FFCP PHASE1:Hg19::chr8:71520485..71520511,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23471 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20568 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=62bp_to_ENST00000521049_5end | |||
|coexpression_cluster_id=C4769 | |||
|description=CAGE_peak_4_at_TRAM1_5end | |||
|id=chr8:71520485..71520511,- | |||
|ontology_enrichment_celltype=CL:0000063!1.94e-08!578;CL:0000548!2.79e-08!679;CL:0000004!2.79e-08!679;CL:0000255!2.79e-08!679;CL:0000012!6.36e-08!682 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.64e-12!169;UBERON:0000925!2.64e-12!169;UBERON:0006595!2.64e-12!169;UBERON:0001007!3.66e-12!155;UBERON:0001555!3.66e-12!155;UBERON:0007026!3.66e-12!155;UBERON:0003929!1.23e-10!54;UBERON:0005911!4.69e-09!82;UBERON:0004921!1.55e-08!129;UBERON:0004185!1.55e-08!129;UBERON:0000077!3.43e-07!130;UBERON:0000161!7.81e-07!35 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.23e-12,160;UBERON:0000925,5.23e-12,160;UBERON:0006595,5.23e-12,160;UBERON:0001007,9.71e-12,145;UBERON:0001555,9.71e-12,145;UBERON:0007026,9.71e-12,145;UBERON:0003929,1.22e-10,54;UBERON:0005911,4.73e-09,82;UBERON:0004921,7.29e-08,118;UBERON:0000161,3.34e-07,36 | |||
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| |||
|short_description=p4@TRAM1 | |||
}} |
Revision as of 22:28, 22 January 2014
Short description: | p4@TRAM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRAM1_5end |
Coexpression cluster: | C4769_Nucleus_normal_Urothelial_Prostate_Mesenchymal_lung_Fibroblast |
Association with transcript: | 62bp_to_ENST00000521049_5end |
EntrezGene: | TRAM1 |
HGNC: | 20568 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.23e-12 | 160 |
endoderm | 5.23e-12 | 160 |
presumptive endoderm | 5.23e-12 | 160 |
digestive system | 9.71e-12 | 145 |
digestive tract | 9.71e-12 | 145 |
primitive gut | 9.71e-12 | 145 |
gut epithelium | 1.22e-10 | 54 |
endo-epithelium | 4.73e-09 | 82 |
subdivision of digestive tract | 7.29e-08 | 118 |
orifice | 3.34e-07 | 36 |