0,0,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0.313359791546046,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0,0,0.242721043499027,0.111443384277478,0.568272293612826,0.23874448473769,0,0.307160702099232,0,0,0.222617410045812,0.16480387422676,0,0.19924798825107,0.552567831062295,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.508507300585533,0,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0.21787692703798,0.278847488557207,0.0769502585037971,0.569710279235006,0,0.448788222048861,0.217294743844016,0,0.0915975934018623,0,0,0,0.166211681900156,0.225595660617181,0,0.167821586975843,0,0,0.632994193584081,0,0,0,0,0.353830258013357,0,0,0.123563938946503,0.104421949505455,0,0,0.234264445725339,0.364909578431332,0,0,0.394584402849391,0,0,0.063186579628488,0.751617097072463,0.103688191397247,0,0,0,0,0,0.277349346026277,0,0.195984794828755,0,0.17472666824203,0,0.19351266257817,0,0.164230914106418,0.0969890164884194,0,0,0.274083849293502,0.19871461170299,0.0633107959558787,0.195551382734803,0,0,0.19980960958213,0.144090417154106,0,0.171594997861965,0,0,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0,0.262887354279314,0,0,0.717873024576814,0.399358000997982,0,0,0.0671834724867263,0,0,0.0787831823072236,0.247247575143499,0.0674035438541849,0.393709926058995,0.0846733320657845,0,0,0.482259445395058,0.137539436597234,0.415440338029185,0.449947783103001,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| |||
|short_description=p2@RDBP | |||
}} |
Revision as of 11:10, 22 January 2014
Short description: | p2@RDBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RDBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_uc003nyl.1_5end |
EntrezGene: | RDBP |
HGNC: | 13974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.95e-13 | 1 |
seminiferous tubule epithelial cell | 2.95e-13 | 1 |
Sertoli cell | 2.95e-13 | 1 |
mast cell | 4.12e-10 | 5 |
basophil mast progenitor cell | 4.12e-10 | 5 |
keratocyte | 5.28e-07 | 2 |
migratory cranial neural crest cell | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.95e-13 | 1 |
seminiferous tubule of testis | 2.95e-13 | 1 |
epithelium of male gonad | 2.95e-13 | 1 |
epithelial cord | 2.95e-13 | 1 |
sex cord | 2.95e-13 | 1 |
seminiferous tubule epithelium | 2.95e-13 | 1 |
testis sex cord | 2.95e-13 | 1 |
genital ridge | 2.95e-13 | 1 |
primitive sex cord of indifferent gonad | 2.95e-13 | 1 |
coelomic epithelium | 2.95e-13 | 1 |
heart left ventricle | 5.38e-13 | 1 |
cardiac ventricle | 5.38e-13 | 1 |
future cardiac ventricle | 5.38e-13 | 1 |
epithelium of gonad | 2.91e-07 | 2 |
head connective tissue | 5.28e-07 | 2 |
substantia propria of cornea | 5.28e-07 | 2 |
testis | 7.44e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 2.74e-07 | 2 |
carcinosarcoma | 2.74e-07 | 2 |