FFCP PHASE1:Hg19::chr8:42552533..42552542,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1142 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1963 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=14bp_to_ENST00000531610,ENST00000534391_5end | |||
|description=CAGE_peak_3_at_CHRNB3_5end | |||
|id=chr8:42552533..42552542,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.35e-18;3!UBERON:0003056;1.03e-17;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!7.81e-30!86;UBERON:0007284!7.81e-30!86;UBERON:0001049!1.04e-29!57;UBERON:0005068!1.04e-29!57;UBERON:0006241!1.04e-29!57;UBERON:0007135!1.04e-29!57;UBERON:0002020!2.20e-29!34;UBERON:0003528!2.20e-29!34;UBERON:0002616!1.31e-28!59;UBERON:0002346!2.41e-28!90;UBERON:0002619!3.92e-27!22;UBERON:0001869!1.24e-26!32;UBERON:0005743!1.93e-26!86;UBERON:0001893!5.49e-25!34;UBERON:0001017!7.09e-25!82;UBERON:0001950!3.19e-24!20;UBERON:0000956!8.21e-24!25;UBERON:0000203!8.21e-24!25;UBERON:0000955!1.18e-23!69;UBERON:0006238!1.18e-23!69;UBERON:0000073!1.27e-23!94;UBERON:0001016!1.27e-23!94;UBERON:0002791!1.57e-21!33;UBERON:0002780!1.87e-20!41;UBERON:0001890!1.87e-20!41;UBERON:0006240!1.87e-20!41;UBERON:0003080!6.28e-20!42;UBERON:0003056!2.48e-18!61;UBERON:0000200!4.53e-18!6;UBERON:0007023!3.59e-17!115;UBERON:0000153!2.15e-16!129;UBERON:0007811!2.15e-16!129;UBERON:0000033!1.62e-15!123;UBERON:0002360!9.74e-15!2;UBERON:0000094!9.74e-15!2;UBERON:0007645!9.74e-15!2;UBERON:0002148!2.70e-14!2;UBERON:0009662!2.70e-14!2;UBERON:0004733!6.57e-14!12;UBERON:0002028!6.57e-14!12;UBERON:0007277!6.57e-14!12;UBERON:0004121!4.65e-13!169;UBERON:0004732!7.96e-13!13;UBERON:0001872!1.02e-12!5;UBERON:0000924!1.14e-12!173;UBERON:0006601!1.14e-12!173;UBERON:0002680!2.17e-12!9;UBERON:0001895!2.17e-12!9;UBERON:0010092!2.17e-12!9;UBERON:0003076!4.33e-11!15;UBERON:0003057!4.33e-11!15;UBERON:0002771!6.00e-10!3;UBERON:0000988!7.85e-10!3;UBERON:0006331!7.85e-10!3;UBERON:0000064!3.01e-09!219;UBERON:0002363!3.34e-08!1;UBERON:0007647!3.34e-08!1;UBERON:0010115!3.34e-08!1;UBERON:0007190!3.58e-08!1;UBERON:0002022!5.79e-08!1;UBERON:0002298!6.41e-08!8;UBERON:0000483!7.31e-08!309;UBERON:0002581!8.12e-08!1;UBERON:0000119!9.63e-08!312;UBERON:0002902!9.94e-08!1;UBERON:0009899!9.94e-08!1;UBERON:0001882!1.06e-07!1;UBERON:0005403!1.06e-07!1;UBERON:0000025!1.74e-07!194;UBERON:0002308!4.24e-07!9;UBERON:0000125!4.24e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;3.42e-11;5!UBERON:0005388;3.42e-11;5!UBERON:0001802;3.42e-11;5!UBERON:0000970;5.70e-11;20!UBERON:0002104;1.69e-10;21!UBERON:0000020;1.12e-09;23!UBERON:0002037;1.27e-09;6!UBERON:0001032;2.56e-09;24!UBERON:0004456;2.56e-09;24!UBERON:0002680;7.69e-07;9!UBERON:0001895;7.69e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.69e-10,21;UBERON:0002104,1.69e-10,21;UBERON:0002037,1.32e-09,6;UBERON:0006215,1.32e-09,6;UBERON:0000966,1.57e-09,6;UBERON:0005388,1.57e-09,6;UBERON:0001802,1.57e-09,6;UBERON:0000020,2.56e-09,24;UBERON:0001032,2.56e-09,24;UBERON:0004456,2.56e-09,24;UBERON:0002680,7.91e-07,9;UBERON:0001895,7.91e-07,9;UBERON:0010092,7.91e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.541607727530031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32216445855572,0.591095237907095,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48578814858586,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.253663240775627,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,1.35805433935647,0,1.51113852978563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@CHRNB3 | |||
}} |
Revision as of 21:54, 22 January 2014
Short description: | p3@CHRNB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHRNB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000531610, ENST00000534391_5end |
EntrezGene: | CHRNB3 |
HGNC: | 1963 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.69e-10 | 21 |
visual system | 1.69e-10 | 21 |
cerebellum | 1.32e-09 | 6 |
rhombic lip | 1.32e-09 | 6 |
retina | 1.57e-09 | 6 |
photoreceptor array | 1.57e-09 | 6 |
posterior segment of eyeball | 1.57e-09 | 6 |
sense organ | 2.56e-09 | 24 |
sensory system | 2.56e-09 | 24 |
entire sense organ system | 2.56e-09 | 24 |
regional part of metencephalon | 7.91e-07 | 9 |
metencephalon | 7.91e-07 | 9 |
future metencephalon | 7.91e-07 | 9 |