FFCP PHASE1:Hg19::chrX:27417088..27417131,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000422048,uc004dbt.2_5end | |||
|description=CAGE_peak_1_at_ENST00000422048_5end,CAGE_peak_1_at_uc004dbt.2_5end | |||
|id=chrX:27417088..27417131,- | |||
|ontology_enrichment_celltype=CL:0000066!3.44e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002149;4.17e-11;6!CL:0002255;4.17e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.41e-12,253;CL:0002149,3.50e-11,6;CL:0002255,3.50e-11,6;CL:0000223,1.57e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0007123;7.02e-07;5 | |||
|ontology_enrichment_disease=DOID:0050687!4.50e-33!143;DOID:305!3.70e-31!106;DOID:162!1.07e-30!235;DOID:14566!8.08e-30!239;DOID:299!3.79e-12!25;DOID:0050686!6.80e-09!137;DOID:7!9.05e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:299;1.24e-14;25!DOID:305;3.63e-11;106!DOID:3001;4.17e-11;6!DOID:0050687;4.40e-10;143!DOID:7;1.85e-07;39!DOID:1749;2.42e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.10e-38,143;DOID:305,1.89e-37,106;DOID:162,1.33e-35,235;DOID:14566,2.03e-34,239;DOID:299,1.04e-14,25;DOID:3001,3.50e-11,6;DOID:0050686,1.38e-09,137;DOID:7,2.99e-09,39;DOID:1749,2.62e-07,14;DOID:120,9.82e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0002368!9.44e-09!35;UBERON:0001737!5.62e-08!9;UBERON:0000949!1.81e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002368;8.78e-11;33!UBERON:0003296;8.48e-09;4!UBERON:0010133;8.48e-09;4!UBERON:0002046;7.02e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002368,6.51e-11,35;UBERON:0003296,8.50e-09,4;UBERON:0010133,8.50e-09,4;UBERON:0000949,8.71e-09,45;UBERON:0002046,6.02e-07,5;UBERON:0004117,6.02e-07,5;UBERON:0007689,6.02e-07,5;UBERON:0007123,6.02e-07,5;UBERON:0003091,6.02e-07,5;UBERON:0005911,9.50e-07,82;UBERON:0001737,9.87e-07,9 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,1.00267582127178,0,0,0,0,0.221729397462564,0,3.47094550068939,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.709840800239063,2.36018566109342,2.6511213287183,2.75734931830985,0.653638332277218,0.71181185733329,2.29213223872279,1.56977172100277,2.69323009862473,0,0,0,0,0,0,0.590789906681404,0,5.16551441881077,0,0,0,0.301586917234893,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86750238693191,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,3.40035338437484,2.38080608527693,4.04296549610881,0,0,0,0,0,0,0,0.214840489736547,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81239927631679,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,2.15068535015921,0.447352215784832,1.50164227540718,0,0,3.69262196843137,4.32729085561573,0.66614393599564,0,2.61996756571508,0.293016358543788,3.51945513073589,0,0,0.95497793895076,0,0.614321404198464,0,0,21.1486539543521,0,0,0.597743964753209,0.552567831062295,0,0,0,0,0,1.07412704805365,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,3.41380344856499,10.1701460117107,0.472775363535873,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,20.2625542145322,5.99522100397994,0.153900517007594,14.4706410925692,0,2.06442582142476,6.19290019955446,4.78501739597879,1.37396390102793,2.66517388009317,0,0.31396051279005,0.166211681900156,0,0,0,6.64138064534648,0.476809736941136,16.8798451622422,6.8557779426842,1.69623685720729,24.6683049305984,0,0,0,0,0,0,0.134802265961354,0.802577647298789,0.234264445725339,0,0.19566461893209,0,0,0,0,0.252746318513952,0.901940516486955,0.103688191397247,0,0,0,0,13.6612582094301,1.8027707491708,1.04135843001079,0,0,0,8.42731559110921,3.48322792640707,3.21592995179216,2.29923279748986,0,0,0,5.48167698587004,4.17300684576278,0.0633107959558787,0,4.24841747333129,0,5.99428828746391,0,0,6.52060991875465,0,0,0,8.96967760085853,7.11299354923866,0.611989305817931,11.2690730061592,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0.268733889946905,0,3.49487848582361,2.6786281984456,2.47247575143499,3.1005630172925,0.295282444544246,0,0,0,0,0,0,0,0,0.425246896606173,4.69608562638973,0.236417121897595,0.367182116944987,1.26720403823288,0.537862017998534,0,0,0.662091970365432,5.085370753095,0,0,0,3.59190574687462,1.8881279772348,0.170388021785422,0.113312091520126,0.146552233678082,0,0.129282956361551,0,0,7.04815022316672,0,0,0.414239055347196,0,0.197611631897944,0,1.91502377331055,1.08803560673895,0.5013797880454,1.83807346058077,0.983617892129413,7.38154252376101,0,0.122026264901963,0,0,0.332787154610557,0.18628920882415,0,0.37494122388632,0,15.4151280114282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0,0,0,0,0,0,0.909243296012797,0,0,0,0,0,0,0,11.5571898244382,1.92997432237433,7.30784017502592,0,0,13.7052554523622,4.65630986811867,1.85280868296583,0,0,0,0.168942440653073,0,0,0,0,0.194860308839388,0,0,2.6208787907713,0.983091635014877,0.211312123358627,0,0.213383459388282,0.688859918643263,0,2.39337735327393,0,0,0.255788742607303,0,0,0.982886743728125,0,0,0,0.558644917973244,0,0.23658523500376,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.0691572524642179,0,0,2.45369296252564,5.42660727399606,0,0,0.381382095467167,0,0.397832444232549,0.150420656698515,2.42046082444224,0,6.28576066755414,7.20596437044426,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0.351742488719241,0,3.74991285114801,3.02655349996942,7.89055285507621,7.05752793189023,6.83008250252319,0.115233987555779,0,0.135939465953663,0,9.33731342983349,0.889851215136553,0,0,0,0,0.431855182437243,2.38875843943525,0.428859265059938,0.316027223465453,10.3454868577631,0,0,0,0,0,0.430227358820278,0,0.0852134047591577,0,2.52017555398455,6.82454048461504,2.8666168169323,1.56597604516909,0,0.243835849964539,0,0,0,0,0.233939463462106,0.994753875806841,3.32976254177192,0.5647304101948,0.109940516745429,1.20770274853339,0,0.218559560503957,0,0,0,0.588925401344836,0,0.4226557275834,0.1699271146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| |||
|short_description=p1@ENST00000422048,p1@uc004dbt.2 | |||
}} |
Revision as of 05:08, 23 January 2014
Short description: | p1@ENST00000422048, p1@uc004dbt.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000422048_5end, CAGE_peak_1_at_uc004dbt.2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000422048, uc004dbt.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.41e-12 | 253 |
epithelial cell of uterus | 3.50e-11 | 6 |
stromal cell of endometrium | 3.50e-11 | 6 |
endodermal cell | 1.57e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
endocrine gland | 6.51e-11 | 35 |
gland of diencephalon | 8.50e-09 | 4 |
neuroendocrine gland | 8.50e-09 | 4 |
endocrine system | 8.71e-09 | 45 |
thyroid gland | 6.02e-07 | 5 |
pharyngeal pouch | 6.02e-07 | 5 |
thyroid diverticulum | 6.02e-07 | 5 |
pharyngeal pouch 2 | 6.02e-07 | 5 |
thyroid primordium | 6.02e-07 | 5 |
endo-epithelium | 9.50e-07 | 82 |
larynx | 9.87e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.10e-38 | 143 |
carcinoma | 1.89e-37 | 106 |
cancer | 1.33e-35 | 235 |
disease of cellular proliferation | 2.03e-34 | 239 |
adenocarcinoma | 1.04e-14 | 25 |
female reproductive endometrioid cancer | 3.50e-11 | 6 |
organ system cancer | 1.38e-09 | 137 |
disease of anatomical entity | 2.99e-09 | 39 |
squamous cell carcinoma | 2.62e-07 | 14 |
female reproductive organ cancer | 9.82e-07 | 27 |