FFCP PHASE1:Hg19::chr6:168195926..168195943,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=441179 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt=Q6ZUY9 | |||
|association_with_transcript=-266bp_to_AK125190_5end | |||
|coexpression_cluster_id=C357 | |||
|description=CAGE_peak_1_at_LOC441179_5end | |||
|id=chr6:168195926..168195943,+ | |||
|ontology_enrichment_celltype=CL:0000115!8.42e-27!35;CL:0002139!2.32e-24!24;CL:0002078!2.41e-20!44;CL:0005020!1.13e-14!6;CL:0002138!1.13e-14!6;CL:0005022!1.13e-14!6;CL:0000213!1.20e-14!57;CL:0000215!1.20e-14!57;CL:0000071!2.95e-13!18;CL:0002546!2.95e-13!18;CL:0002144!1.46e-11!3;CL:0002618!5.03e-10!3;CL:0002543!1.62e-08!6;CL:0000666!3.09e-08!4;CL:0002188!3.09e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0002138;7.99e-32;6!CL:0002139;1.43e-17;24!CL:0002144;3.85e-17;3!CL:0000115;1.32e-16;36!CL:0002078;8.33e-13;45!CL:0002188;3.58e-10;5!CL:0000213;1.78e-08;58!CL:0000215;1.78e-08;58!CL:1000746;1.63e-07;7!CL:1000612;1.63e-07;7!CL:0002554;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.05e-31,6;CL:0002138,1.05e-31,6;CL:0005022,1.05e-31,6;CL:0000115,4.12e-20,36;CL:0002139,1.58e-17,24;CL:0002144,3.85e-17,3;CL:0002078,6.25e-16,45;CL:0000213,3.57e-12,58;CL:0000215,3.57e-12,58;CL:0002188,3.76e-10,5;CL:1000746,1.68e-07,7;CL:1000612,1.68e-07,7;CL:0002554,3.93e-07,2 | |||
|ontology_enrichment_development_v019=CL:0005022;7.99e-32;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!4.79e-16!10;UBERON:0001473!1.76e-15!8;UBERON:0004536!1.76e-15!8;UBERON:0006558!1.76e-15!8;UBERON:0001986!2.95e-13!18;UBERON:0004638!2.95e-13!18;UBERON:0004852!2.95e-13!18;UBERON:0001915!1.46e-11!3;UBERON:0001982!1.46e-11!3;UBERON:0000055!2.75e-11!69;UBERON:0000487!1.57e-10!22;UBERON:0002049!2.60e-09!79;UBERON:0007798!2.60e-09!79;UBERON:0006914!4.60e-09!25;UBERON:0001638!1.80e-08!9;UBERON:0003920!1.80e-08!9;UBERON:0004582!1.80e-08!9;UBERON:0004111!5.88e-08!241;UBERON:0000477!7.94e-08!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.14e-36;8!UBERON:0004536;1.14e-36;8!UBERON:0006558;1.14e-36;8!UBERON:0002465;2.33e-29;10!UBERON:0010523;3.85e-17;3!UBERON:0001915;3.85e-17;3!UBERON:0001982;3.85e-17;3!UBERON:0002426;3.76e-13;1!UBERON:0003831;3.76e-13;1!UBERON:0003898;3.76e-13;1!UBERON:0004830;3.76e-13;1!UBERON:0003830;3.76e-13;1!UBERON:0005175;3.76e-13;1!UBERON:0001774;3.76e-13;1!UBERON:0001103;3.76e-13;1!UBERON:0002405;7.18e-11;27!UBERON:0000922;1.52e-08;49!UBERON:0000074;1.63e-07;7!UBERON:0001229;1.63e-07;7!UBERON:0005090;3.28e-07;2!UBERON:0001630;3.28e-07;2!UBERON:0000341;4.55e-07;2!UBERON:0000055;7.46e-07;65!UBERON:0002193;9.30e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.23e-36,8;UBERON:0004536,1.23e-36,8;UBERON:0006558,1.23e-36,8;UBERON:0002465,2.47e-29,10;UBERON:0010523,3.85e-17,3;UBERON:0001915,3.85e-17,3;UBERON:0001982,3.85e-17,3;UBERON:0002426,3.33e-13,1;UBERON:0003831,3.33e-13,1;UBERON:0003898,3.33e-13,1;UBERON:0004830,3.33e-13,1;UBERON:0003830,3.33e-13,1;UBERON:0005175,3.33e-13,1;UBERON:0001774,3.33e-13,1;UBERON:0001103,3.33e-13,1;UBERON:0010084,3.33e-13,1;UBERON:0000055,6.16e-08,68;UBERON:0010532,1.68e-07,7;UBERON:0000074,1.68e-07,7;UBERON:0001229,1.68e-07,7;UBERON:0001230,1.68e-07,7;UBERON:0003220,1.68e-07,7;UBERON:0005749,1.68e-07,7;UBERON:0004199,1.68e-07,7;UBERON:0004209,1.68e-07,7;UBERON:0004198,1.68e-07,7;UBERON:0005090,3.09e-07,2;UBERON:0001630,3.09e-07,2;UBERON:0000341,3.70e-07,2;UBERON:0002049,7.81e-07,78;UBERON:0007798,7.81e-07,78 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0.258416759169329,0,1.00416183829401,8.05658634218294,0.760272105718513,17.5724681434682,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82032272387605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4859250149208,7.40776820122577,4.75635380586496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,2.40773294189637,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65263488203798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0.150962843566674,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,1.46067277649303,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90451545170992,0,0.0620747142958579,0,0.190941474834495,2.22328907854041,0,2.39563310759697,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p1@LOC441179 | |||
}} |
Revision as of 15:12, 22 January 2014
Short description: | p1@LOC441179 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC441179_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | -266bp_to_AK125190_5end |
EntrezGene: | LOC441179 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.05e-31 | 6 |
endothelial cell of lymphatic vessel | 1.05e-31 | 6 |
vascular lymphangioblast | 1.05e-31 | 6 |
endothelial cell | 4.12e-20 | 36 |
endothelial cell of vascular tree | 1.58e-17 | 24 |
capillary endothelial cell | 3.85e-17 | 3 |
meso-epithelial cell | 6.25e-16 | 45 |
lining cell | 3.57e-12 | 58 |
barrier cell | 3.57e-12 | 58 |
glomerular endothelial cell | 3.76e-10 | 5 |
glomerular cell | 1.68e-07 | 7 |
kidney corpuscule cell | 1.68e-07 | 7 |
fibroblast of lymphatic vessel | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.23e-36 | 8 |
lymph vasculature | 1.23e-36 | 8 |
lymphatic part of lymphoid system | 1.23e-36 | 8 |
lymphoid system | 2.47e-29 | 10 |
microcirculatory vessel | 3.85e-17 | 3 |
endothelium of capillary | 3.85e-17 | 3 |
capillary | 3.85e-17 | 3 |
chest muscle | 3.33e-13 | 1 |
respiratory system muscle | 3.33e-13 | 1 |
skeletal muscle of trunk | 3.33e-13 | 1 |
respiratory system skeletal muscle | 3.33e-13 | 1 |
thoracic segment muscle | 3.33e-13 | 1 |
chest organ | 3.33e-13 | 1 |
muscle of trunk | 3.33e-13 | 1 |
diaphragm | 3.33e-13 | 1 |
future diaphragm | 3.33e-13 | 1 |
vessel | 6.16e-08 | 68 |
primitive nephron | 1.68e-07 | 7 |
renal glomerulus | 1.68e-07 | 7 |
renal corpuscle | 1.68e-07 | 7 |
glomerular capsule | 1.68e-07 | 7 |
metanephric mesenchyme | 1.68e-07 | 7 |
glomerular tuft | 1.68e-07 | 7 |
S-shaped body | 1.68e-07 | 7 |
renal vesicle | 1.68e-07 | 7 |
comma-shaped body | 1.68e-07 | 7 |
muscle structure | 3.09e-07 | 2 |
muscle organ | 3.09e-07 | 2 |
throat | 3.70e-07 | 2 |
vasculature | 7.81e-07 | 78 |
vascular system | 7.81e-07 | 78 |