FFCP PHASE1:Hg19::chr7:94059736..94059747,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:94059736..94059747,+ | |||
|id=chr7:94059736..94059747,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.15e-32!180;CL:0000057!5.34e-20!75;CL:0000680!1.45e-19!57;CL:0000056!1.45e-19!57;CL:0000355!1.45e-19!57;CL:0000187!2.34e-17!54;CL:0000183!7.95e-16!59;CL:0000393!2.17e-14!60;CL:0000211!2.17e-14!60;CL:0000192!3.47e-12!42;CL:0000514!3.47e-12!42;CL:0002494!1.15e-10!16;CL:0002620!2.84e-09!23;CL:0000048!5.55e-09!430;CL:0000723!2.01e-08!436;CL:0000034!5.29e-08!444;CL:0000359!5.58e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0000135;9.92e-10;3!CL:0000388;9.92e-10;3!CL:0000197;3.02e-09;6!CL:0000098;3.02e-09;6!CL:0002167;3.02e-09;6!CL:0000499;1.19e-08;28!CL:0000056;6.54e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,6.56e-10,3;CL:0000388,6.56e-10,3;CL:0000057,2.49e-09,76;CL:0000197,2.95e-09,6;CL:0000098,2.95e-09,6;CL:0002167,2.95e-09,6;CL:0000499,7.14e-09,28;CL:0000680,9.50e-09,58;CL:0000056,9.50e-09,58;CL:0000355,9.50e-09,58;CL:0000515,4.88e-07,4;CL:0000187,5.53e-07,55;CL:0000327,9.13e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000515;6.54e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!3.86e-20!61;UBERON:0002036!3.86e-20!61;UBERON:0003082!3.86e-20!61;UBERON:0002385!4.87e-19!63;UBERON:0001015!4.87e-19!63;UBERON:0000383!4.87e-19!63;UBERON:0000914!9.01e-19!83;UBERON:0002329!9.01e-19!83;UBERON:0003077!9.01e-19!83;UBERON:0003059!9.01e-19!83;UBERON:0007282!9.01e-19!83;UBERON:0009618!9.01e-19!83;UBERON:0007285!9.01e-19!83;UBERON:0004290!1.65e-18!70;UBERON:0000486!9.60e-16!82;UBERON:0000948!3.37e-11!24;UBERON:0005498!3.37e-11!24;UBERON:0004140!3.37e-11!24;UBERON:0009881!3.37e-11!24;UBERON:0004141!3.37e-11!24;UBERON:0003084!3.37e-11!24;UBERON:0007005!3.37e-11!24;UBERON:0004139!3.37e-11!24;UBERON:0004291!3.37e-11!24;UBERON:0005256!1.94e-10!143;UBERON:0007100!2.60e-09!27;UBERON:0004872!2.00e-08!84;UBERON:0002100!9.19e-08!216;UBERON:0000490!3.54e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;9.92e-10;3!UBERON:0000043;9.92e-10;3!UBERON:0007845;9.92e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.67e-10,62;UBERON:0002036,1.67e-10,62;UBERON:0003082,1.67e-10,62;UBERON:0002385,4.81e-10,64;UBERON:0001015,4.81e-10,64;UBERON:0000383,4.81e-10,64;UBERON:0007846,6.56e-10,3;UBERON:0000043,6.56e-10,3;UBERON:0007845,6.56e-10,3;UBERON:0007524,1.66e-09,73;UBERON:0000486,8.33e-09,83;UBERON:0002329,1.20e-08,71;UBERON:0003059,1.20e-08,71;UBERON:0007282,1.20e-08,71;UBERON:0004290,1.20e-08,71;UBERON:0009618,1.20e-08,71;UBERON:0003077,1.80e-08,72;UBERON:0007285,1.80e-08,72;UBERON:0007503,1.64e-07,78 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.986680828671798,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0.12786256184353,0.722878304769133,0,1.59331170856906,0,3.89307896242109,0.189069634328136,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4666914686485,0.25326102332916,0,0.573673241497627,0.709336764396714,1.12135520028461,1.06748995729705,0.49333509683432,0.311211035399766,0.134710672069688,0.653847612453835,0.605429710579726,2.88087962239999,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0.103325781175765,1.18800285728205,1.7308685049499,0,0,0,0.125118519871964,0.277064115484183,0,1.22595118319608,0.45071417671979,0.226864366320042,0.89694817844431,1.2813443329114,0.423863802319124,2.10063767259082,0.206105058476878,0.772921620136887,0.37223371266318,2.53164498361899,0.194874010322397,1.00973509697646,0.368199594569197,0.161646056818812,0.710019185033229,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,0,0,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,1.42636905040718,1.44781306667579,1.2328579353023,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,11.0224556611328,7.67244651827796,4.41566762095017,7.02848489956279,0.601892199455438,0,0,0.664225598535437,3.13427586520895,0,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0.496215615637554,1.99500565274481,2.80660094433074,2.17836553734692,0.511707249066704,2.89537058058494,0,0.308419387605311,0.887808626565635,0.246381468041427,0,0,0,0,0,0.574072240823034,1.27463817604702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0.537101224341368,1.0151168573996,0.426133137080504,0.801288320820636,0,0,0,0,0.464845549297286,0.94443704049192,0,0,0,0.869932992075073,0.18532421910392,0,1.116475108079,0.632758849437452,0.762520775695299,0.255897791311334,4.2793898803392,0,0.78494864019923,1.2591072030832,1.09814811894422,0.589062011728432,0.404364963146632,1.58510321173008,0.421258456238981,0.48763373908959,0.243713489631284,0,0,1.41405431953713,1.13008116620243,1.10273068709225,0,0,0.578775534266688,1.9676842561399,1.42037263873893,0,0.563391205064483,0,0.0982490410131212,1.07001315444375,0,1.47775344708365,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,4.01288823649394,0,0,0,0,0.789168805698781,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.343972064943233,0,0,0,0,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.201550417460179,8.64719720501769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.851940108927109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0,0,0.889811221596536,0.228840068396924,0.151230923763239,0.466311601748341,0,0.159296767163702,0.449803112163605,0,0.829412415681711,0.797525143673985,0,0.150257608997218,1.14241563650639,0.406870733204662,0.181848659202559,0,0.464033759878494,0.398095888698616,0,1.37358282073117,2.02049693259551,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31043939538565,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,3.17408349321616,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,3.05105676373734,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0.348724276104376,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,6.31424290976881,0,0,0,0,0,0,0,1.31135736302374,0,0,0,0.196308467114945,0,2.113278637917,1.86919826156599,0.0939839179798536,0,0,0,0,0,3.65168194123259,0,0,0,0,0.872701380680755,1.0580536810308,2.23197010900051,1.84870251452567,2.16313281061895,0,0,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,3.57096647195611,0,0.0620747142958579,0.224263725161227,0,2.22328907854041,0,1.71116650542641,0,0.0717222053926763,4.324584635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| |||
|short_description=p@chr7:94059736..94059747,+ | |||
}} |
Revision as of 17:59, 22 January 2014
Short description: | p@chr7:94059736..94059747, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr7:94059736..94059747, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 6.56e-10 | 3 |
tendon cell | 6.56e-10 | 3 |
fibroblast | 2.49e-09 | 76 |
receptor cell | 2.95e-09 | 6 |
sensory epithelial cell | 2.95e-09 | 6 |
olfactory epithelial cell | 2.95e-09 | 6 |
stromal cell | 7.14e-09 | 28 |
muscle precursor cell | 9.50e-09 | 58 |
myoblast | 9.50e-09 | 58 |
multi-potent skeletal muscle stem cell | 9.50e-09 | 58 |
skeletal muscle myoblast | 4.88e-07 | 4 |
muscle cell | 5.53e-07 | 55 |
extracellular matrix secreting cell | 9.13e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.67e-10 | 62 |
striated muscle tissue | 1.67e-10 | 62 |
myotome | 1.67e-10 | 62 |
muscle tissue | 4.81e-10 | 64 |
musculature | 4.81e-10 | 64 |
musculature of body | 4.81e-10 | 64 |
dense regular connective tissue | 6.56e-10 | 3 |
tendon | 6.56e-10 | 3 |
regular connective tissue | 6.56e-10 | 3 |
dense mesenchyme tissue | 1.66e-09 | 73 |
multilaminar epithelium | 8.33e-09 | 83 |
somite | 1.20e-08 | 71 |
presomitic mesoderm | 1.20e-08 | 71 |
presumptive segmental plate | 1.20e-08 | 71 |
dermomyotome | 1.20e-08 | 71 |
trunk paraxial mesoderm | 1.20e-08 | 71 |
paraxial mesoderm | 1.80e-08 | 72 |
presumptive paraxial mesoderm | 1.80e-08 | 72 |
epithelial vesicle | 1.64e-07 | 78 |