FFCP PHASE1:Hg19::chr7:20180065..20180081,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000428100_5end | |||
|description=CAGE_peak_1_at_ENST00000428100_5end | |||
|id=chr7:20180065..20180081,- | |||
|ontology_enrichment_celltype=CL:0002541!4.51e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.06e-12;3!CL:0002553;3.74e-10;1!CL:0000511;1.91e-09;1!CL:0002625;1.91e-09;1!CL:0000216;1.91e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.22e-12,3;CL:0002553,3.74e-10,1;CL:0000511,1.48e-09,1;CL:0002625,1.48e-09,1;CL:0000216,1.48e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.08e-13;10!UBERON:0009143;1.01e-09;1!UBERON:0003124;1.01e-09;1!UBERON:0006242;1.01e-09;1!UBERON:0006603;9.00e-09;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.99e-12;3!DOID:127;4.99e-12;3!DOID:0060072;3.03e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.99e-12,3;DOID:127,4.99e-12,3;DOID:0060072,3.04e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.21e-33!115;UBERON:0001049!1.70e-16!57;UBERON:0005068!1.70e-16!57;UBERON:0006241!1.70e-16!57;UBERON:0007135!1.70e-16!57;UBERON:0002020!3.72e-15!34;UBERON:0003528!3.72e-15!34;UBERON:0002619!4.12e-15!22;UBERON:0001950!1.64e-14!20;UBERON:0001869!1.75e-14!32;UBERON:0002780!7.71e-14!41;UBERON:0001890!7.71e-14!41;UBERON:0006240!7.71e-14!41;UBERON:0001893!2.06e-13!34;UBERON:0003080!2.10e-13!42;UBERON:0000956!5.64e-13!25;UBERON:0000203!5.64e-13!25;UBERON:0002616!6.98e-13!59;UBERON:0002791!3.68e-12!33;UBERON:0000955!5.38e-10!69;UBERON:0006238!5.38e-10!69;UBERON:0003075!8.90e-10!86;UBERON:0007284!8.90e-10!86;UBERON:0005743!1.35e-09!86;UBERON:0001871!1.89e-09!7;UBERON:0001017!2.01e-09!82;UBERON:0002346!4.50e-09!90;UBERON:0000200!5.74e-09!6;UBERON:0003056!7.64e-09!61;UBERON:0000073!3.90e-08!94;UBERON:0001016!3.90e-08!94;UBERON:0000476!4.51e-08!3;UBERON:0000920!4.51e-08!3;UBERON:0002771!2.02e-07!3;UBERON:0000349!4.39e-07!5;UBERON:0000062!9.58e-07!511;UBERON:0000988!9.94e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.96e-17;2!UBERON:0003124;6.06e-12;3!UBERON:0000920;6.06e-12;3!UBERON:0003975;1.18e-11;18!UBERON:0006834;4.27e-10;1!UBERON:0004175;5.75e-10;21!UBERON:0000996;6.31e-10;1!UBERON:0001136;1.91e-09;1!UBERON:0001343;1.91e-09;1!UBERON:0004910;1.91e-09;1!UBERON:0004813;1.91e-09;1!UBERON:0003296;3.51e-09;4!UBERON:0010133;3.51e-09;4!UBERON:0000474;1.65e-08;37!UBERON:0003133;1.69e-08;44!UBERON:0000995;3.64e-08;17!UBERON:0003134;7.22e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.04e-17,2;UBERON:0007023,5.94e-16,114;UBERON:0003975,2.06e-13,22;UBERON:0003133,9.12e-13,48;UBERON:0005156,1.29e-12,59;UBERON:0000990,1.29e-12,59;UBERON:0000920,8.22e-12,3;UBERON:0004175,9.53e-12,25;UBERON:0003124,3.67e-11,7;UBERON:0003134,2.13e-10,37;UBERON:0000474,2.13e-10,37;UBERON:0006834,4.46e-10,1;UBERON:0000995,6.15e-10,21;UBERON:0000996,6.31e-10,1;UBERON:0001136,1.48e-09,1;UBERON:0001343,1.48e-09,1;UBERON:0004910,1.48e-09,1;UBERON:0005154,1.48e-09,1;UBERON:0005295,1.48e-09,1;UBERON:0004813,1.48e-09,1;UBERON:0005297,1.48e-09,1;UBERON:0005294,1.48e-09,1;UBERON:0010141,1.48e-09,1;UBERON:0005891,1.48e-09,1;UBERON:0005795,1.77e-09,22;UBERON:0003100,2.62e-09,41;UBERON:0004122,2.74e-09,15;UBERON:0003296,3.58e-09,4;UBERON:0010133,3.58e-09,4 | |||
|phase1_expression=0,0,0.563817616383885,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512556597022804,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,1.6068392984416,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,7.90307743103764,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0,0,0,0.296964680832639,0,0.994147647766298,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,6.11589114948988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69396576873162,0,0,0,0,2.23300811812344,0.366390373607449,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,2.42472541221049,0,0.90392296312213,0,0,0.569797163602908,0,0,2.77488893161158,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.209818352539992,0,1.07572403599707,0,0,0,0,3.80099721227599,0,1.30634944043764,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.625954653532499,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0114149657094,0,0,0.128458450192919,0,0.319267718114302,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,1.50420656698514,0,0,0,0,0,0.270150338473579,0,0,0.253663240775627,0,0,0,0,0,0,0,1.21393120847326,2.50428410486427,2.57236873471653,0,0.857440047187092,0.0679697329768317,0.0657727735628491,0,0,6.75040598514421,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,1.43727929598746,0,0,0,0,0,0,0,0,0.308696632431779,0,0,4.6578181133242,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0.5290268405154,0,0.924351257262837,0,0,0,0,0,0,0,0,1.13668047327359,0,0,0,1.70587185520785,0.476128862927481,0.0645889098360061,0,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,0.502055437748735,0,0,0,0,0,0,7.21224520678912,0,4.66029741929859,0.201273793591026,0 | |||
|short_description=p1@ENST00000428100 | |||
}} |
Revision as of 15:53, 22 January 2014
Short description: | p1@ENST00000428100 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000428100_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000428100_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.22e-12 | 3 |
lung fibroblast | 3.74e-10 | 1 |
androgen binding protein secreting cell | 1.48e-09 | 1 |
seminiferous tubule epithelial cell | 1.48e-09 | 1 |
Sertoli cell | 1.48e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.04e-17 | 2 |
adult organism | 5.94e-16 | 114 |
internal female genitalia | 2.06e-13 | 22 |
reproductive organ | 9.12e-13 | 48 |
reproductive structure | 1.29e-12 | 59 |
reproductive system | 1.29e-12 | 59 |
egg chorion | 8.22e-12 | 3 |
internal genitalia | 9.53e-12 | 25 |
chorion | 3.67e-11 | 7 |
female reproductive organ | 2.13e-10 | 37 |
female reproductive system | 2.13e-10 | 37 |
uterus or analog | 4.46e-10 | 1 |
uterus | 6.15e-10 | 21 |
vagina | 6.31e-10 | 1 |
mesothelium | 1.48e-09 | 1 |
seminiferous tubule of testis | 1.48e-09 | 1 |
epithelium of male gonad | 1.48e-09 | 1 |
epithelial cord | 1.48e-09 | 1 |
sex cord | 1.48e-09 | 1 |
seminiferous tubule epithelium | 1.48e-09 | 1 |
testis sex cord | 1.48e-09 | 1 |
genital ridge | 1.48e-09 | 1 |
primitive sex cord of indifferent gonad | 1.48e-09 | 1 |
coelomic epithelium | 1.48e-09 | 1 |
embryonic uterus | 1.77e-09 | 22 |
female organism | 2.62e-09 | 41 |
genitourinary system | 2.74e-09 | 15 |
gland of diencephalon | 3.58e-09 | 4 |
neuroendocrine gland | 3.58e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.99e-12 | 3 |
leiomyoma | 4.99e-12 | 3 |
benign neoplasm | 3.04e-09 | 4 |