FFCP PHASE1:Hg19::chr9:16870659..16870675,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54796 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30988 | |||
|TSSclassifier=strong | |||
|UniProt=Q06HC1,Q06HC4 | |||
|association_with_transcript=0bp_to_ENST00000436939,ENST00000456672_5end | |||
|description=CAGE_peak_2_at_BNC2_5end | |||
|id=chr9:16870659..16870675,- | |||
|ontology_enrichment_celltype=CL:0000055!2.54e-24!180;CL:0000057!3.04e-13!75;CL:0000680!2.36e-10!57;CL:0000056!2.36e-10!57;CL:0000355!2.36e-10!57;CL:0000183!7.79e-10!59;CL:0000187!2.04e-09!54;CL:0000393!1.37e-08!60;CL:0000211!1.37e-08!60;CL:0000499!2.29e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000188;4.00e-08;9!CL:0000499;2.31e-07;28!CL:0000327;5.25e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.26e-13,76;CL:0000680,4.49e-11,58;CL:0000056,4.49e-11,58;CL:0000355,4.49e-11,58;CL:0000187,6.30e-10,55;CL:0000393,4.19e-09,61;CL:0000211,4.19e-09,61;CL:0000188,2.88e-08,9;CL:0000499,1.75e-07,28;CL:0000327,3.91e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.32e-14!83;UBERON:0002329!1.32e-14!83;UBERON:0003077!1.32e-14!83;UBERON:0003059!1.32e-14!83;UBERON:0007282!1.32e-14!83;UBERON:0009618!1.32e-14!83;UBERON:0007285!1.32e-14!83;UBERON:0004290!1.29e-12!70;UBERON:0002385!8.98e-12!63;UBERON:0001015!8.98e-12!63;UBERON:0000383!8.98e-12!63;UBERON:0001134!3.77e-11!61;UBERON:0002036!3.77e-11!61;UBERON:0003082!3.77e-11!61;UBERON:0000486!3.51e-10!82;UBERON:0005256!2.26e-08!143;UBERON:0003102!8.41e-07!95;UBERON:0002200!8.47e-07!11;UBERON:0006876!8.47e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.30e-09;16!UBERON:0002036;1.30e-09;16!UBERON:0002385;5.98e-09;31!UBERON:0001015;5.98e-09;31!UBERON:0000383;5.98e-09;31!UBERON:0006876;3.67e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.48e-12,73;UBERON:0002385,1.76e-12,64;UBERON:0001015,1.76e-12,64;UBERON:0000383,1.76e-12,64;UBERON:0002329,2.01e-12,71;UBERON:0003059,2.01e-12,71;UBERON:0007282,2.01e-12,71;UBERON:0004290,2.01e-12,71;UBERON:0009618,2.01e-12,71;UBERON:0003077,4.91e-12,72;UBERON:0007285,4.91e-12,72;UBERON:0001134,1.02e-11,62;UBERON:0002036,1.02e-11,62;UBERON:0003082,1.02e-11,62;UBERON:0007503,6.53e-11,78;UBERON:0000486,5.93e-10,83;UBERON:0003104,1.51e-09,160;UBERON:0009142,1.51e-09,160;UBERON:0005256,2.28e-09,122;UBERON:0006876,2.23e-08,11;UBERON:0002204,7.56e-07,167 | |||
|phase1_expression=0.726713517082227,1.49870366723688,0.422863212287913,0,1.34088328328186,2.61701557230111,2.53299878168311,1.26343974685366,1.30592814099919,0,0,2.83973783769224,0.263766978228454,6.43585035392242,9.61052389610956,0.672325146451775,2.41077811209591,0,0.975865597581014,2.70866327768933,2.44800829493104,3.76145665773705,0.286235987131057,0,0.502170558379211,0.840547463227464,0.328402357799783,0.236132343941038,0,0,0.77408061658038,0,0,0,0,0,0,0.553995408531877,0,0,0.895661896959697,1.94336199611388,0.515151135268373,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.511450247374121,5.06014813338393,3.00802746381534,1.59331170856906,9.54343136461319,1.94653948121054,5.57755421268,5.32150553910154,6.4119393555982,3.92937226493138,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.825354125820202,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0.225222960966644,1.53316637465883,0,0,0,0,0,3.97577561356255,1.01304409331664,6.09082231740807,24.667949384398,3.19201543978521,2.24271040056923,0,0.24666754841716,6.22422070799533,1.21239604862719,2.61539044981534,13.6221684880438,15.55674996096,1.17160715916898,2.49728061464256,1.1409436430889,0.149448680551801,0.704606991862589,1.13311061057692,0.842704840213491,3.0623125688234,3.0708579327942,2.78979609174567,3.56400857184616,1.23633464639278,0,1.43723628363248,3.03005005117319,3.1279629967991,1.10825646193673,3.5118209670467,1.5324389789951,1.95309476578576,0.226864366320042,2.87023417102179,2.34913127700424,4.66250182551036,4.80145753735044,4.43125875725287,3.86460810068444,1.30281799432113,1.18143432568886,0.779496041289589,6.56327813034698,2.11714766877288,10.6686397500416,2.4850671476163,0.604512589365842,2.88253006927829,0,0,0,1.21973706129595,2.12047629314376,0.464775771478074,0.932949495138334,0.756962552626885,0.72995471815166,4.69348596989448,3.21620469096443,1.38134921352481,2.3218396401599,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,5.7620361586396,7.3504355692771,0,0,0,0,0,1.88724591328378,0.219500570817251,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,4.3299402607582,0.695582429850461,1.99594780200897,0,0,0,0,0,1.72351904261178,0,0,0,0,0.283550194484773,0,0,0,23.6478354190053,6.86777785303163,3.10992173311158,2.88239906833923,4.16600030307054,1.07946420296687,1.14596527667483,3.51652341630141,0,2.77634230298973,1.20137223137567,4.85904935471983,4.37311228946907,6.10344096366592,1.98013371716565,2.19761916788222,3.57656445851882,0,2.12750493267896,1.04007436911366,1.80045161983499,0,2.93064396917709,2.43062589218851,1.62786481617433,1.64648067356154,0.977208552881205,2.13235169245527,0.791951872933429,2.71295439353627,0.871533458600294,2.7992437530976,2.43247561282381,2.51128545716063,0,1.4377491329495,4.59447743336456,2.85273810081437,1.30303176000821,4.31500277355805,3.04403637507822,0.112085143993527,0.197030760201927,0.431255149719035,1.54011643535698,0,0,0,0,0,0,0,0,6.50264906111441,2.00068208423871,5.69656549769445,2.28767947683888,3.56857977594324,2.68094105557689,2.81139395982512,1.50473049863859,0,1.03473071292505,5.97803038681893,1.84369168541703,3.0409265063829,3.52442083432933,5.14715135716284,0,0.215714200818617,0.106727557803444,0.303127571446259,1.66435439510497,1.20956117331872,0.744323423456331,1.84154367945675,0.841980283299221,0.384417447767103,1.02341449813341,0.482561763430822,0,2.31314540703983,2.66342587969691,2.7101961484557,1.03850885836724,2.67283870457906,0,0,0,2.98517565227978,2.73136752010076,5.11385218341754,0,0.0770153371044148,0,0,0.211103257785751,0,0,1.0795795805107,0,1.08378575017541,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,0,4.35018232314549,4.46740989632469,5.37262861541453,3.58375088459779,14.2868925674804,9.71611849225331,6.98858344812027,5.16385806751077,0,0,0,0,0.929691098594572,4.09256050879832,1.3940745403212,0.924100740528266,0,0,0.18532421910392,0.429374660225974,6.69885064847401,4.42931194606216,3.0500831027812,3.32667128704734,9.41465773674625,3.81843897511124,0,8.27413304883248,7.13796277313742,6.00843251963001,0.202182481573316,0,0.421258456238981,1.46290121726877,1.46228093778771,1.05650146756755,3.68549760801562,5.93902814205594,4.52032466480971,1.65409603063837,0,0,1.73632660280006,3.27947376023316,0.202910376962704,1.239293992399,1.97186921772569,1.43411352204052,2.55447506634115,0,1.77380532035299,4.43326034125095,4.61012850143863,1.51789269506286,1.74967360122491,0,0,0,0.941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,1.46508179271894,0.485442086998054,0,0,0,0,0,0,0,1.11308705022906,0,14.1454023445756,2.19172787076177,1.65770349318689,0,0.511343412510774,0,0.622079175323615,0,0,0,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| |||
|short_description=p2@BNC2 | |||
}} |
Revision as of 00:57, 23 January 2014
Short description: | p2@BNC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BNC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000436939, ENST00000456672_5end |
EntrezGene: | BNC2 |
HGNC: | 30988 |
UniProt: | Q06HC1Q06HC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.26e-13 | 76 |
muscle precursor cell | 4.49e-11 | 58 |
myoblast | 4.49e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.49e-11 | 58 |
muscle cell | 6.30e-10 | 55 |
electrically responsive cell | 4.19e-09 | 61 |
electrically active cell | 4.19e-09 | 61 |
cell of skeletal muscle | 2.88e-08 | 9 |
stromal cell | 1.75e-07 | 28 |
extracellular matrix secreting cell | 3.91e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.48e-12 | 73 |
muscle tissue | 1.76e-12 | 64 |
musculature | 1.76e-12 | 64 |
musculature of body | 1.76e-12 | 64 |
somite | 2.01e-12 | 71 |
presomitic mesoderm | 2.01e-12 | 71 |
presumptive segmental plate | 2.01e-12 | 71 |
dermomyotome | 2.01e-12 | 71 |
trunk paraxial mesoderm | 2.01e-12 | 71 |
paraxial mesoderm | 4.91e-12 | 72 |
presumptive paraxial mesoderm | 4.91e-12 | 72 |
skeletal muscle tissue | 1.02e-11 | 62 |
striated muscle tissue | 1.02e-11 | 62 |
myotome | 1.02e-11 | 62 |
epithelial vesicle | 6.53e-11 | 78 |
multilaminar epithelium | 5.93e-10 | 83 |
mesenchyme | 1.51e-09 | 160 |
entire embryonic mesenchyme | 1.51e-09 | 160 |
trunk mesenchyme | 2.28e-09 | 122 |
vasculature of organ | 2.23e-08 | 11 |
musculoskeletal system | 7.56e-07 | 167 |